RNA–Protein interactions for RNA: ENST00000509355.5

PDE4D-217, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 847 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-217ENST00000509355 FBXO31Q5XUX0 539 aaPredicted RBP11.21□□□□□ -0.61
PDE4D-217ENST00000509355 DDRGK1Q96HY6 314 aa11.21□□□□□ -0.61
PDE4D-217ENST00000509355 BAP1Q92560 729 aa11.2□□□□□ -0.62
PDE4D-217ENST00000509355 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.2□□□□□ -0.62
PDE4D-217ENST00000509355 NUTM2BA6NNL0 878 aaPredicted RBP11.18□□□□□ -0.62
PDE4D-217ENST00000509355 NUTM2EB1AL46 878 aaPredicted RBP11.18□□□□□ -0.62
PDE4D-217ENST00000509355 CTC1Q2NKJ3 1217 aa11.18□□□□□ -0.62
PDE4D-217ENST00000509355 NUTM2DQ5VT03 806 aaPredicted RBP11.18□□□□□ -0.62
PDE4D-217ENST00000509355 NUTM2AQ8IVF1 878 aaPredicted RBP11.18□□□□□ -0.62
PDE4D-217ENST00000509355 MAP10Q9P2G4 905 aa11.18□□□□□ -0.62
PDE4D-217ENST00000509355 POTECB2RU33 542 aa11.17□□□□□ -0.62
PDE4D-217ENST00000509355 ZNF511Q8NB15 262 aa11.17□□□□□ -0.62
PDE4D-217ENST00000509355 LINC01559Q495D7 138 aa11.16□□□□□ -0.62
PDE4D-217ENST00000509355 PPP2R2DQ66LE6 453 aa11.16□□□□□ -0.62
PDE4D-217ENST00000509355 PROCA1Q8NCQ7 364 aaPredicted RBP11.16□□□□□ -0.62
PDE4D-217ENST00000509355 DACH1Q9UI36 760 aa11.16□□□□□ -0.62
PDE4D-217ENST00000509355 AXIN1O15169 862 aa11.15□□□□□ -0.62
PDE4D-217ENST00000509355 EHBP1Q8NDI1 1231 aa11.15□□□□□ -0.62
PDE4D-217ENST00000509355 CTHP32929 405 aa11.14□□□□□ -0.63
PDE4D-217ENST00000509355 MPNDQ8N594 471 aa11.14□□□□□ -0.63
PDE4D-217ENST00000509355 HPS1Q92902 700 aa11.14□□□□□ -0.63
PDE4D-217ENST00000509355 ZNF775Q96BV0 537 aaPredicted RBP11.14□□□□□ -0.63
PDE4D-217ENST00000509355 VARSP26640 1264 aaKnown RBP11.12□□□□□ -0.63
PDE4D-217ENST00000509355 CTDSPL2Q05D32 466 aa11.11□□□□□ -0.63
PDE4D-217ENST00000509355 HELBQ8NG08 1087 aaPredicted RBP11.11□□□□□ -0.63
PDE4D-217ENST00000509355 ALDH1A1P00352 501 aa11.1□□□□□ -0.63
PDE4D-217ENST00000509355 GOPCQ9HD26 462 aa11.1□□□□□ -0.63
PDE4D-217ENST00000509355 C4orf48Q5BLP8 95 aa11.09□□□□□ -0.63
PDE4D-217ENST00000509355 TSC1Q92574 1164 aa11.09□□□□□ -0.63
PDE4D-217ENST00000509355 FOXJ1Q92949 421 aa11.09□□□□□ -0.63
PDE4D-217ENST00000509355 BRPF1P55201 1214 aaPredicted RBP11.07□□□□□ -0.64
PDE4D-217ENST00000509355 SH3RF1Q7Z6J0 888 aa11.07□□□□□ -0.64
PDE4D-217ENST00000509355 CDK15Q96Q40 435 aa11.06□□□□□ -0.64
PDE4D-217ENST00000509355 TLL2Q9Y6L7 1015 aa11.06□□□□□ -0.64
PDE4D-217ENST00000509355 C11orf95C9JLR9 678 aaPredicted RBP11.05□□□□□ -0.64
PDE4D-217ENST00000509355 NEUROD2Q15784 382 aa11.05□□□□□ -0.64
PDE4D-217ENST00000509355 ARMC2Q8NEN0 867 aa11.05□□□□□ -0.64
PDE4D-217ENST00000509355 LRRN4Q8WUT4 740 aa11.05□□□□□ -0.64
PDE4D-217ENST00000509355 GMPR2Q9P2T1 348 aaKnown RBP11.05□□□□□ -0.64
PDE4D-217ENST00000509355 SH3BP5LQ7L8J4 393 aa11.04□□□□□ -0.64
PDE4D-217ENST00000509355 C1QTNF2Q9BXJ5 285 aa11.04□□□□□ -0.64
PDE4D-217ENST00000509355 TPRNQ4KMQ1 711 aa11.03□□□□□ -0.64
PDE4D-217ENST00000509355 FAM174AQ8TBP5 190 aa11.03□□□□□ -0.64
PDE4D-217ENST00000509355 ATP13A2Q9NQ11 1180 aa11.03□□□□□ -0.64
PDE4D-217ENST00000509355 BPHLQ86WA6 291 aaPredicted RBP11.02□□□□□ -0.65
PDE4D-217ENST00000509355 WASF2Q9Y6W5 498 aa11.02□□□□□ -0.65
PDE4D-217ENST00000509355 GPKOWQ92917 476 aaPredicted RBP eCLIP11.01□□□□□ -0.65
PDE4D-217ENST00000509355 KLF16Q9BXK1 252 aaPredicted RBP11.01□□□□□ -0.65
PDE4D-217ENST00000509355 IL27Q8NEV9 243 aa11□□□□□ -0.65
PDE4D-217ENST00000509355 RFC5P40937 340 aa10.99□□□□□ -0.65
PDE4D-217ENST00000509355 GRM5P41594 1212 aa10.99□□□□□ -0.65
PDE4D-217ENST00000509355 NBPF14Q5TI25 921 aa10.99□□□□□ -0.65
PDE4D-217ENST00000509355 ADH1CP00326 375 aa10.98□□□□□ -0.65
PDE4D-217ENST00000509355 TRMT44Q8IYL2 757 aaKnown RBP10.98□□□□□ -0.65
PDE4D-217ENST00000509355 AP1G2O75843 785 aa10.97□□□□□ -0.65
PDE4D-217ENST00000509355 NNTQ13423 1086 aa10.97□□□□□ -0.65
PDE4D-217ENST00000509355 NR6A1Q15406 480 aa10.97□□□□□ -0.65
PDE4D-217ENST00000509355 PDXDC2PQ6P474 469 aa10.97□□□□□ -0.65
PDE4D-217ENST00000509355 TRIM47Q96LD4 638 aa10.96□□□□□ -0.65
PDE4D-217ENST00000509355 FKBPLQ9UIM3 349 aa10.96□□□□□ -0.65
PDE4D-217ENST00000509355 CAPN5O15484 640 aaPredicted RBP10.95□□□□□ -0.66
PDE4D-217ENST00000509355 USP17L8P0C7I0 530 aa10.95□□□□□ -0.66
PDE4D-217ENST00000509355 TIMP2P16035 220 aa10.95□□□□□ -0.66
PDE4D-217ENST00000509355 AGERQ15109 404 aa10.95□□□□□ -0.66
PDE4D-217ENST00000509355 TRIM46Q7Z4K8 759 aa10.95□□□□□ -0.66
PDE4D-217ENST00000509355 EPS8L1Q8TE68 723 aa10.95□□□□□ -0.66
PDE4D-217ENST00000509355 PCMTD1Q96MG8 357 aaPredicted RBP10.95□□□□□ -0.66
PDE4D-217ENST00000509355 OCSTAMPQ9BR26 566 aa10.95□□□□□ -0.66
PDE4D-217ENST00000509355 HMX1Q9NP08 348 aaPredicted RBP10.95□□□□□ -0.66
PDE4D-217ENST00000509355 MAP4K5Q9Y4K4 846 aa10.95□□□□□ -0.66
PDE4D-217ENST00000509355 ZC3H4Q9UPT8 1303 aaKnown RBP10.94□□□□□ -0.66
PDE4D-217ENST00000509355 NR5A1Q13285 461 aa10.94□□□□□ -0.66
PDE4D-217ENST00000509355 LCE2AQ5TA79 106 aaPredicted RBP10.94□□□□□ -0.66
PDE4D-217ENST00000509355 SENP2Q9HC62 589 aa10.94□□□□□ -0.66
PDE4D-217ENST00000509355 ATP1B4Q9UN42 357 aaPredicted RBP10.94□□□□□ -0.66
PDE4D-217ENST00000509355 NR3C2P08235 984 aa10.93□□□□□ -0.66
PDE4D-217ENST00000509355 SNRPBP14678 240 aaKnown RBP10.93□□□□□ -0.66
PDE4D-217ENST00000509355 ERFEQ4G0M1 354 aa10.93□□□□□ -0.66
PDE4D-217ENST00000509355 TMEM259Q4ZIN3 620 aa10.91□□□□□ -0.66
PDE4D-217ENST00000509355 TREML4Q6UXN2 200 aa10.91□□□□□ -0.66
PDE4D-217ENST00000509355 TRIM34Q9BYJ4 488 aa10.91□□□□□ -0.66
PDE4D-217ENST00000509355 BMP1P13497 986 aa10.9□□□□□ -0.66
PDE4D-217ENST00000509355 ARID5BQ14865 1188 aa10.9□□□□□ -0.66
PDE4D-217ENST00000509355 GPSM3Q9Y4H4 160 aa10.9□□□□□ -0.66
PDE4D-217ENST00000509355 WDR4P57081 412 aaKnown RBP10.89□□□□□ -0.67
PDE4D-217ENST00000509355 KIFC2Q96AC6 838 aa10.89□□□□□ -0.67
PDE4D-217ENST00000509355 MAGEB6P1A0A0J9YX57 407 aa10.88□□□□□ -0.67
PDE4D-217ENST00000509355 ITPKCQ96DU7 683 aa10.88□□□□□ -0.67
PDE4D-217ENST00000509355 GJD4Q96KN9 370 aaPredicted RBP10.87□□□□□ -0.67
PDE4D-217ENST00000509355 ARHGAP9Q9BRR9 750 aa10.87□□□□□ -0.67
PDE4D-217ENST00000509355 WFS1O76024 890 aa10.86□□□□□ -0.67
PDE4D-217ENST00000509355 CARD14Q9BXL6 1004 aa10.86□□□□□ -0.67
PDE4D-217ENST00000509355 ZFAND3Q9H8U3 227 aa10.86□□□□□ -0.67
PDE4D-217ENST00000509355 VASH1Q7L8A9 365 aaPredicted RBP10.85□□□□□ -0.67
PDE4D-217ENST00000509355 ZFP42Q96MM3 310 aa10.85□□□□□ -0.67
PDE4D-217ENST00000509355 ZIC2O95409 532 aaPredicted RBP10.84□□□□□ -0.67
PDE4D-217ENST00000509355 PTK2Q05397 1052 aa10.84□□□□□ -0.67
PDE4D-217ENST00000509355 NFX1Q12986 1120 aaKnown RBP10.84□□□□□ -0.67
PDE4D-217ENST00000509355 MRPL14Q6P1L8 145 aaKnown RBP10.84□□□□□ -0.67
PDE4D-217ENST00000509355 FSHRP23945 695 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms