RNA–Protein interactions for RNA: ENST00000507816.5

SEC31A-223, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 4

Gene SEC31A, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-223	ENST00000507816	SPATA31A7	Q8IWB4	1347 aa		29.51	■■■□□ 2.32
SEC31A-223	ENST00000507816	DISP2	A7MBM2	1401 aa		29.51	■■■□□ 2.31
SEC31A-223	ENST00000507816	PRR36	Q9H6K5	1346 aa		29.5	■■■□□ 2.31
SEC31A-223	ENST00000507816	HIRIP3	Q9BW71	556 aa	Predicted RBP	29.5	■■■□□ 2.31
SEC31A-223	ENST00000507816	THSD7A	Q9UPZ6	1657 aa		29.5	■■■□□ 2.31
SEC31A-223	ENST00000507816	CRYBG1	Q9Y4K1	1723 aa		29.48	■■■□□ 2.31
SEC31A-223	ENST00000507816	EN1	Q05925	392 aa	Predicted RBP	29.48	■■■□□ 2.31
SEC31A-223	ENST00000507816	TRAK1	Q9UPV9	953 aa		29.47	■■■□□ 2.31
SEC31A-223	ENST00000507816	MINK1	Q8N4C8	1332 aa	Predicted RBP	29.46	■■■□□ 2.31
SEC31A-223	ENST00000507816	WASL	O00401	505 aa	Predicted RBP	29.45	■■■□□ 2.31
SEC31A-223	ENST00000507816	FAM182B	Q5T319	152 aa		29.44	■■■□□ 2.3
SEC31A-223	ENST00000507816	PRDM11	Q9NQV5	511 aa		29.44	■■■□□ 2.3
SEC31A-223	ENST00000507816	TNS1	Q9HBL0	1735 aa	Known RBP	29.42	■■■□□ 2.3
SEC31A-223	ENST00000507816	NGDN	Q8NEJ9	315 aa	Known RBP	29.42	■■■□□ 2.3
SEC31A-223	ENST00000507816	R3HDM1	Q15032	1099 aa	Known RBP	29.4	■■■□□ 2.3
SEC31A-223	ENST00000507816	PAK3	O75914	559 aa	Predicted RBP	29.39	■■■□□ 2.3
SEC31A-223	ENST00000507816	SPATA31A1	Q5TZJ5	1347 aa		29.39	■■■□□ 2.3
SEC31A-223	ENST00000507816	ATP7B	P35670	1465 aa		29.38	■■■□□ 2.29
SEC31A-223	ENST00000507816	KIAA0232	Q92628	1395 aa		29.38	■■■□□ 2.29
SEC31A-223	ENST00000507816	EZH2	Q15910	746 aa	Known RBP	29.34	■■■□□ 2.29
SEC31A-223	ENST00000507816	ITSN1	Q15811	1721 aa		29.34	■■■□□ 2.29
SEC31A-223	ENST00000507816	FAM196A	Q6ZSG2	479 aa		29.33	■■■□□ 2.29
SEC31A-223	ENST00000507816	PARD3	Q8TEW0	1356 aa		29.33	■■■□□ 2.29
SEC31A-223	ENST00000507816	RAB3GAP2	Q9H2M9	1393 aa		29.33	■■■□□ 2.29
SEC31A-223	ENST00000507816	PHRF1	Q9P1Y6	1649 aa	Known RBP	29.33	■■■□□ 2.29
SEC31A-223	ENST00000507816	STAC3	Q96MF2	364 aa		29.32	■■■□□ 2.28
SEC31A-223	ENST00000507816	CAMKK2	Q96RR4	588 aa		29.32	■■■□□ 2.28
SEC31A-223	ENST00000507816	CHRNA2	Q15822	529 aa		29.31	■■■□□ 2.28
SEC31A-223	ENST00000507816	DCAF11	Q8TEB1	546 aa		29.31	■■■□□ 2.28
SEC31A-223	ENST00000507816	KDM2A	Q9Y2K7	1162 aa		29.31	■■■□□ 2.28
SEC31A-223	ENST00000507816	TRIM37	O94972	964 aa		29.3	■■■□□ 2.28
SEC31A-223	ENST00000507816	NUDT16	Q96DE0	195 aa	Known RBP	29.3	■■■□□ 2.28
SEC31A-223	ENST00000507816	ARHGEF28	Q8N1W1	1705 aa	Known RBP	29.29	■■■□□ 2.28
SEC31A-223	ENST00000507816	STRN4	Q9NRL3	753 aa		29.29	■■■□□ 2.28
SEC31A-223	ENST00000507816	SSH2	Q76I76	1423 aa		29.27	■■■□□ 2.28
SEC31A-223	ENST00000507816	POLR3A	O14802	1390 aa	Predicted RBP	29.26	■■■□□ 2.28
SEC31A-223	ENST00000507816	ZC3H6	P61129	1189 aa	Known RBP	29.25	■■■□□ 2.27
SEC31A-223	ENST00000507816	BARGIN	Q6ZT62	677 aa		29.25	■■■□□ 2.27
SEC31A-223	ENST00000507816	APBA3	O96018	575 aa		29.24	■■■□□ 2.27
SEC31A-223	ENST00000507816	NRK	Q7Z2Y5	1582 aa		29.23	■■■□□ 2.27
SEC31A-223	ENST00000507816	TOPAZ1	Q8N9V7	1692 aa		29.23	■■■□□ 2.27
SEC31A-223	ENST00000507816	RREB1	Q92766	1687 aa		29.22	■■■□□ 2.27
SEC31A-223	ENST00000507816	USP35	Q9P2H5	1018 aa		29.22	■■■□□ 2.27
SEC31A-223	ENST00000507816	NUTM2G	Q5VZR2	741 aa		29.21	■■■□□ 2.27
SEC31A-223	ENST00000507816	PDE3B	Q13370	1112 aa		29.2	■■■□□ 2.26
SEC31A-223	ENST00000507816	CDK19	Q9BWU1	502 aa		29.2	■■■□□ 2.26
SEC31A-223	ENST00000507816	ACE	P12821	1306 aa		29.2	■■■□□ 2.26
SEC31A-223	ENST00000507816	CPD	O75976	1380 aa		29.19	■■■□□ 2.26
SEC31A-223	ENST00000507816	EVA1C	P58658	441 aa		29.19	■■■□□ 2.26
SEC31A-223	ENST00000507816	CAMTA1	Q9Y6Y1	1673 aa		29.18	■■■□□ 2.26
SEC31A-223	ENST00000507816	CCDC61	Q9Y6R9	512 aa		29.18	■■■□□ 2.26
SEC31A-223	ENST00000507816	LMO7	Q8WWI1	1683 aa		29.18	■■■□□ 2.26
SEC31A-223	ENST00000507816	NBPF8	Q3BBV2	869 aa		29.17	■■■□□ 2.26
SEC31A-223	ENST00000507816	TCP11L2	Q8N4U5	519 aa		29.17	■■■□□ 2.26
SEC31A-223	ENST00000507816	USP19	O94966	1318 aa		29.17	■■■□□ 2.26
SEC31A-223	ENST00000507816	NUP188	Q5SRE5	1749 aa		29.17	■■■□□ 2.26
SEC31A-223	ENST00000507816	PLEKHG3	A1L390	1219 aa		29.16	■■■□□ 2.26
SEC31A-223	ENST00000507816	LARP1	Q6PKG0	1096 aa	Known RBP	29.16	■■■□□ 2.26
SEC31A-223	ENST00000507816	NBPF14	Q5TI25	921 aa		29.13	■■■□□ 2.25
SEC31A-223	ENST00000507816	ABTB2	Q8N961	1025 aa		29.13	■■■□□ 2.25
SEC31A-223	ENST00000507816	THRAP3	Q9Y2W1	955 aa	Known RBP	29.13	■■■□□ 2.25
SEC31A-223	ENST00000507816	COL5A2	P05997	1499 aa	Predicted RBP	29.1	■■■□□ 2.25
SEC31A-223	ENST00000507816	PARP4	Q9UKK3	1724 aa	Known RBP	29.08	■■■□□ 2.25
SEC31A-223	ENST00000507816	C11orf95	C9JLR9	678 aa	Predicted RBP	29.07	■■■□□ 2.24
SEC31A-223	ENST00000507816	KIAA1210	Q9ULL0	1709 aa		29.06	■■■□□ 2.24
SEC31A-223	ENST00000507816	GC	P02774	474 aa		29.06	■■■□□ 2.24
SEC31A-223	ENST00000507816	NLRP13	Q86W25	1043 aa		29.06	■■■□□ 2.24
SEC31A-223	ENST00000507816	CRB1	P82279	1406 aa		29.04	■■■□□ 2.24
SEC31A-223	ENST00000507816	PPIP5K1	Q6PFW1	1433 aa		29.04	■■■□□ 2.24
SEC31A-223	ENST00000507816	OVOS2	A0A0G2JMS6	1433 aa		29.03	■■■□□ 2.24
SEC31A-223	ENST00000507816	OVOS2	A0A0J9YW53	1432 aa		29.03	■■■□□ 2.24
SEC31A-223	ENST00000507816	OVOS2	Q6IE36	1432 aa		29.03	■■■□□ 2.24
SEC31A-223	ENST00000507816	BRD4	O60885	1362 aa	Predicted RBP	29.03	■■■□□ 2.24
SEC31A-223	ENST00000507816	YY1	P25490	414 aa		29.03	■■■□□ 2.24
SEC31A-223	ENST00000507816	SPON1	Q9HCB6	807 aa		29.03	■■■□□ 2.24
SEC31A-223	ENST00000507816	NINL	Q9Y2I6	1382 aa		29.01	■■■□□ 2.23
SEC31A-223	ENST00000507816	PEAK1	Q9H792	1746 aa		29	■■■□□ 2.23
SEC31A-223	ENST00000507816	PPP1R1B	Q9UD71	204 aa	Predicted RBP	29	■■■□□ 2.23
SEC31A-223	ENST00000507816	RGPD3	A6NKT7	1758 aa	Predicted RBP	29	■■■□□ 2.23
SEC31A-223	ENST00000507816	RGPD4	Q7Z3J3	1758 aa		29	■■■□□ 2.23
SEC31A-223	ENST00000507816	KCNQ2	O43526	872 aa		28.99	■■■□□ 2.23
SEC31A-223	ENST00000507816	SRPK2	P78362	688 aa	Known RBP	28.99	■■■□□ 2.23
SEC31A-223	ENST00000507816	AATK	Q6ZMQ8	1374 aa		28.98	■■■□□ 2.23
SEC31A-223	ENST00000507816	LRRC37A3	O60309	1634 aa		28.98	■■■□□ 2.23
SEC31A-223	ENST00000507816	SLIT3	O75094	1523 aa		28.97	■■■□□ 2.23
SEC31A-223	ENST00000507816	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.95	■■■□□ 2.23
SEC31A-223	ENST00000507816	USP6	P35125	1406 aa		28.95	■■■□□ 2.23
SEC31A-223	ENST00000507816	NBPF1	Q3BBV0	1214 aa		28.95	■■■□□ 2.22
SEC31A-223	ENST00000507816	PLSCR1	O15162	318 aa		28.94	■■■□□ 2.22
SEC31A-223	ENST00000507816	CABP2	Q9NPB3	220 aa		28.94	■■■□□ 2.22
SEC31A-223	ENST00000507816	DDB1	Q16531	1140 aa		28.92	■■■□□ 2.22
SEC31A-223	ENST00000507816	ZBTB7C	A1YPR0	619 aa		28.91	■■■□□ 2.22
SEC31A-223	ENST00000507816	DCAF8L1	A6NGE4	600 aa		28.91	■■■□□ 2.22
SEC31A-223	ENST00000507816	NLRP6	P59044	892 aa		28.91	■■■□□ 2.22
SEC31A-223	ENST00000507816	ANO8	Q9HCE9	1232 aa	Predicted RBP	28.9	■■■□□ 2.22
SEC31A-223	ENST00000507816	BCL9	O00512	1426 aa		28.89	■■■□□ 2.22
SEC31A-223	ENST00000507816	TOM1L2	Q6ZVM7	507 aa		28.89	■■■□□ 2.22
SEC31A-223	ENST00000507816	BCL11B	Q9C0K0	894 aa	Predicted RBP	28.89	■■■□□ 2.22
SEC31A-223	ENST00000507816	CABP1	Q9NZU7	370 aa		28.88	■■■□□ 2.21
SEC31A-223	ENST00000507816	CASZ1	Q86V15	1759 aa		28.88	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms