RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 FKBPLQ9UIM3 349 aa10.58□□□□□ -0.72
GYPA-205ENST00000508337 SOCS7O14512 581 aa10.57□□□□□ -0.72
GYPA-205ENST00000508337 ZNF697Q5TEC3 545 aa10.57□□□□□ -0.72
GYPA-205ENST00000508337 PTCRAQ6ISU1 281 aaPredicted RBP10.57□□□□□ -0.72
GYPA-205ENST00000508337 ZC3H4Q9UPT8 1303 aaKnown RBP10.57□□□□□ -0.72
GYPA-205ENST00000508337 LIAT1Q6ZQX7 453 aa10.56□□□□□ -0.72
GYPA-205ENST00000508337 BAP1Q92560 729 aa10.56□□□□□ -0.72
GYPA-205ENST00000508337 GPKOWQ92917 476 aaPredicted RBP eCLIP10.56□□□□□ -0.72
GYPA-205ENST00000508337 WNT7BP56706 349 aa10.55□□□□□ -0.72
GYPA-205ENST00000508337 ZNF511Q8NB15 262 aa10.55□□□□□ -0.72
GYPA-205ENST00000508337 MAGEB6P1A0A0J9YX57 407 aa10.54□□□□□ -0.72
GYPA-205ENST00000508337 ABL2P42684 1182 aa10.54□□□□□ -0.72
GYPA-205ENST00000508337 SPRYD7Q5W111 196 aa10.54□□□□□ -0.72
GYPA-205ENST00000508337 EHBP1Q8NDI1 1231 aa10.54□□□□□ -0.72
GYPA-205ENST00000508337 CARD14Q9BXL6 1004 aa10.54□□□□□ -0.72
GYPA-205ENST00000508337 FOXC1Q12948 553 aa10.53□□□□□ -0.72
GYPA-205ENST00000508337 BPHLQ86WA6 291 aaPredicted RBP10.53□□□□□ -0.72
GYPA-205ENST00000508337 EPS8L1Q8TE68 723 aa10.53□□□□□ -0.72
GYPA-205ENST00000508337 PTK2Q05397 1052 aa10.52□□□□□ -0.73
GYPA-205ENST00000508337 ZNF598Q86UK7 904 aaKnown RBP10.52□□□□□ -0.73
GYPA-205ENST00000508337 ARHGAP9Q9BRR9 750 aa10.52□□□□□ -0.73
GYPA-205ENST00000508337 TRIM34Q9BYJ4 488 aa10.52□□□□□ -0.73
GYPA-205ENST00000508337 TBC1D2BQ9UPU7 963 aa10.52□□□□□ -0.73
GYPA-205ENST00000508337 ZNF330Q9Y3S2 320 aaPredicted RBP10.52□□□□□ -0.73
GYPA-205ENST00000508337 ZBTB33Q86T24 672 aa10.51□□□□□ -0.73
GYPA-205ENST00000508337 GJD4Q96KN9 370 aaPredicted RBP10.51□□□□□ -0.73
GYPA-205ENST00000508337 GDPD2Q9HCC8 539 aa10.51□□□□□ -0.73
GYPA-205ENST00000508337 SH3BP2P78314 561 aa10.5□□□□□ -0.73
GYPA-205ENST00000508337 PDXDC2PQ6P474 469 aa10.49□□□□□ -0.73
GYPA-205ENST00000508337 C14orf37Q86TY3 774 aa10.49□□□□□ -0.73
GYPA-205ENST00000508337 RC3H1Q5TC82 1133 aaKnown RBP10.48□□□□□ -0.73
GYPA-205ENST00000508337 FAM174AQ8TBP5 190 aa10.48□□□□□ -0.73
GYPA-205ENST00000508337 FOXJ1Q92949 421 aa10.47□□□□□ -0.73
GYPA-205ENST00000508337 SLC10A4Q96EP9 437 aa10.47□□□□□ -0.73
GYPA-205ENST00000508337 TNFRSF10AO00220 468 aa10.46□□□□□ -0.73
GYPA-205ENST00000508337 VARSP26640 1264 aaKnown RBP10.46□□□□□ -0.73
GYPA-205ENST00000508337 ERICH6Q7L0X2 663 aa10.46□□□□□ -0.73
GYPA-205ENST00000508337 CYP4X1Q8N118 509 aa10.46□□□□□ -0.73
GYPA-205ENST00000508337 ZNF592Q92610 1267 aa10.46□□□□□ -0.73
GYPA-205ENST00000508337 EMID1Q96A84 441 aaPredicted RBP10.46□□□□□ -0.73
GYPA-205ENST00000508337 COG6Q9Y2V7 657 aa10.46□□□□□ -0.73
GYPA-205ENST00000508337 GPSM3Q9Y4H4 160 aa10.46□□□□□ -0.73
GYPA-205ENST00000508337 TTC24A2A3L6 582 aaPredicted RBP10.45□□□□□ -0.74
GYPA-205ENST00000508337 ZBBXA8MT70 800 aa10.45□□□□□ -0.74
GYPA-205ENST00000508337 WNT7AO00755 349 aa10.45□□□□□ -0.74
GYPA-205ENST00000508337 SKOR1P84550 965 aa10.45□□□□□ -0.74
GYPA-205ENST00000508337 ARID5BQ14865 1188 aa10.44□□□□□ -0.74
GYPA-205ENST00000508337 WASHC4Q2M389 1173 aa10.44□□□□□ -0.74
GYPA-205ENST00000508337 PDZRN3Q9UPQ7 1066 aa10.44□□□□□ -0.74
GYPA-205ENST00000508337 SH3BP5LQ7L8J4 393 aa10.43□□□□□ -0.74
GYPA-205ENST00000508337 DZIP3Q86Y13 1208 aaKnown RBP10.43□□□□□ -0.74
GYPA-205ENST00000508337 CLUAP1Q96AJ1 413 aa10.43□□□□□ -0.74
GYPA-205ENST00000508337 POM121Q96HA1 1249 aa10.43□□□□□ -0.74
GYPA-205ENST00000508337 MRGPRX2Q96LB1 330 aa10.43□□□□□ -0.74
GYPA-205ENST00000508337 PCDHB9Q9Y5E1 797 aa10.43□□□□□ -0.74
GYPA-205ENST00000508337 NR1H3Q13133 447 aa10.42□□□□□ -0.74
GYPA-205ENST00000508337 PROSER2Q86WR7 435 aaPredicted RBP10.42□□□□□ -0.74
GYPA-205ENST00000508337 ADAM32Q8TC27 787 aa10.41□□□□□ -0.74
GYPA-205ENST00000508337 WASF2Q9Y6W5 498 aa10.41□□□□□ -0.74
GYPA-205ENST00000508337 ALDH1A1P00352 501 aa10.4□□□□□ -0.74
GYPA-205ENST00000508337 FBXO45P0C2W1 286 aa10.4□□□□□ -0.74
GYPA-205ENST00000508337 EIF4G2P78344 907 aaKnown RBP eCLIP10.4□□□□□ -0.74
GYPA-205ENST00000508337 TLL2Q9Y6L7 1015 aa10.4□□□□□ -0.74
GYPA-205ENST00000508337 VAC14Q08AM6 782 aa10.39□□□□□ -0.75
GYPA-205ENST00000508337 ERFEQ4G0M1 354 aa10.39□□□□□ -0.75
GYPA-205ENST00000508337 VASH1Q7L8A9 365 aaPredicted RBP10.39□□□□□ -0.75
GYPA-205ENST00000508337 IRX2Q9BZI1 471 aaPredicted RBP10.39□□□□□ -0.75
GYPA-205ENST00000508337 CDV3Q9UKY7 258 aaKnown RBP10.39□□□□□ -0.75
GYPA-205ENST00000508337 NBPF20Q3BBV1 942 aa10.38□□□□□ -0.75
GYPA-205ENST00000508337 SH3RF1Q7Z6J0 888 aa10.38□□□□□ -0.75
GYPA-205ENST00000508337 SNIP1Q8TAD8 396 aaKnown RBP10.38□□□□□ -0.75
GYPA-205ENST00000508337 GFRA3O60609 400 aa10.37□□□□□ -0.75
GYPA-205ENST00000508337 PKD2L1Q9P0L9 805 aa10.37□□□□□ -0.75
GYPA-205ENST00000508337 PRR20EP86478 221 aa10.36□□□□□ -0.75
GYPA-205ENST00000508337 PRR20CP86479 221 aa10.36□□□□□ -0.75
GYPA-205ENST00000508337 PRR20DP86480 221 aa10.36□□□□□ -0.75
GYPA-205ENST00000508337 PRR20BP86481 221 aa10.36□□□□□ -0.75
GYPA-205ENST00000508337 PRR20AP86496 221 aa10.36□□□□□ -0.75
GYPA-205ENST00000508337 SEMA3FQ13275 785 aa10.36□□□□□ -0.75
GYPA-205ENST00000508337 LAPTM4AQ15012 233 aa10.36□□□□□ -0.75
GYPA-205ENST00000508337 C4orf48Q5BLP8 95 aa10.36□□□□□ -0.75
GYPA-205ENST00000508337 FAM187AA6NFU0 413 aa10.35□□□□□ -0.75
GYPA-205ENST00000508337 GDF9O60383 454 aa10.35□□□□□ -0.75
GYPA-205ENST00000508337 MCCD1P59942 119 aaPredicted RBP10.35□□□□□ -0.75
GYPA-205ENST00000508337 C1QTNF2Q9BXJ5 285 aa10.35□□□□□ -0.75
GYPA-205ENST00000508337 A6NJR5 290 aa10.34□□□□□ -0.75
GYPA-205ENST00000508337 FSHRP23945 695 aa10.34□□□□□ -0.75
GYPA-205ENST00000508337 SOX11P35716 441 aa10.34□□□□□ -0.75
GYPA-205ENST00000508337 RAB15P59190 212 aa10.34□□□□□ -0.75
GYPA-205ENST00000508337 IRF5Q13568 498 aa10.34□□□□□ -0.75
GYPA-205ENST00000508337 PKDCCQ504Y2 493 aa10.34□□□□□ -0.75
GYPA-205ENST00000508337 TRMT44Q8IYL2 757 aaKnown RBP10.34□□□□□ -0.75
GYPA-205ENST00000508337 NRG2O14511 850 aaPredicted RBP10.32□□□□□ -0.76
GYPA-205ENST00000508337 GPR37L1O60883 481 aa10.32□□□□□ -0.76
GYPA-205ENST00000508337 ADH1CP00326 375 aa10.32□□□□□ -0.76
GYPA-205ENST00000508337 ZMYND15Q9H091 742 aa10.32□□□□□ -0.76
GYPA-205ENST00000508337 TRIM52Q96A61 297 aa10.31□□□□□ -0.76
GYPA-205ENST00000508337 KCTD15Q96SI1 283 aaPredicted RBP10.31□□□□□ -0.76
GYPA-205ENST00000508337 MAP4K5Q9Y4K4 846 aa10.31□□□□□ -0.76
GYPA-205ENST00000508337 TRIM67Q6ZTA4 783 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms