RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 PLXNC1O60486 1568 aa16.08■□□□□ 0.16
SMG7-214ENST00000508461 SULT6B1Q6IMI4 303 aa16.08■□□□□ 0.16
SMG7-214ENST00000508461 NCKAP5LQ9HCH0 1330 aa16.07■□□□□ 0.16
SMG7-214ENST00000508461 FAM83GA6ND36 823 aa16.07■□□□□ 0.16
SMG7-214ENST00000508461 NOL8Q76FK4 1167 aaKnown RBP16.07■□□□□ 0.16
SMG7-214ENST00000508461 CLTCL1P53675 1640 aa16.07■□□□□ 0.16
SMG7-214ENST00000508461 AAMPQ13685 434 aa16.07■□□□□ 0.16
SMG7-214ENST00000508461 TRIM44Q96DX7 344 aaPredicted RBP16.07■□□□□ 0.16
SMG7-214ENST00000508461 TRMT2AQ8IZ69 625 aaKnown RBP16.07■□□□□ 0.16
SMG7-214ENST00000508461 ZFYVE16Q7Z3T8 1539 aa16.06■□□□□ 0.16
SMG7-214ENST00000508461 GOLGA6L3A6NEY3 463 aa16.06■□□□□ 0.16
SMG7-214ENST00000508461 TBC1D2Q9BYX2 928 aa16.06■□□□□ 0.16
SMG7-214ENST00000508461 FCHSD2O94868 740 aa16.06■□□□□ 0.16
SMG7-214ENST00000508461 FOXD4L5Q5VV16 416 aaPredicted RBP16.06■□□□□ 0.16
SMG7-214ENST00000508461 FOXD4L4Q8WXT5 416 aaPredicted RBP16.06■□□□□ 0.16
SMG7-214ENST00000508461 L1TD1Q5T7N2 865 aaKnown RBP16.05■□□□□ 0.16
SMG7-214ENST00000508461 SLC26A8Q96RN1 970 aa16.05■□□□□ 0.16
SMG7-214ENST00000508461 INSRP06213 1382 aa16.05■□□□□ 0.16
SMG7-214ENST00000508461 KDM5AP29375 1690 aaKnown RBP16.04■□□□□ 0.16
SMG7-214ENST00000508461 MIS18AQ9NYP9 233 aa16.04■□□□□ 0.16
SMG7-214ENST00000508461 NUDT16Q96DE0 195 aaKnown RBP16.03■□□□□ 0.16
SMG7-214ENST00000508461 E9PCH4 1651 aa16.03■□□□□ 0.16
SMG7-214ENST00000508461 NFE2L2Q16236 605 aa16.03■□□□□ 0.16
SMG7-214ENST00000508461 PHACTR3Q96KR7 559 aa16.03■□□□□ 0.16
SMG7-214ENST00000508461 CHMP5Q9NZZ3 219 aa16.03■□□□□ 0.16
SMG7-214ENST00000508461 SYNMO15061 1565 aa16.03■□□□□ 0.16
SMG7-214ENST00000508461 CHD1LQ86WJ1 897 aa16.03■□□□□ 0.16
SMG7-214ENST00000508461 API5Q9BZZ5 524 aaKnown RBP16.02■□□□□ 0.16
SMG7-214ENST00000508461 STK31Q9BXU1 1019 aa16.02■□□□□ 0.16
SMG7-214ENST00000508461 CT47B1P0C2W7 299 aaPredicted RBP16.02■□□□□ 0.15
SMG7-214ENST00000508461 MCM10Q7L590 875 aa16.02■□□□□ 0.15
SMG7-214ENST00000508461 TSPYL6Q8N831 410 aa16.02■□□□□ 0.15
SMG7-214ENST00000508461 MADDQ8WXG6 1647 aa16.01■□□□□ 0.15
SMG7-214ENST00000508461 GBP4Q96PP9 640 aa16.01■□□□□ 0.15
SMG7-214ENST00000508461 TRIM6-TRIM34B2RNG4 842 aa16.01■□□□□ 0.15
SMG7-214ENST00000508461 TRIM35Q9UPQ4 493 aa16.01■□□□□ 0.15
SMG7-214ENST00000508461 HAP1P54257 671 aaPredicted RBP16.01■□□□□ 0.15
SMG7-214ENST00000508461 NAP1L5Q96NT1 182 aaPredicted RBP16.01■□□□□ 0.15
SMG7-214ENST00000508461 CCDC27Q2M243 656 aa16■□□□□ 0.15
SMG7-214ENST00000508461 POLKQ9UBT6 870 aa16■□□□□ 0.15
SMG7-214ENST00000508461 TBC1D32Q96NH3 1257 aa16■□□□□ 0.15
SMG7-214ENST00000508461 UHRF1BP1LA0JNW5 1464 aa16■□□□□ 0.15
SMG7-214ENST00000508461 EID1Q9Y6B2 187 aa15.99■□□□□ 0.15
SMG7-214ENST00000508461 CCDC61Q9Y6R9 512 aa15.99■□□□□ 0.15
SMG7-214ENST00000508461 OS9Q13438 667 aaPredicted RBP15.99■□□□□ 0.15
SMG7-214ENST00000508461 TSPYL4Q9UJ04 414 aa15.99■□□□□ 0.15
SMG7-214ENST00000508461 NSD2O96028 1365 aa15.98■□□□□ 0.15
SMG7-214ENST00000508461 FOXD4L6Q3SYB3 417 aaPredicted RBP15.98■□□□□ 0.15
SMG7-214ENST00000508461 FOXD4L3Q6VB84 417 aaPredicted RBP15.98■□□□□ 0.15
SMG7-214ENST00000508461 ANO8Q9HCE9 1232 aaPredicted RBP15.98■□□□□ 0.15
SMG7-214ENST00000508461 MBIPQ9NS73 344 aa15.97■□□□□ 0.15
SMG7-214ENST00000508461 KRT24Q2M2I5 525 aa15.97■□□□□ 0.15
SMG7-214ENST00000508461 RILPL2Q969X0 211 aa15.97■□□□□ 0.15
SMG7-214ENST00000508461 WASLO00401 505 aaPredicted RBP15.97■□□□□ 0.15
SMG7-214ENST00000508461 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.97■□□□□ 0.15
SMG7-214ENST00000508461 SPHKAPQ2M3C7 1700 aa15.96■□□□□ 0.15
SMG7-214ENST00000508461 FKBP5Q13451 457 aaPredicted RBP15.96■□□□□ 0.15
SMG7-214ENST00000508461 TRAK2O60296 914 aa15.96■□□□□ 0.15
SMG7-214ENST00000508461 SLC4A2P04920 1241 aa15.96■□□□□ 0.15
SMG7-214ENST00000508461 AEBP1Q8IUX7 1158 aa15.96■□□□□ 0.15
SMG7-214ENST00000508461 EIF2S2P20042 333 aaKnown RBP15.96■□□□□ 0.15
SMG7-214ENST00000508461 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
SMG7-214ENST00000508461 HMMRO75330 724 aa15.95■□□□□ 0.14
SMG7-214ENST00000508461 POGZQ7Z3K3 1410 aa15.95■□□□□ 0.14
SMG7-214ENST00000508461 TET3O43151 1660 aa15.95■□□□□ 0.14
SMG7-214ENST00000508461 SBNO2Q9Y2G9 1366 aa15.95■□□□□ 0.14
SMG7-214ENST00000508461 SMARCA5O60264 1052 aaPredicted RBP15.94■□□□□ 0.14
SMG7-214ENST00000508461 C8orf58Q8NAV2 365 aa15.94■□□□□ 0.14
SMG7-214ENST00000508461 NLRP6P59044 892 aa15.94■□□□□ 0.14
SMG7-214ENST00000508461 MCM4P33991 863 aa15.94■□□□□ 0.14
SMG7-214ENST00000508461 CEBPAP49715 358 aaPredicted RBP15.94■□□□□ 0.14
SMG7-214ENST00000508461 ZNF428Q96B54 188 aa15.94■□□□□ 0.14
SMG7-214ENST00000508461 ABCC11Q96J66 1382 aa15.94■□□□□ 0.14
SMG7-214ENST00000508461 GCC1Q96CN9 775 aa15.94■□□□□ 0.14
SMG7-214ENST00000508461 YEATS2Q9ULM3 1422 aa15.93■□□□□ 0.14
SMG7-214ENST00000508461 DDX11L8A8MPP1 907 aa15.93■□□□□ 0.14
SMG7-214ENST00000508461 MYOM2P54296 1465 aa15.93■□□□□ 0.14
SMG7-214ENST00000508461 KIF1BO60333 1816 aa15.93■□□□□ 0.14
SMG7-214ENST00000508461 DDX49Q9Y6V7 483 aaKnown RBP15.93■□□□□ 0.14
SMG7-214ENST00000508461 YTHDC2Q9H6S0 1430 aaKnown RBP15.93■□□□□ 0.14
SMG7-214ENST00000508461 MAP3K4Q9Y6R4 1608 aa15.93■□□□□ 0.14
SMG7-214ENST00000508461 CDC45O75419 566 aa15.93■□□□□ 0.14
SMG7-214ENST00000508461 ALDH1L2Q3SY69 923 aa15.93■□□□□ 0.14
SMG7-214ENST00000508461 F6X3S4 739 aa15.92■□□□□ 0.14
SMG7-214ENST00000508461 ZBTB40Q9NUA8 1239 aa15.92■□□□□ 0.14
SMG7-214ENST00000508461 HDAC1Q13547 482 aaPredicted RBP15.91■□□□□ 0.14
SMG7-214ENST00000508461 HSP90AB2PQ58FF8 381 aa15.91■□□□□ 0.14
SMG7-214ENST00000508461 RBM33Q96EV2 1170 aaKnown RBP15.91■□□□□ 0.14
SMG7-214ENST00000508461 RSPH6AQ9H0K4 717 aa15.91■□□□□ 0.14
SMG7-214ENST00000508461 ABCA6Q8N139 1617 aa15.91■□□□□ 0.14
SMG7-214ENST00000508461 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
SMG7-214ENST00000508461 IFT57Q9NWB7 429 aa15.9■□□□□ 0.14
SMG7-214ENST00000508461 EFCAB6Q5THR3 1501 aa15.9■□□□□ 0.14
SMG7-214ENST00000508461 VAMP4O75379 141 aa15.9■□□□□ 0.14
SMG7-214ENST00000508461 SHROOM2Q13796 1616 aa15.9■□□□□ 0.14
SMG7-214ENST00000508461 PLEKHF1Q96S99 279 aa15.89■□□□□ 0.13
SMG7-214ENST00000508461 ST18O60284 1047 aa15.88■□□□□ 0.13
SMG7-214ENST00000508461 CFAP44Q96MT7 982 aa15.88■□□□□ 0.13
SMG7-214ENST00000508461 ZNF692Q9BU19 519 aaPredicted RBP15.88■□□□□ 0.13
SMG7-214ENST00000508461 IL16Q14005 1332 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms