RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 DESI1Q6ICB0 168 aa8.15□□□□□ -1.1
SMARCA5-202ENST00000508573 NXF1Q9UBU9 619 aaKnown RBP8.15□□□□□ -1.1
SMARCA5-202ENST00000508573 STK17AQ9UEE5 414 aa8.15□□□□□ -1.1
SMARCA5-202ENST00000508573 TLL2Q9Y6L7 1015 aa8.15□□□□□ -1.1
SMARCA5-202ENST00000508573 RSBN1LQ6PCB5 846 aaPredicted RBP8.14□□□□□ -1.11
SMARCA5-202ENST00000508573 LYPD8Q6UX82 237 aa8.14□□□□□ -1.11
SMARCA5-202ENST00000508573 BCANQ96GW7 911 aa8.14□□□□□ -1.11
SMARCA5-202ENST00000508573 TRIM66O15016 1216 aa8.13□□□□□ -1.11
SMARCA5-202ENST00000508573 CSPP1Q1MSJ5 1256 aa8.13□□□□□ -1.11
SMARCA5-202ENST00000508573 ARXQ96QS3 562 aa8.13□□□□□ -1.11
SMARCA5-202ENST00000508573 CFAP99D6REC4 459 aa8.12□□□□□ -1.11
SMARCA5-202ENST00000508573 HRCP23327 699 aa8.12□□□□□ -1.11
SMARCA5-202ENST00000508573 GJA5P36382 358 aa8.12□□□□□ -1.11
SMARCA5-202ENST00000508573 VEGFBP49765 207 aa8.12□□□□□ -1.11
SMARCA5-202ENST00000508573 NNTQ13423 1086 aa8.12□□□□□ -1.11
SMARCA5-202ENST00000508573 ARID5BQ14865 1188 aa8.12□□□□□ -1.11
SMARCA5-202ENST00000508573 RIC3Q7Z5B4 369 aa8.12□□□□□ -1.11
SMARCA5-202ENST00000508573 PARP9Q8IXQ6 854 aa8.12□□□□□ -1.11
SMARCA5-202ENST00000508573 ZFP42Q96MM3 310 aa8.12□□□□□ -1.11
SMARCA5-202ENST00000508573 SPTLC1O15269 473 aa8.11□□□□□ -1.11
SMARCA5-202ENST00000508573 MPNDQ8N594 471 aa8.11□□□□□ -1.11
SMARCA5-202ENST00000508573 FAM174AQ8TBP5 190 aa8.11□□□□□ -1.11
SMARCA5-202ENST00000508573 AK7Q96M32 723 aa8.11□□□□□ -1.11
SMARCA5-202ENST00000508573 ZBTB3Q9H5J0 574 aa8.11□□□□□ -1.11
SMARCA5-202ENST00000508573 TIMELESSQ9UNS1 1208 aa8.11□□□□□ -1.11
SMARCA5-202ENST00000508573 WDR4P57081 412 aaKnown RBP8.1□□□□□ -1.11
SMARCA5-202ENST00000508573 AGERQ15109 404 aa8.1□□□□□ -1.11
SMARCA5-202ENST00000508573 CABLES1Q8TDN4 633 aa8.1□□□□□ -1.11
SMARCA5-202ENST00000508573 TSC1Q92574 1164 aa8.1□□□□□ -1.11
SMARCA5-202ENST00000508573 FOXJ1Q92949 421 aa8.1□□□□□ -1.11
SMARCA5-202ENST00000508573 SCARF1Q14162 830 aa8.09□□□□□ -1.11
SMARCA5-202ENST00000508573 MAP10Q9P2G4 905 aa8.09□□□□□ -1.11
SMARCA5-202ENST00000508573 NUTM2BA6NNL0 878 aaPredicted RBP8.08□□□□□ -1.12
SMARCA5-202ENST00000508573 NUTM2EB1AL46 878 aaPredicted RBP8.08□□□□□ -1.12
SMARCA5-202ENST00000508573 GMPRP36959 345 aa8.08□□□□□ -1.12
SMARCA5-202ENST00000508573 NUTM2DQ5VT03 806 aaPredicted RBP8.08□□□□□ -1.12
SMARCA5-202ENST00000508573 MRPL14Q6P1L8 145 aaKnown RBP8.08□□□□□ -1.12
SMARCA5-202ENST00000508573 NUTM2AQ8IVF1 878 aaPredicted RBP8.08□□□□□ -1.12
SMARCA5-202ENST00000508573 PURBQ96QR8 312 aaKnown RBP8.08□□□□□ -1.12
SMARCA5-202ENST00000508573 TIMP2P16035 220 aa8.07□□□□□ -1.12
SMARCA5-202ENST00000508573 PRPF38BQ5VTL8 546 aaKnown RBP8.07□□□□□ -1.12
SMARCA5-202ENST00000508573 IRF7Q92985 503 aa8.07□□□□□ -1.12
SMARCA5-202ENST00000508573 PER1O15534 1290 aaPredicted RBP8.06□□□□□ -1.12
SMARCA5-202ENST00000508573 ADH1CP00326 375 aa8.06□□□□□ -1.12
SMARCA5-202ENST00000508573 NPAS3Q8IXF0 933 aa8.06□□□□□ -1.12
SMARCA5-202ENST00000508573 SOBPA7XYQ1 873 aa8.05□□□□□ -1.12
SMARCA5-202ENST00000508573 F12P00748 615 aaPredicted RBP8.05□□□□□ -1.12
SMARCA5-202ENST00000508573 TPRNQ4KMQ1 711 aa8.05□□□□□ -1.12
SMARCA5-202ENST00000508573 CDK15Q96Q40 435 aa8.05□□□□□ -1.12
SMARCA5-202ENST00000508573 H3BM21 787 aa8.04□□□□□ -1.12
SMARCA5-202ENST00000508573 ZIC2O95409 532 aaPredicted RBP8.04□□□□□ -1.12
SMARCA5-202ENST00000508573 KLF16Q9BXK1 252 aaPredicted RBP8.04□□□□□ -1.12
SMARCA5-202ENST00000508573 ZFAND3Q9H8U3 227 aa8.04□□□□□ -1.12
SMARCA5-202ENST00000508573 LIMD1Q9UGP4 676 aa8.04□□□□□ -1.12
SMARCA5-202ENST00000508573 PDE4DQ08499 809 aa8.03□□□□□ -1.12
SMARCA5-202ENST00000508573 QPCTQ16769 361 aa8.03□□□□□ -1.12
SMARCA5-202ENST00000508573 C4orf48Q5BLP8 95 aa8.03□□□□□ -1.12
SMARCA5-202ENST00000508573 MYSM1Q5VVJ2 828 aa8.03□□□□□ -1.12
SMARCA5-202ENST00000508573 BPHLQ86WA6 291 aaPredicted RBP8.03□□□□□ -1.12
SMARCA5-202ENST00000508573 ERBB4Q15303 1308 aa8.03□□□□□ -1.12
SMARCA5-202ENST00000508573 FAM181BA6NEQ2 426 aa8.02□□□□□ -1.13
SMARCA5-202ENST00000508573 GRM5P41594 1212 aa8.02□□□□□ -1.13
SMARCA5-202ENST00000508573 NR5A1Q13285 461 aa8.02□□□□□ -1.13
SMARCA5-202ENST00000508573 C6orf118Q5T5N4 469 aa8.02□□□□□ -1.13
SMARCA5-202ENST00000508573 ZSCAN1Q8NBB4 408 aa8.02□□□□□ -1.13
SMARCA5-202ENST00000508573 ITPKCQ96DU7 683 aa8.02□□□□□ -1.13
SMARCA5-202ENST00000508573 ARMC2Q8NEN0 867 aa8.01□□□□□ -1.13
SMARCA5-202ENST00000508573 LILRB3O75022 631 aa8□□□□□ -1.13
SMARCA5-202ENST00000508573 NR3C2P08235 984 aa8□□□□□ -1.13
SMARCA5-202ENST00000508573 RTL5Q5HYW3 569 aaPredicted RBP8□□□□□ -1.13
SMARCA5-202ENST00000508573 SLC24A3Q9HC58 644 aa8□□□□□ -1.13
SMARCA5-202ENST00000508573 MAN1A2O60476 641 aa7.99□□□□□ -1.13
SMARCA5-202ENST00000508573 BMP2P12643 396 aa7.99□□□□□ -1.13
SMARCA5-202ENST00000508573 POLR3EQ9NVU0 708 aa7.99□□□□□ -1.13
SMARCA5-202ENST00000508573 UPP2O95045 317 aa7.98□□□□□ -1.13
SMARCA5-202ENST00000508573 LORP23490 312 aaPredicted RBP7.98□□□□□ -1.13
SMARCA5-202ENST00000508573 TUSC1Q2TAM9 212 aa7.98□□□□□ -1.13
SMARCA5-202ENST00000508573 MAGEB6P1A0A0J9YX57 407 aa7.97□□□□□ -1.13
SMARCA5-202ENST00000508573 VASH1Q7L8A9 365 aaPredicted RBP7.97□□□□□ -1.13
SMARCA5-202ENST00000508573 HELBQ8NG08 1087 aaPredicted RBP7.97□□□□□ -1.13
SMARCA5-202ENST00000508573 CLK2P49760 499 aaKnown RBP7.95□□□□□ -1.14
SMARCA5-202ENST00000508573 NBPF14Q5TI25 921 aa7.95□□□□□ -1.14
SMARCA5-202ENST00000508573 SH3RF1Q7Z6J0 888 aa7.95□□□□□ -1.14
SMARCA5-202ENST00000508573 CARD14Q9BXL6 1004 aa7.95□□□□□ -1.14
SMARCA5-202ENST00000508573 RSPH6AQ9H0K4 717 aa7.95□□□□□ -1.14
SMARCA5-202ENST00000508573 FSHRP23945 695 aa7.94□□□□□ -1.14
SMARCA5-202ENST00000508573 CTDSPL2Q05D32 466 aa7.94□□□□□ -1.14
SMARCA5-202ENST00000508573 LINC00528Q8N1L1 170 aa7.94□□□□□ -1.14
SMARCA5-202ENST00000508573 SH3BP5LQ7L8J4 393 aa7.93□□□□□ -1.14
SMARCA5-202ENST00000508573 C1QTNF2Q9BXJ5 285 aa7.93□□□□□ -1.14
SMARCA5-202ENST00000508573 ATP1B4Q9UN42 357 aaPredicted RBP7.93□□□□□ -1.14
SMARCA5-202ENST00000508573 PPFIA3O75145 1194 aa7.92□□□□□ -1.14
SMARCA5-202ENST00000508573 EMILIN1Q9Y6C2 1016 aa7.92□□□□□ -1.14
SMARCA5-202ENST00000508573 TRMT44Q8IYL2 757 aaKnown RBP7.91□□□□□ -1.14
SMARCA5-202ENST00000508573 CCDC116Q8IYX3 515 aa7.91□□□□□ -1.14
SMARCA5-202ENST00000508573 MEIOBQ8N635 442 aa7.91□□□□□ -1.14
SMARCA5-202ENST00000508573 TSEN34Q9BSV6 310 aaKnown RBP7.91□□□□□ -1.14
SMARCA5-202ENST00000508573 MAP4K5Q9Y4K4 846 aa7.91□□□□□ -1.14
SMARCA5-202ENST00000508573 SOS2Q07890 1332 aaPredicted RBP7.9□□□□□ -1.14
SMARCA5-202ENST00000508573 FIGNL2A6NMB9 653 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms