RNA–Protein interactions for RNA: ENST00000506360.5

SH3TC1-210, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 5,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-210ENST00000506360 C1orf115Q9H7X2 142 aa19.43■□□□□ 0.7
SH3TC1-210ENST00000506360 EXOSC9Q06265 439 aaKnown RBP19.42■□□□□ 0.7
SH3TC1-210ENST00000506360 HIP1O00291 1037 aa19.42■□□□□ 0.7
SH3TC1-210ENST00000506360 TWISTNBQ3B726 338 aaPredicted RBP19.42■□□□□ 0.7
SH3TC1-210ENST00000506360 TTLL5Q6EMB2 1281 aa19.42■□□□□ 0.7
SH3TC1-210ENST00000506360 RNF214Q8ND24 703 aa19.42■□□□□ 0.7
SH3TC1-210ENST00000506360 CNNM1Q9NRU3 951 aa19.42■□□□□ 0.7
SH3TC1-210ENST00000506360 IGF1RP08069 1367 aa19.42■□□□□ 0.7
SH3TC1-210ENST00000506360 CDK5RAP3Q96JB5 506 aa19.42■□□□□ 0.7
SH3TC1-210ENST00000506360 TMEM132AQ24JP5 1023 aa19.42■□□□□ 0.7
SH3TC1-210ENST00000506360 CCDC173Q0VFZ6 552 aa19.41■□□□□ 0.7
SH3TC1-210ENST00000506360 TXNDC2Q86VQ3 553 aa19.41■□□□□ 0.7
SH3TC1-210ENST00000506360 ERC1Q8IUD2 1116 aa19.41■□□□□ 0.7
SH3TC1-210ENST00000506360 CCDC39Q9UFE4 941 aa19.41■□□□□ 0.7
SH3TC1-210ENST00000506360 PPP2R1AP30153 589 aa19.4■□□□□ 0.7
SH3TC1-210ENST00000506360 NEK4P51957 841 aa19.4■□□□□ 0.7
SH3TC1-210ENST00000506360 PROSER2Q86WR7 435 aaPredicted RBP19.4■□□□□ 0.7
SH3TC1-210ENST00000506360 VSIG10Q8N0Z9 540 aa19.4■□□□□ 0.7
SH3TC1-210ENST00000506360 NASPP49321 788 aaPredicted RBP19.4■□□□□ 0.7
SH3TC1-210ENST00000506360 CCDC158Q5M9N0 1113 aa19.4■□□□□ 0.7
SH3TC1-210ENST00000506360 PRAM1Q96QH2 718 aa19.4■□□□□ 0.7
SH3TC1-210ENST00000506360 GNAI2P04899 355 aa19.39■□□□□ 0.7
SH3TC1-210ENST00000506360 TATP17735 454 aaPredicted RBP19.39■□□□□ 0.7
SH3TC1-210ENST00000506360 HSP90B2PQ58FF3 399 aa19.39■□□□□ 0.7
SH3TC1-210ENST00000506360 KINO60870 393 aaKnown RBP19.39■□□□□ 0.69
SH3TC1-210ENST00000506360 SMC2O95347 1197 aa19.39■□□□□ 0.69
SH3TC1-210ENST00000506360 NFKBIBQ15653 356 aa19.39■□□□□ 0.69
SH3TC1-210ENST00000506360 CDCA7LQ96GN5 454 aa19.39■□□□□ 0.69
SH3TC1-210ENST00000506360 LETM1O95202 739 aaPredicted RBP19.38■□□□□ 0.69
SH3TC1-210ENST00000506360 TRIM5Q9C035 493 aa19.38■□□□□ 0.69
SH3TC1-210ENST00000506360 AFAP1Q8N556 730 aa19.38■□□□□ 0.69
SH3TC1-210ENST00000506360 TXLNAP40222 546 aa19.38■□□□□ 0.69
SH3TC1-210ENST00000506360 NOB1Q9ULX3 412 aaKnown RBP19.38■□□□□ 0.69
SH3TC1-210ENST00000506360 PDZRN3Q9UPQ7 1066 aa19.38■□□□□ 0.69
SH3TC1-210ENST00000506360 CAVIN1Q6NZI2 390 aaKnown RBP19.37■□□□□ 0.69
SH3TC1-210ENST00000506360 GNL3LQ9NVN8 582 aaKnown RBP19.37■□□□□ 0.69
SH3TC1-210ENST00000506360 MAGEC2Q9UBF1 373 aaPredicted RBP19.37■□□□□ 0.69
SH3TC1-210ENST00000506360 KRT18P05783 430 aaKnown RBP19.36■□□□□ 0.69
SH3TC1-210ENST00000506360 SLC4A2P04920 1241 aa19.36■□□□□ 0.69
SH3TC1-210ENST00000506360 NCOA2Q15596 1464 aa19.36■□□□□ 0.69
SH3TC1-210ENST00000506360 CEBPZQ03701 1054 aaKnown RBP19.36■□□□□ 0.69
SH3TC1-210ENST00000506360 ZNF396Q96N95 335 aaPredicted RBP19.36■□□□□ 0.69
SH3TC1-210ENST00000506360 FMNL2Q96PY5 1086 aa19.36■□□□□ 0.69
SH3TC1-210ENST00000506360 HDGFL1Q5TGJ6 251 aa19.36■□□□□ 0.69
SH3TC1-210ENST00000506360 LRRC9Q6ZRR7 1453 aa19.35■□□□□ 0.69
SH3TC1-210ENST00000506360 PDCP20941 246 aa19.35■□□□□ 0.69
SH3TC1-210ENST00000506360 CABP4P57796 275 aa19.35■□□□□ 0.69
SH3TC1-210ENST00000506360 GCC1Q96CN9 775 aa19.35■□□□□ 0.69
SH3TC1-210ENST00000506360 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.35■□□□□ 0.69
SH3TC1-210ENST00000506360 MRE11P49959 708 aa19.35■□□□□ 0.69
SH3TC1-210ENST00000506360 FILIP1LQ4L180 1135 aa19.35■□□□□ 0.69
SH3TC1-210ENST00000506360 CCAR1Q8IX12 1150 aaKnown RBP19.35■□□□□ 0.69
SH3TC1-210ENST00000506360 TSR2Q969E8 191 aaKnown RBP19.35■□□□□ 0.69
SH3TC1-210ENST00000506360 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.699e-7■■■■■ 31
SH3TC1-210ENST00000506360 BRPF1P55201 1214 aaPredicted RBP19.35■□□□□ 0.69
SH3TC1-210ENST00000506360 ATP2B2Q01814 1243 aa19.35■□□□□ 0.69
SH3TC1-210ENST00000506360 ZNF428Q96B54 188 aa19.35■□□□□ 0.69
SH3TC1-210ENST00000506360 MCM2P49736 904 aa19.35■□□□□ 0.69
SH3TC1-210ENST00000506360 STK38Q15208 465 aa19.35■□□□□ 0.69
SH3TC1-210ENST00000506360 STK11IPQ8N1F8 1099 aa19.35■□□□□ 0.69
SH3TC1-210ENST00000506360 SMARCE1Q969G3 411 aa19.34■□□□□ 0.69
SH3TC1-210ENST00000506360 SIL1Q9H173 461 aa19.34■□□□□ 0.69
SH3TC1-210ENST00000506360 PRPF40AO75400 957 aaKnown RBP19.34■□□□□ 0.69
SH3TC1-210ENST00000506360 WWC2Q6AWC2 1192 aa19.34■□□□□ 0.69
SH3TC1-210ENST00000506360 TSPY26PQ9H489 355 aa19.34■□□□□ 0.69
SH3TC1-210ENST00000506360 RDXP35241 583 aaKnown RBP19.33■□□□□ 0.69
SH3TC1-210ENST00000506360 RABEP1Q15276 862 aa19.33■□□□□ 0.69
SH3TC1-210ENST00000506360 SULT6B1Q6IMI4 303 aa19.33■□□□□ 0.69
SH3TC1-210ENST00000506360 FIBPO43427 364 aa19.33■□□□□ 0.68
SH3TC1-210ENST00000506360 MBD3O95983 291 aa19.33■□□□□ 0.68
SH3TC1-210ENST00000506360 PPP1R1BQ9UD71 204 aaPredicted RBP19.33■□□□□ 0.68
SH3TC1-210ENST00000506360 TRAK2O60296 914 aa19.33■□□□□ 0.68
SH3TC1-210ENST00000506360 DDX54Q8TDD1 881 aaKnown RBP19.32■□□□□ 0.68
SH3TC1-210ENST00000506360 CDK19Q9BWU1 502 aa19.32■□□□□ 0.68
SH3TC1-210ENST00000506360 STK3Q13188 491 aa19.32■□□□□ 0.68
SH3TC1-210ENST00000506360 TOM1L2Q6ZVM7 507 aa19.32■□□□□ 0.68
SH3TC1-210ENST00000506360 MYO6Q9UM54 1294 aa19.31■□□□□ 0.68
SH3TC1-210ENST00000506360 SYCP1Q15431 976 aa19.31■□□□□ 0.68
SH3TC1-210ENST00000506360 SCAPERQ9BY12 1400 aa19.31■□□□□ 0.68
SH3TC1-210ENST00000506360 MAP4K4O95819 1239 aaPredicted RBP19.31■□□□□ 0.68
SH3TC1-210ENST00000506360 CCT4P50991 539 aaKnown RBP19.31■□□□□ 0.68
SH3TC1-210ENST00000506360 DCAF8L1A6NGE4 600 aa19.3■□□□□ 0.68
SH3TC1-210ENST00000506360 LRRCC1Q9C099 1032 aa19.3■□□□□ 0.68
SH3TC1-210ENST00000506360 SKIDA1Q1XH10 827 aa19.3■□□□□ 0.68
SH3TC1-210ENST00000506360 MYL6BP14649 208 aa19.3■□□□□ 0.68
SH3TC1-210ENST00000506360 ERCC4Q92889 916 aaPredicted RBP19.3■□□□□ 0.68
SH3TC1-210ENST00000506360 CYP46A1Q9Y6A2 500 aa19.3■□□□□ 0.68
SH3TC1-210ENST00000506360 ZNF530Q6P9A1 599 aaPredicted RBP19.3■□□□□ 0.68
SH3TC1-210ENST00000506360 NACAP1Q9BZK3 213 aa19.3■□□□□ 0.68
SH3TC1-210ENST00000506360 PNISRQ8TF01 805 aaKnown RBP19.29■□□□□ 0.68
SH3TC1-210ENST00000506360 CABP1Q9NZU7 370 aa19.29■□□□□ 0.68
SH3TC1-210ENST00000506360 NUTM2BA6NNL0 878 aaPredicted RBP19.29■□□□□ 0.68
SH3TC1-210ENST00000506360 NUTM2EB1AL46 878 aaPredicted RBP19.29■□□□□ 0.68
SH3TC1-210ENST00000506360 NUTM2AQ8IVF1 878 aaPredicted RBP19.29■□□□□ 0.68
SH3TC1-210ENST00000506360 SRCIN1Q9C0H9 1055 aa19.29■□□□□ 0.68
SH3TC1-210ENST00000506360 PIP4K2AP48426 406 aaPredicted RBP19.28■□□□□ 0.68
SH3TC1-210ENST00000506360 SLC12A5Q9H2X9 1139 aa19.28■□□□□ 0.68
SH3TC1-210ENST00000506360 SPG7Q9UQ90 795 aa19.28■□□□□ 0.68
SH3TC1-210ENST00000506360 CASKIN1Q8WXD9 1431 aa19.28■□□□□ 0.68
SH3TC1-210ENST00000506360 CCDC69A6NI79 296 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms