RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 HMOX1P09601 288 aa19.47■□□□□ 0.71
PHF3-209ENST00000509330 TECPR2O15040 1411 aa19.46■□□□□ 0.71
PHF3-209ENST00000509330 ATP7BP35670 1465 aa19.45■□□□□ 0.7
PHF3-209ENST00000509330 BCL2L13Q9BXK5 485 aa19.45■□□□□ 0.7
PHF3-209ENST00000509330 ACEP12821 1306 aa19.44■□□□□ 0.7
PHF3-209ENST00000509330 KCNA6P17658 529 aa19.44■□□□□ 0.7
PHF3-209ENST00000509330 MAPK8IP3Q9UPT6 1336 aa19.44■□□□□ 0.7
PHF3-209ENST00000509330 COG3Q96JB2 828 aa19.44■□□□□ 0.7
PHF3-209ENST00000509330 CPS1P31327 1500 aa19.44■□□□□ 0.7
PHF3-209ENST00000509330 SKAP1Q86WV1 359 aa19.44■□□□□ 0.7
PHF3-209ENST00000509330 RIMS1Q86UR5 1692 aaKnown RBP19.43■□□□□ 0.7
PHF3-209ENST00000509330 TRMT2AQ8IZ69 625 aaKnown RBP19.43■□□□□ 0.7
PHF3-209ENST00000509330 CPSF1Q10570 1443 aaKnown RBP19.43■□□□□ 0.7
PHF3-209ENST00000509330 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.42■□□□□ 0.7
PHF3-209ENST00000509330 NKTRP30414 1462 aaKnown RBP19.42■□□□□ 0.7
PHF3-209ENST00000509330 SIRT1Q96EB6 747 aa19.42■□□□□ 0.7
PHF3-209ENST00000509330 TSR2Q969E8 191 aaKnown RBP19.41■□□□□ 0.7
PHF3-209ENST00000509330 TBX22Q9Y458 520 aa19.41■□□□□ 0.7
PHF3-209ENST00000509330 EDC4Q6P2E9 1401 aaKnown RBP19.41■□□□□ 0.7
PHF3-209ENST00000509330 FRAT1Q92837 279 aaPredicted RBP19.41■□□□□ 0.7
PHF3-209ENST00000509330 IQSEC2Q5JU85 1478 aa19.4■□□□□ 0.7
PHF3-209ENST00000509330 COL3A1P02461 1466 aaPredicted RBP19.39■□□□□ 0.7
PHF3-209ENST00000509330 KIF20BQ96Q89 1820 aa19.39■□□□□ 0.7
PHF3-209ENST00000509330 CANXP27824 592 aaKnown RBP19.39■□□□□ 0.7
PHF3-209ENST00000509330 PRKAR2BP31323 418 aa19.39■□□□□ 0.7
PHF3-209ENST00000509330 PLEKHF1Q96S99 279 aa19.39■□□□□ 0.7
PHF3-209ENST00000509330 ARHGAP23Q9P227 1491 aa19.39■□□□□ 0.69
PHF3-209ENST00000509330 SLIT1O75093 1534 aa19.39■□□□□ 0.69
PHF3-209ENST00000509330 KNDC1Q76NI1 1749 aa19.39■□□□□ 0.69
PHF3-209ENST00000509330 TMPOP42166 694 aaKnown RBP19.38■□□□□ 0.69
PHF3-209ENST00000509330 MED14O60244 1454 aa19.38■□□□□ 0.69
PHF3-209ENST00000509330 RIPK4P57078 832 aa19.38■□□□□ 0.69
PHF3-209ENST00000509330 NUTM2GQ5VZR2 741 aa19.38■□□□□ 0.69
PHF3-209ENST00000509330 NGDNQ8NEJ9 315 aaKnown RBP19.38■□□□□ 0.69
PHF3-209ENST00000509330 PLEKHG5O94827 1062 aa19.38■□□□□ 0.69
PHF3-209ENST00000509330 TTC21BQ7Z4L5 1316 aa19.37■□□□□ 0.69
PHF3-209ENST00000509330 CDC42BPGQ6DT37 1551 aa19.37■□□□□ 0.69
PHF3-209ENST00000509330 DNAJC5Q9H3Z4 198 aa19.36■□□□□ 0.69
PHF3-209ENST00000509330 ANKRD26Q9UPS8 1709 aa19.35■□□□□ 0.69
PHF3-209ENST00000509330 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.35■□□□□ 0.69
PHF3-209ENST00000509330 ZNF692Q9BU19 519 aaPredicted RBP19.35■□□□□ 0.69
PHF3-209ENST00000509330 LAS1LQ9Y4W2 734 aaKnown RBP19.35■□□□□ 0.69
PHF3-209ENST00000509330 CEP170BQ9Y4F5 1589 aaPredicted RBP19.35■□□□□ 0.69
PHF3-209ENST00000509330 ANKLE2Q86XL3 938 aa19.35■□□□□ 0.69
PHF3-209ENST00000509330 PHACTR3Q96KR7 559 aa19.35■□□□□ 0.69
PHF3-209ENST00000509330 THUMPD2Q9BTF0 503 aaKnown RBP19.35■□□□□ 0.69
PHF3-209ENST00000509330 TRIM35Q9UPQ4 493 aa19.35■□□□□ 0.69
PHF3-209ENST00000509330 TNNQ9UQP3 1299 aa19.34■□□□□ 0.69
PHF3-209ENST00000509330 NGEFQ8N5V2 710 aa19.34■□□□□ 0.69
PHF3-209ENST00000509330 PHF23Q9BUL5 403 aaPredicted RBP19.34■□□□□ 0.69
PHF3-209ENST00000509330 PANK1Q8TE04 598 aa19.33■□□□□ 0.69
PHF3-209ENST00000509330 PNPLA6Q8IY17 1366 aa19.33■□□□□ 0.68
PHF3-209ENST00000509330 WDR63Q8IWG1 891 aa19.33■□□□□ 0.68
PHF3-209ENST00000509330 C14orf37Q86TY3 774 aa19.32■□□□□ 0.68
PHF3-209ENST00000509330 CLUAP1Q96AJ1 413 aa19.32■□□□□ 0.68
PHF3-209ENST00000509330 MAP2P11137 1827 aaKnown RBP19.32■□□□□ 0.68
PHF3-209ENST00000509330 RSPH6AQ9H0K4 717 aa19.32■□□□□ 0.68
PHF3-209ENST00000509330 PAK3O75914 559 aaPredicted RBP19.31■□□□□ 0.68
PHF3-209ENST00000509330 NEFMP07197 916 aa19.31■□□□□ 0.68
PHF3-209ENST00000509330 COG6Q9Y2V7 657 aa19.31■□□□□ 0.68
PHF3-209ENST00000509330 PLEKHG3A1L390 1219 aa19.3■□□□□ 0.68
PHF3-209ENST00000509330 IL13P35225 146 aa19.3■□□□□ 0.68
PHF3-209ENST00000509330 MYH16Q9H6N6 1097 aa19.3■□□□□ 0.68
PHF3-209ENST00000509330 FANCIQ9NVI1 1328 aa19.3■□□□□ 0.68
PHF3-209ENST00000509330 RARSP54136 660 aaKnown RBP19.29■□□□□ 0.68
PHF3-209ENST00000509330 EXOSC9Q06265 439 aaKnown RBP19.29■□□□□ 0.68
PHF3-209ENST00000509330 CCDC27Q2M243 656 aa19.29■□□□□ 0.68
PHF3-209ENST00000509330 AEBP1Q8IUX7 1158 aa19.29■□□□□ 0.68
PHF3-209ENST00000509330 USP6P35125 1406 aa19.29■□□□□ 0.68
PHF3-209ENST00000509330 HSP90AB2PQ58FF8 381 aa19.29■□□□□ 0.68
PHF3-209ENST00000509330 ITSN1Q15811 1721 aa19.29■□□□□ 0.68
PHF3-209ENST00000509330 LRRC7Q96NW7 1537 aa19.28■□□□□ 0.68
PHF3-209ENST00000509330 FCHSD2O94868 740 aa19.28■□□□□ 0.68
PHF3-209ENST00000509330 MON2Q7Z3U7 1717 aa19.27■□□□□ 0.68
PHF3-209ENST00000509330 PTCH1Q13635 1447 aa19.27■□□□□ 0.68
PHF3-209ENST00000509330 DIP2AQ14689 1571 aa19.26■□□□□ 0.67
PHF3-209ENST00000509330 FAM83GA6ND36 823 aa19.26■□□□□ 0.67
PHF3-209ENST00000509330 DCTN1Q14203 1278 aa19.26■□□□□ 0.67
PHF3-209ENST00000509330 ADGRB2O60241 1585 aa19.26■□□□□ 0.67
PHF3-209ENST00000509330 RGPD8O14715 1765 aaPredicted RBP19.25■□□□□ 0.67
PHF3-209ENST00000509330 EIF4A2Q14240 407 aaKnown RBP19.25■□□□□ 0.67
PHF3-209ENST00000509330 NLRP6P59044 892 aa19.25■□□□□ 0.67
PHF3-209ENST00000509330 SULT6B1Q6IMI4 303 aa19.25■□□□□ 0.67
PHF3-209ENST00000509330 AKAP12Q02952 1782 aa19.24■□□□□ 0.67
PHF3-209ENST00000509330 ELL2O00472 640 aaPredicted RBP19.24■□□□□ 0.67
PHF3-209ENST00000509330 RLBP1P12271 317 aa19.24■□□□□ 0.67
PHF3-209ENST00000509330 PNNQ9H307 717 aaKnown RBP19.24■□□□□ 0.67
PHF3-209ENST00000509330 AATKQ6ZMQ8 1374 aa19.23■□□□□ 0.67
PHF3-209ENST00000509330 ZBTB7CA1YPR0 619 aa19.23■□□□□ 0.67
PHF3-209ENST00000509330 XPCQ01831 940 aaPredicted RBP19.23■□□□□ 0.67
PHF3-209ENST00000509330 TCERG1O14776 1098 aaKnown RBP19.22■□□□□ 0.67
PHF3-209ENST00000509330 SMC4Q9NTJ3 1288 aa19.22■□□□□ 0.67
PHF3-209ENST00000509330 CDK12Q9NYV4 1490 aaPredicted RBP19.22■□□□□ 0.67
PHF3-209ENST00000509330 MAP3K19Q56UN5 1328 aa19.21■□□□□ 0.67
PHF3-209ENST00000509330 NFE2L2Q16236 605 aa19.21■□□□□ 0.67
PHF3-209ENST00000509330 ESCO1Q5FWF5 840 aa19.21■□□□□ 0.67
PHF3-209ENST00000509330 OVOS2A0A0J9YW53 1432 aa19.21■□□□□ 0.67
PHF3-209ENST00000509330 OVOS2Q6IE36 1432 aa19.21■□□□□ 0.67
PHF3-209ENST00000509330 ABTB2Q8N961 1025 aa19.2■□□□□ 0.66
PHF3-209ENST00000509330 LTV1Q96GA3 475 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms