RNA–Protein interactions for RNA: ENST00000511032.5

DHFR-205, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-205ENST00000511032 ZBED9Q6R2W3 1325 aa14.24□□□□□ -0.13
DHFR-205ENST00000511032 PRR36Q9H6K5 1346 aa14.24□□□□□ -0.13
DHFR-205ENST00000511032 PROSER2Q86WR7 435 aaPredicted RBP14.24□□□□□ -0.13
DHFR-205ENST00000511032 POLR3AO14802 1390 aaPredicted RBP14.24□□□□□ -0.13
DHFR-205ENST00000511032 NCOA3Q9Y6Q9 1424 aa14.23□□□□□ -0.13
DHFR-205ENST00000511032 NUTM2FA1L443 756 aa14.23□□□□□ -0.13
DHFR-205ENST00000511032 FYB1O15117 783 aa14.23□□□□□ -0.13
DHFR-205ENST00000511032 HSPA2P54652 639 aa14.23□□□□□ -0.13
DHFR-205ENST00000511032 NGDNQ8NEJ9 315 aaKnown RBP14.23□□□□□ -0.13
DHFR-205ENST00000511032 GGNBP2Q9H3C7 697 aa14.23□□□□□ -0.13
DHFR-205ENST00000511032 ACEP12821 1306 aa14.22□□□□□ -0.13
DHFR-205ENST00000511032 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.22□□□□□ -0.13
DHFR-205ENST00000511032 COG3Q96JB2 828 aa14.22□□□□□ -0.13
DHFR-205ENST00000511032 TTC21AQ8NDW8 1320 aa14.22□□□□□ -0.13
DHFR-205ENST00000511032 TNNT2P45379 298 aaPredicted RBP14.21□□□□□ -0.13
DHFR-205ENST00000511032 USP6P35125 1406 aa14.21□□□□□ -0.14
DHFR-205ENST00000511032 SLC4A2P04920 1241 aa14.19□□□□□ -0.14
DHFR-205ENST00000511032 NUDCQ9Y266 331 aa14.19□□□□□ -0.14
DHFR-205ENST00000511032 NRKQ7Z2Y5 1582 aa14.19□□□□□ -0.14
DHFR-205ENST00000511032 RGPD8O14715 1765 aaPredicted RBP14.19□□□□□ -0.14
DHFR-205ENST00000511032 MTHFSP49914 203 aa14.18□□□□□ -0.14
DHFR-205ENST00000511032 C19orf44Q9H6X5 657 aa14.18□□□□□ -0.14
DHFR-205ENST00000511032 DCCP43146 1447 aa14.18□□□□□ -0.14
DHFR-205ENST00000511032 BLMP54132 1417 aaPredicted RBP14.18□□□□□ -0.14
DHFR-205ENST00000511032 ATF3P18847 181 aa14.18□□□□□ -0.14
DHFR-205ENST00000511032 PMFBP1Q8TBY8 1022 aa14.18□□□□□ -0.14
DHFR-205ENST00000511032 TTC21BQ7Z4L5 1316 aa14.17□□□□□ -0.14
DHFR-205ENST00000511032 STRCQ7RTU9 1775 aa14.17□□□□□ -0.14
DHFR-205ENST00000511032 NGEFQ8N5V2 710 aa14.17□□□□□ -0.14
DHFR-205ENST00000511032 PHF8Q9UPP1 1060 aa14.17□□□□□ -0.14
DHFR-205ENST00000511032 FBXO41Q8TF61 875 aa14.16□□□□□ -0.14
DHFR-205ENST00000511032 MSH6P52701 1360 aa14.16□□□□□ -0.14
DHFR-205ENST00000511032 AATKQ6ZMQ8 1374 aa14.16□□□□□ -0.14
DHFR-205ENST00000511032 KIF1AQ12756 1690 aa14.15□□□□□ -0.14
DHFR-205ENST00000511032 CADPS2Q86UW7 1296 aa14.15□□□□□ -0.14
DHFR-205ENST00000511032 NME9Q86XW9 330 aa14.15□□□□□ -0.14
DHFR-205ENST00000511032 PNNQ9H307 717 aaKnown RBP14.15□□□□□ -0.14
DHFR-205ENST00000511032 SPINK5Q9NQ38 1064 aaPredicted RBP14.15□□□□□ -0.14
DHFR-205ENST00000511032 ESCO1Q5FWF5 840 aa14.14□□□□□ -0.15
DHFR-205ENST00000511032 ADAMTS8Q9UP79 889 aa14.14□□□□□ -0.15
DHFR-205ENST00000511032 TMEM94Q12767 1356 aa14.14□□□□□ -0.15
DHFR-205ENST00000511032 PDE3BQ13370 1112 aa14.13□□□□□ -0.15
DHFR-205ENST00000511032 PSME1Q06323 249 aa14.12□□□□□ -0.15
DHFR-205ENST00000511032 RBM33Q96EV2 1170 aaKnown RBP14.12□□□□□ -0.15
DHFR-205ENST00000511032 CAPN15O75808 1086 aa14.12□□□□□ -0.15
DHFR-205ENST00000511032 NEFMP07197 916 aa14.12□□□□□ -0.15
DHFR-205ENST00000511032 OVOS2A0A0J9YW53 1432 aa14.11□□□□□ -0.15
DHFR-205ENST00000511032 OVOS2Q6IE36 1432 aa14.11□□□□□ -0.15
DHFR-205ENST00000511032 SSH2Q76I76 1423 aa14.11□□□□□ -0.15
DHFR-205ENST00000511032 MAP2P11137 1827 aaKnown RBP14.11□□□□□ -0.15
DHFR-205ENST00000511032 STRCP1A6NGW2 1772 aa14.11□□□□□ -0.15
DHFR-205ENST00000511032 DIAPH1O60610 1272 aaKnown RBP14.11□□□□□ -0.15
DHFR-205ENST00000511032 SHPRHQ149N8 1683 aa14.11□□□□□ -0.15
DHFR-205ENST00000511032 USP31Q70CQ4 1352 aa14.11□□□□□ -0.15
DHFR-205ENST00000511032 CDK12Q9NYV4 1490 aaPredicted RBP14.11□□□□□ -0.15
DHFR-205ENST00000511032 LRRC7Q96NW7 1537 aa14.1□□□□□ -0.15
DHFR-205ENST00000511032 SMG6Q86US8 1419 aaKnown RBP14.1□□□□□ -0.15
DHFR-205ENST00000511032 PPM1GO15355 546 aaPredicted RBP14.1□□□□□ -0.15
DHFR-205ENST00000511032 PAK3O75914 559 aaPredicted RBP14.1□□□□□ -0.15
DHFR-205ENST00000511032 NEFLP07196 543 aa14.1□□□□□ -0.15
DHFR-205ENST00000511032 U2AF1L5P0DN76 240 aaPredicted RBP14.09□□□□□ -0.15
DHFR-205ENST00000511032 U2AF1Q01081 240 aaKnown RBP eCLIP14.09□□□□□ -0.15
DHFR-205ENST00000511032 C1orf167Q5SNV9 1468 aa14.08□□□□□ -0.15
DHFR-205ENST00000511032 PNPLA6Q8IY17 1366 aa14.08□□□□□ -0.15
DHFR-205ENST00000511032 U2SURPO15042 1029 aaKnown RBP14.08□□□□□ -0.16
DHFR-205ENST00000511032 NLRP6P59044 892 aa14.08□□□□□ -0.16
DHFR-205ENST00000511032 ABTB2Q8N961 1025 aa14.08□□□□□ -0.16
DHFR-205ENST00000511032 RUNDC1Q96C34 613 aa14.08□□□□□ -0.16
DHFR-205ENST00000511032 POLKQ9UBT6 870 aa14.08□□□□□ -0.16
DHFR-205ENST00000511032 USP54Q70EL1 1684 aa14.08□□□□□ -0.16
DHFR-205ENST00000511032 PIK3C2AO00443 1686 aa14.07□□□□□ -0.16
DHFR-205ENST00000511032 DSG3P32926 999 aa14.07□□□□□ -0.16
DHFR-205ENST00000511032 MAPK8IP3Q9UPT6 1336 aa14.07□□□□□ -0.16
DHFR-205ENST00000511032 COL3A1P02461 1466 aaPredicted RBP14.06□□□□□ -0.16
DHFR-205ENST00000511032 MST1RQ04912 1400 aa14.06□□□□□ -0.16
DHFR-205ENST00000511032 KIF24Q5T7B8 1368 aa14.06□□□□□ -0.16
DHFR-205ENST00000511032 GTF3C3Q9Y5Q9 886 aa14.06□□□□□ -0.16
DHFR-205ENST00000511032 KCNH5Q8NCM2 988 aa14.05□□□□□ -0.16
DHFR-205ENST00000511032 ZRANB1Q9UGI0 708 aa14.05□□□□□ -0.16
DHFR-205ENST00000511032 SALL2Q9Y467 1007 aaPredicted RBP14.05□□□□□ -0.16
DHFR-205ENST00000511032 NPHP3Q7Z494 1330 aa14.04□□□□□ -0.16
DHFR-205ENST00000511032 ZNF335Q9H4Z2 1342 aaPredicted RBP14.04□□□□□ -0.16
DHFR-205ENST00000511032 CCDC146Q8IYE0 955 aa14.04□□□□□ -0.16
DHFR-205ENST00000511032 ORAI2Q96SN7 254 aa14.04□□□□□ -0.16
DHFR-205ENST00000511032 FOXO3O43524 673 aa14.03□□□□□ -0.16
DHFR-205ENST00000511032 EMILIN1Q9Y6C2 1016 aa14.03□□□□□ -0.16
DHFR-205ENST00000511032 SBNO1A3KN83 1393 aa14.03□□□□□ -0.16
DHFR-205ENST00000511032 XIRP1Q702N8 1843 aaKnown RBP14.02□□□□□ -0.16
DHFR-205ENST00000511032 APAF1O14727 1248 aa14.02□□□□□ -0.16
DHFR-205ENST00000511032 FCHSD2O94868 740 aa14.02□□□□□ -0.16
DHFR-205ENST00000511032 AMPHP49418 695 aa14.02□□□□□ -0.16
DHFR-205ENST00000511032 RRS1Q15050 365 aaKnown RBP14.02□□□□□ -0.16
DHFR-205ENST00000511032 KRT28Q7Z3Y7 464 aa14.02□□□□□ -0.16
DHFR-205ENST00000511032 FLT4P35916 1363 aa14.02□□□□□ -0.17
DHFR-205ENST00000511032 GOLGA2Q08379 1002 aa14.01□□□□□ -0.17
DHFR-205ENST00000511032 SOX12O15370 315 aa14□□□□□ -0.17
DHFR-205ENST00000511032 RTL1A6NKG5 1358 aa14□□□□□ -0.17
DHFR-205ENST00000511032 SOCS7O14512 581 aa13.99□□□□□ -0.17
DHFR-205ENST00000511032 IL13P35225 146 aa13.99□□□□□ -0.17
DHFR-205ENST00000511032 CCDC27Q2M243 656 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms