RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 PPP6R1Q9UPN7 881 aa28.38■■■□□ 2.13
SPCS3-203ENST00000507678 ARHGEF40Q8TER5 1519 aa28.38■■■□□ 2.13
SPCS3-203ENST00000507678 NCKAP5LQ9HCH0 1330 aa28.37■■■□□ 2.13
SPCS3-203ENST00000507678 PLEKHF1Q96S99 279 aa28.37■■■□□ 2.13
SPCS3-203ENST00000507678 PLPPR3Q6T4P5 718 aa28.36■■■□□ 2.13
SPCS3-203ENST00000507678 AGLP35573 1532 aa28.35■■■□□ 2.13
SPCS3-203ENST00000507678 RIPK4P57078 832 aa28.34■■■□□ 2.13
SPCS3-203ENST00000507678 EXOSC9Q06265 439 aaKnown RBP28.34■■■□□ 2.13
SPCS3-203ENST00000507678 LAS1LQ9Y4W2 734 aaKnown RBP28.34■■■□□ 2.13
SPCS3-203ENST00000507678 METP08581 1390 aa28.33■■■□□ 2.13
SPCS3-203ENST00000507678 NLRP1Q9C000 1473 aa28.33■■■□□ 2.13
SPCS3-203ENST00000507678 TRIM35Q9UPQ4 493 aa28.33■■■□□ 2.13
SPCS3-203ENST00000507678 ZMYM3Q14202 1370 aa28.33■■■□□ 2.13
SPCS3-203ENST00000507678 FAM161AQ3B820 660 aa28.33■■■□□ 2.13
SPCS3-203ENST00000507678 ZRANB1Q9UGI0 708 aa28.32■■■□□ 2.12
SPCS3-203ENST00000507678 C8orf34Q49A92 452 aa28.32■■■□□ 2.12
SPCS3-203ENST00000507678 SPATA31D1Q6ZQQ2 1576 aa28.31■■■□□ 2.12
SPCS3-203ENST00000507678 HMOX1P09601 288 aa28.3■■■□□ 2.12
SPCS3-203ENST00000507678 COL3A1P02461 1466 aaPredicted RBP28.3■■■□□ 2.12
SPCS3-203ENST00000507678 NME9Q86XW9 330 aa28.29■■■□□ 2.12
SPCS3-203ENST00000507678 SMC4Q9NTJ3 1288 aa28.29■■■□□ 2.12
SPCS3-203ENST00000507678 REREQ9P2R6 1566 aa28.28■■■□□ 2.12
SPCS3-203ENST00000507678 WASLO00401 505 aaPredicted RBP28.28■■■□□ 2.12
SPCS3-203ENST00000507678 SLC4A3P48751 1232 aa28.28■■■□□ 2.12
SPCS3-203ENST00000507678 POLKQ9UBT6 870 aa28.28■■■□□ 2.12
SPCS3-203ENST00000507678 PCDHB15Q9Y5E8 787 aa28.28■■■□□ 2.12
SPCS3-203ENST00000507678 NUTM2FA1L443 756 aa28.27■■■□□ 2.12
SPCS3-203ENST00000507678 FTSJ3Q8IY81 847 aaKnown RBP28.27■■■□□ 2.12
SPCS3-203ENST00000507678 EMILIN1Q9Y6C2 1016 aa28.27■■■□□ 2.12
SPCS3-203ENST00000507678 PRKAR2BP31323 418 aa28.26■■■□□ 2.11
SPCS3-203ENST00000507678 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.25■■■□□ 2.11
SPCS3-203ENST00000507678 ADGRB2O60241 1585 aa28.25■■■□□ 2.11
SPCS3-203ENST00000507678 PPIP5K1Q6PFW1 1433 aa28.24■■■□□ 2.11
SPCS3-203ENST00000507678 NUDT16Q96DE0 195 aaKnown RBP28.24■■■□□ 2.11
SPCS3-203ENST00000507678 ZKSCAN2Q63HK3 967 aa28.23■■■□□ 2.11
SPCS3-203ENST00000507678 MED14O60244 1454 aa28.22■■■□□ 2.11
SPCS3-203ENST00000507678 SSH1Q8WYL5 1049 aa28.22■■■□□ 2.11
SPCS3-203ENST00000507678 NEFMP07197 916 aa28.21■■■□□ 2.11
SPCS3-203ENST00000507678 RRS1Q15050 365 aaKnown RBP28.21■■■□□ 2.11
SPCS3-203ENST00000507678 THUMPD2Q9BTF0 503 aaKnown RBP28.2■■■□□ 2.11
SPCS3-203ENST00000507678 ANKRD26Q9UPS8 1709 aa28.2■■■□□ 2.11
SPCS3-203ENST00000507678 DZIP1LQ8IYY4 767 aaKnown RBP28.2■■■□□ 2.1
SPCS3-203ENST00000507678 CEBPAP49715 358 aaPredicted RBP28.19■■■□□ 2.1
SPCS3-203ENST00000507678 RTL5Q5HYW3 569 aaPredicted RBP28.19■■■□□ 2.1
SPCS3-203ENST00000507678 PNPLA6Q8IY17 1366 aa28.19■■■□□ 2.1
SPCS3-203ENST00000507678 PHACTR3Q96KR7 559 aa28.19■■■□□ 2.1
SPCS3-203ENST00000507678 KIF20BQ96Q89 1820 aa28.19■■■□□ 2.1
SPCS3-203ENST00000507678 DLC1Q96QB1 1528 aa28.18■■■□□ 2.1
SPCS3-203ENST00000507678 TNRQ92752 1358 aa28.18■■■□□ 2.1
SPCS3-203ENST00000507678 DDRGK1Q96HY6 314 aa28.18■■■□□ 2.1
SPCS3-203ENST00000507678 MVPQ14764 893 aaKnown RBP28.17■■■□□ 2.1
SPCS3-203ENST00000507678 PMFBP1Q8TBY8 1022 aa28.17■■■□□ 2.1
SPCS3-203ENST00000507678 RSPH6AQ9H0K4 717 aa28.17■■■□□ 2.1
SPCS3-203ENST00000507678 PNNQ9H307 717 aaKnown RBP28.17■■■□□ 2.1
SPCS3-203ENST00000507678 SETD1AO15047 1707 aaKnown RBP28.17■■■□□ 2.1
SPCS3-203ENST00000507678 FCHSD2O94868 740 aa28.17■■■□□ 2.1
SPCS3-203ENST00000507678 ATP7BP35670 1465 aa28.16■■■□□ 2.1
SPCS3-203ENST00000507678 TRIM27P14373 513 aa28.16■■■□□ 2.1
SPCS3-203ENST00000507678 ITPRIPQ8IWB1 547 aa28.16■■■□□ 2.1
SPCS3-203ENST00000507678 HDGFP51858 240 aaKnown RBP28.16■■■□□ 2.1
SPCS3-203ENST00000507678 DAXXQ9UER7 740 aaPredicted RBP28.16■■■□□ 2.1
SPCS3-203ENST00000507678 NOB1Q9ULX3 412 aaKnown RBP28.16■■■□□ 2.1
SPCS3-203ENST00000507678 NRXN3Q9Y4C0 1643 aa28.16■■■□□ 2.1
SPCS3-203ENST00000507678 NCBP3Q53F19 620 aaKnown RBP28.15■■■□□ 2.1
SPCS3-203ENST00000507678 CCDC61Q9Y6R9 512 aa28.15■■■□□ 2.1
SPCS3-203ENST00000507678 KIF13AQ9H1H9 1805 aa28.15■■■□□ 2.1
SPCS3-203ENST00000507678 COG3Q96JB2 828 aa28.15■■■□□ 2.1
SPCS3-203ENST00000507678 LRRC7Q96NW7 1537 aa28.13■■■□□ 2.09
SPCS3-203ENST00000507678 SLC26A8Q96RN1 970 aa28.12■■■□□ 2.09
SPCS3-203ENST00000507678 PDZRN3Q9UPQ7 1066 aa28.12■■■□□ 2.09
SPCS3-203ENST00000507678 SOX12O15370 315 aa28.11■■■□□ 2.09
SPCS3-203ENST00000507678 EDC4Q6P2E9 1401 aaKnown RBP28.11■■■□□ 2.09
SPCS3-203ENST00000507678 ELL2O00472 640 aaPredicted RBP28.11■■■□□ 2.09
SPCS3-203ENST00000507678 RWDD1Q9H446 243 aaPredicted RBP28.11■■■□□ 2.09
SPCS3-203ENST00000507678 PRR36Q9H6K5 1346 aa28.1■■■□□ 2.09
SPCS3-203ENST00000507678 CPSF1Q10570 1443 aaKnown RBP28.1■■■□□ 2.09
SPCS3-203ENST00000507678 MAP2P11137 1827 aaKnown RBP28.1■■■□□ 2.09
SPCS3-203ENST00000507678 SEC24BO95487 1268 aa28.1■■■□□ 2.09
SPCS3-203ENST00000507678 CT47B1P0C2W7 299 aaPredicted RBP28.09■■■□□ 2.09
SPCS3-203ENST00000507678 ATF7IPQ6VMQ6 1270 aa28.09■■■□□ 2.09
SPCS3-203ENST00000507678 LTKP29376 864 aa28.09■■■□□ 2.09
SPCS3-203ENST00000507678 ROBO2Q9HCK4 1378 aa28.09■■■□□ 2.09
SPCS3-203ENST00000507678 TMEM2Q9UHN6 1383 aa28.09■■■□□ 2.09
SPCS3-203ENST00000507678 IL16Q14005 1332 aa28.08■■■□□ 2.09
SPCS3-203ENST00000507678 IL13P35225 146 aa28.07■■■□□ 2.08
SPCS3-203ENST00000507678 CPS1P31327 1500 aa28.07■■■□□ 2.08
SPCS3-203ENST00000507678 TMEM57Q8N5G2 664 aa28.07■■■□□ 2.08
SPCS3-203ENST00000507678 NFE2L2Q16236 605 aa28.06■■■□□ 2.08
SPCS3-203ENST00000507678 FAM135BQ49AJ0 1406 aa28.06■■■□□ 2.08
SPCS3-203ENST00000507678 IL27Q8NEV9 243 aa28.05■■■□□ 2.08
SPCS3-203ENST00000507678 AAMPQ13685 434 aa28.04■■■□□ 2.08
SPCS3-203ENST00000507678 FAM83GA6ND36 823 aa28.03■■■□□ 2.08
SPCS3-203ENST00000507678 RTN4Q9NQC3 1192 aaKnown RBP28.03■■■□□ 2.08
SPCS3-203ENST00000507678 DCTN1Q14203 1278 aa28.02■■■□□ 2.08
SPCS3-203ENST00000507678 TSPYL6Q8N831 410 aa28.01■■■□□ 2.07
SPCS3-203ENST00000507678 DDX19BQ9UMR2 479 aa28.01■■■□□ 2.07
SPCS3-203ENST00000507678 ACEP12821 1306 aa27.99■■■□□ 2.07
SPCS3-203ENST00000507678 KIF16BQ96L93 1317 aa27.98■■■□□ 2.07
SPCS3-203ENST00000507678 IPO8O15397 1037 aaKnown RBP27.98■■■□□ 2.07
SPCS3-203ENST00000507678 CDC42BPGQ6DT37 1551 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms