RNA–Protein interactions for RNA: ENST00000508044.1

RACK1-218, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-218ENST00000508044 RALGAPBQ86X10 1494 aa15.29■□□□□ 0.04
RACK1-218ENST00000508044 NGDNQ8NEJ9 315 aaKnown RBP15.29■□□□□ 0.04
RACK1-218ENST00000508044 L3MBTL2Q969R5 705 aa15.29■□□□□ 0.04
RACK1-218ENST00000508044 NUDT16Q96DE0 195 aaKnown RBP15.29■□□□□ 0.04
RACK1-218ENST00000508044 CDK19Q9BWU1 502 aa15.29■□□□□ 0.04
RACK1-218ENST00000508044 PHRF1Q9P1Y6 1649 aaKnown RBP15.28■□□□□ 0.04
RACK1-218ENST00000508044 UNC5CLQ8IV45 518 aa15.28■□□□□ 0.04
RACK1-218ENST00000508044 GJD4Q96KN9 370 aaPredicted RBP15.28■□□□□ 0.04
RACK1-218ENST00000508044 FOXD4L1Q9NU39 408 aa15.28■□□□□ 0.04
RACK1-218ENST00000508044 BRWD3Q6RI45 1802 aa15.28■□□□□ 0.04
RACK1-218ENST00000508044 COL14A1Q05707 1796 aaKnown RBP15.27■□□□□ 0.04
RACK1-218ENST00000508044 ATAD2Q6PL18 1390 aa15.26■□□□□ 0.03
RACK1-218ENST00000508044 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
RACK1-218ENST00000508044 NEUROD1Q13562 356 aa15.26■□□□□ 0.03
RACK1-218ENST00000508044 CENPJQ9HC77 1338 aaPredicted RBP15.25■□□□□ 0.03
RACK1-218ENST00000508044 EP400Q96L91 3159 aa15.24■□□□□ 0.03
RACK1-218ENST00000508044 POLR3AO14802 1390 aaPredicted RBP15.24■□□□□ 0.03
RACK1-218ENST00000508044 FAM83GA6ND36 823 aa15.23■□□□□ 0.03
RACK1-218ENST00000508044 ACEP12821 1306 aa15.22■□□□□ 0.03
RACK1-218ENST00000508044 VPS72Q15906 364 aa15.22■□□□□ 0.03
RACK1-218ENST00000508044 PPIP5K1Q6PFW1 1433 aa15.22■□□□□ 0.03
RACK1-218ENST00000508044 NRKQ7Z2Y5 1582 aa15.21■□□□□ 0.03
RACK1-218ENST00000508044 SRPK2P78362 688 aaKnown RBP15.21■□□□□ 0.03
RACK1-218ENST00000508044 CABP2Q9NPB3 220 aa15.21■□□□□ 0.03
RACK1-218ENST00000508044 CCDC9Q9Y3X0 531 aaKnown RBP15.21■□□□□ 0.03
RACK1-218ENST00000508044 CCDC61Q9Y6R9 512 aa15.21■□□□□ 0.03
RACK1-218ENST00000508044 NUTM2GQ5VZR2 741 aa15.2■□□□□ 0.02
RACK1-218ENST00000508044 BTG4Q9NY30 223 aa15.2■□□□□ 0.02
RACK1-218ENST00000508044 ROCK2O75116 1388 aaKnown RBP15.2■□□□□ 0.02
RACK1-218ENST00000508044 PLEKHG3A1L390 1219 aa15.19■□□□□ 0.02
RACK1-218ENST00000508044 NBPF8Q3BBV2 869 aa15.19■□□□□ 0.02
RACK1-218ENST00000508044 SEPT12Q8IYM1 358 aa15.18■□□□□ 0.02
RACK1-218ENST00000508044 KIAA0232Q92628 1395 aa15.17■□□□□ 0.02
RACK1-218ENST00000508044 TRIM26Q12899 539 aaPredicted RBP15.17■□□□□ 0.02
RACK1-218ENST00000508044 PRDM11Q9NQV5 511 aa15.17■□□□□ 0.02
RACK1-218ENST00000508044 RNF216Q9NWF9 866 aaPredicted RBP15.16■□□□□ 0.02
RACK1-218ENST00000508044 CHRNA2Q15822 529 aa15.15■□□□□ 0.02
RACK1-218ENST00000508044 AKAP12Q02952 1782 aa15.15■□□□□ 0.02
RACK1-218ENST00000508044 THSD7AQ9UPZ6 1657 aa15.15■□□□□ 0.02
RACK1-218ENST00000508044 PIK3C2AO00443 1686 aa15.14■□□□□ 0.01
RACK1-218ENST00000508044 LMO7Q8WWI1 1683 aa15.14■□□□□ 0.01
RACK1-218ENST00000508044 A0A0G2JS52 829 aa15.14■□□□□ 0.01
RACK1-218ENST00000508044 ZC3H6P61129 1189 aaKnown RBP15.14■□□□□ 0.01
RACK1-218ENST00000508044 MYT1Q01538 1121 aa15.14■□□□□ 0.01
RACK1-218ENST00000508044 FAM98CQ17RN3 349 aaKnown RBP15.14■□□□□ 0.01
RACK1-218ENST00000508044 ABTB2Q8N961 1025 aa15.14■□□□□ 0.01
RACK1-218ENST00000508044 ONECUT3O60422 494 aaPredicted RBP15.13■□□□□ 0.01
RACK1-218ENST00000508044 USP6P35125 1406 aa15.13■□□□□ 0.01
RACK1-218ENST00000508044 CABP1Q9NZU7 370 aa15.13■□□□□ 0.01
RACK1-218ENST00000508044 EVC2Q86UK5 1308 aa15.13■□□□□ 0.01
RACK1-218ENST00000508044 TONSLQ96HA7 1378 aa15.12■□□□□ 0.01
RACK1-218ENST00000508044 USP19O94966 1318 aa15.12■□□□□ 0.01
RACK1-218ENST00000508044 SPATA31A5Q5VU36 1347 aa15.12■□□□□ 0.01
RACK1-218ENST00000508044 SPATA31A7Q8IWB4 1347 aa15.12■□□□□ 0.01
RACK1-218ENST00000508044 BLMP54132 1417 aaPredicted RBP15.11■□□□□ 0.01
RACK1-218ENST00000508044 KRT27Q7Z3Y8 459 aa15.11■□□□□ 0.01
RACK1-218ENST00000508044 CAMTA1Q9Y6Y1 1673 aa15.1■□□□□ 0.01
RACK1-218ENST00000508044 STRN4Q9NRL3 753 aa15.1■□□□□ 0.01
RACK1-218ENST00000508044 SLIT3O75094 1523 aa15.1■□□□□ 0.01
RACK1-218ENST00000508044 SSH2Q76I76 1423 aa15.09■□□□□ 0.01
RACK1-218ENST00000508044 MON2Q7Z3U7 1717 aa15.09■□□□□ 0.01
RACK1-218ENST00000508044 MAPK8IP2Q13387 824 aaPredicted RBP15.09■□□□□ 0.01
RACK1-218ENST00000508044 CCDC125Q86Z20 511 aa15.09■□□□□ 0.01
RACK1-218ENST00000508044 CARD11Q9BXL7 1154 aa15.09■□□□□ 0.01
RACK1-218ENST00000508044 BRD4O60885 1362 aaPredicted RBP15.09■□□□□ 0.01
RACK1-218ENST00000508044 NLRP13Q86W25 1043 aa15.08■□□□□ 0
RACK1-218ENST00000508044 SPATA31A1Q5TZJ5 1347 aa15.08■□□□□ 0
RACK1-218ENST00000508044 RGPD1P0DJD0 1748 aa15.08■□□□□ 0
RACK1-218ENST00000508044 CPDO75976 1380 aa15.08■□□□□ 0
RACK1-218ENST00000508044 GCP02774 474 aa15.07■□□□□ 0
RACK1-218ENST00000508044 SBNO2Q9Y2G9 1366 aa15.07■□□□□ 0
RACK1-218ENST00000508044 TNS1Q9HBL0 1735 aaKnown RBP15.06■□□□□ 0
RACK1-218ENST00000508044 FAM182BQ5T319 152 aa15.06■□□□□ 0
RACK1-218ENST00000508044 DEFB132Q7Z7B7 95 aa15.06■□□□□ 0
RACK1-218ENST00000508044 ZBTB7CA1YPR0 619 aa15.05■□□□□ -0
RACK1-218ENST00000508044 NLRP6P59044 892 aa15.05■□□□□ -0
RACK1-218ENST00000508044 USP35Q9P2H5 1018 aa15.05■□□□□ -0
RACK1-218ENST00000508044 CPSF1Q10570 1443 aaKnown RBP15.05■□□□□ -0
RACK1-218ENST00000508044 COL5A2P05997 1499 aaPredicted RBP15.05■□□□□ -0
RACK1-218ENST00000508044 COL18A1P39060 1754 aa15.05■□□□□ -0
RACK1-218ENST00000508044 RGPD5Q99666 1765 aa15.04■□□□□ -0
RACK1-218ENST00000508044 SF3B2Q13435 895 aaKnown RBP15.04■□□□□ -0
RACK1-218ENST00000508044 LARP1Q6PKG0 1096 aaKnown RBP15.04■□□□□ -0
RACK1-218ENST00000508044 TTC21BQ7Z4L5 1316 aa15.03■□□□□ -0
RACK1-218ENST00000508044 EVA1CP58658 441 aa15.03■□□□□ -0
RACK1-218ENST00000508044 WNK3Q9BYP7 1800 aa15.03■□□□□ -0
RACK1-218ENST00000508044 PARP4Q9UKK3 1724 aaKnown RBP15.03■□□□□ -0
RACK1-218ENST00000508044 CD163L1Q9NR16 1453 aa15.02■□□□□ -0
RACK1-218ENST00000508044 KTN1Q86UP2 1357 aaKnown RBP15.02■□□□□ -0
RACK1-218ENST00000508044 ZRANB1Q9UGI0 708 aa15.02■□□□□ -0
RACK1-218ENST00000508044 USP54Q70EL1 1684 aa15.02□□□□□ -0.01
RACK1-218ENST00000508044 ZNF692Q9BU19 519 aaPredicted RBP15.01□□□□□ -0.01
RACK1-218ENST00000508044 NFAT5O94916 1531 aa15□□□□□ -0.01
RACK1-218ENST00000508044 CRB1P82279 1406 aa15□□□□□ -0.01
RACK1-218ENST00000508044 LRRC37A3O60309 1634 aa14.99□□□□□ -0.01
RACK1-218ENST00000508044 AATKQ6ZMQ8 1374 aa14.99□□□□□ -0.01
RACK1-218ENST00000508044 TTC21AQ8NDW8 1320 aa14.99□□□□□ -0.01
RACK1-218ENST00000508044 SOX12O15370 315 aa14.99□□□□□ -0.01
RACK1-218ENST00000508044 BARGINQ6ZT62 677 aa14.99□□□□□ -0.01
RACK1-218ENST00000508044 LTN1O94822 1766 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms