RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 AATKQ6ZMQ8 1374 aa22.59■■□□□ 1.21
TRAPPC11-204ENST00000505676 ITSN1Q15811 1721 aa22.59■■□□□ 1.21
TRAPPC11-204ENST00000505676 TCP11L2Q8N4U5 519 aa22.58■■□□□ 1.2
TRAPPC11-204ENST00000505676 CEP170BQ9Y4F5 1589 aaPredicted RBP22.58■■□□□ 1.2
TRAPPC11-204ENST00000505676 TOPAZ1Q8N9V7 1692 aa22.57■■□□□ 1.2
TRAPPC11-204ENST00000505676 U2AF1L5P0DN76 240 aaPredicted RBP22.57■■□□□ 1.2
TRAPPC11-204ENST00000505676 U2AF1Q01081 240 aaKnown RBP eCLIP22.57■■□□□ 1.2
TRAPPC11-204ENST00000505676 DIAPH1O60610 1272 aaKnown RBP22.55■■□□□ 1.2
TRAPPC11-204ENST00000505676 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.54■■□□□ 1.2
TRAPPC11-204ENST00000505676 ZNF142P52746 1687 aaPredicted RBP22.54■■□□□ 1.2
TRAPPC11-204ENST00000505676 PTPRUQ92729 1446 aa22.53■■□□□ 1.2
TRAPPC11-204ENST00000505676 CDK12Q9NYV4 1490 aaPredicted RBP22.53■■□□□ 1.2
TRAPPC11-204ENST00000505676 PLEKHG3A1L390 1219 aa22.53■■□□□ 1.2
TRAPPC11-204ENST00000505676 XRN1Q8IZH2 1706 aaKnown RBP22.52■■□□□ 1.2
TRAPPC11-204ENST00000505676 EXOC6Q8TAG9 804 aa22.52■■□□□ 1.2
TRAPPC11-204ENST00000505676 MYH16Q9H6N6 1097 aa22.51■■□□□ 1.19
TRAPPC11-204ENST00000505676 MAPK8IP3Q9UPT6 1336 aa22.51■■□□□ 1.19
TRAPPC11-204ENST00000505676 CT47B1P0C2W7 299 aaPredicted RBP22.5■■□□□ 1.19
TRAPPC11-204ENST00000505676 RIMS1Q86UR5 1692 aaKnown RBP22.5■■□□□ 1.19
TRAPPC11-204ENST00000505676 COG3Q96JB2 828 aa22.5■■□□□ 1.19
TRAPPC11-204ENST00000505676 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.5■■□□□ 1.19
TRAPPC11-204ENST00000505676 AMOTL2Q9Y2J4 779 aa22.5■■□□□ 1.19
TRAPPC11-204ENST00000505676 ADAMTSL3P82987 1691 aa22.49■■□□□ 1.19
TRAPPC11-204ENST00000505676 FCHSD2O94868 740 aa22.49■■□□□ 1.19
TRAPPC11-204ENST00000505676 PLEKHF1Q96S99 279 aa22.49■■□□□ 1.19
TRAPPC11-204ENST00000505676 NRKQ7Z2Y5 1582 aa22.49■■□□□ 1.19
TRAPPC11-204ENST00000505676 IL16Q14005 1332 aa22.49■■□□□ 1.19
TRAPPC11-204ENST00000505676 PRR36Q9H6K5 1346 aa22.49■■□□□ 1.19
TRAPPC11-204ENST00000505676 POLKQ9UBT6 870 aa22.47■■□□□ 1.19
TRAPPC11-204ENST00000505676 ANKARQ7Z5J8 1434 aa22.47■■□□□ 1.19
TRAPPC11-204ENST00000505676 U2SURPO15042 1029 aaKnown RBP22.47■■□□□ 1.19
TRAPPC11-204ENST00000505676 NEFMP07197 916 aa22.47■■□□□ 1.19
TRAPPC11-204ENST00000505676 SLC26A8Q96RN1 970 aa22.47■■□□□ 1.19
TRAPPC11-204ENST00000505676 SPINK5Q9NQ38 1064 aaPredicted RBP22.47■■□□□ 1.19
TRAPPC11-204ENST00000505676 RBM19Q9Y4C8 960 aaKnown RBP22.46■■□□□ 1.19
TRAPPC11-204ENST00000505676 USP6P35125 1406 aa22.44■■□□□ 1.18
TRAPPC11-204ENST00000505676 CRBNQ96SW2 442 aa22.44■■□□□ 1.18
TRAPPC11-204ENST00000505676 TTC21AQ8NDW8 1320 aa22.44■■□□□ 1.18
TRAPPC11-204ENST00000505676 TMPOP42166 694 aaKnown RBP22.43■■□□□ 1.18
TRAPPC11-204ENST00000505676 PDE3AQ14432 1141 aa22.43■■□□□ 1.18
TRAPPC11-204ENST00000505676 AAMPQ13685 434 aa22.43■■□□□ 1.18
TRAPPC11-204ENST00000505676 MAP2P11137 1827 aaKnown RBP22.42■■□□□ 1.18
TRAPPC11-204ENST00000505676 PLIN1O60240 522 aa22.42■■□□□ 1.18
TRAPPC11-204ENST00000505676 NME9Q86XW9 330 aa22.42■■□□□ 1.18
TRAPPC11-204ENST00000505676 ANKLE2Q86XL3 938 aa22.42■■□□□ 1.18
TRAPPC11-204ENST00000505676 TTC21BQ7Z4L5 1316 aa22.41■■□□□ 1.18
TRAPPC11-204ENST00000505676 SETD1BQ9UPS6 1966 aaKnown RBP22.41■■□□□ 1.18
TRAPPC11-204ENST00000505676 OVOS2A0A0J9YW53 1432 aa22.41■■□□□ 1.18
TRAPPC11-204ENST00000505676 OVOS2Q6IE36 1432 aa22.41■■□□□ 1.18
TRAPPC11-204ENST00000505676 RRP7AQ9Y3A4 280 aaKnown RBP22.41■■□□□ 1.18
TRAPPC11-204ENST00000505676 DMRT2Q9Y5R5 561 aa22.41■■□□□ 1.18
TRAPPC11-204ENST00000505676 ACEP12821 1306 aa22.4■■□□□ 1.18
TRAPPC11-204ENST00000505676 NEUROD2Q15784 382 aa22.4■■□□□ 1.18
TRAPPC11-204ENST00000505676 SSH2Q76I76 1423 aa22.4■■□□□ 1.18
TRAPPC11-204ENST00000505676 LRRC7Q96NW7 1537 aa22.39■■□□□ 1.17
TRAPPC11-204ENST00000505676 NALCNQ8IZF0 1738 aa22.38■■□□□ 1.17
TRAPPC11-204ENST00000505676 CALD1Q05682 793 aaKnown RBP22.38■■□□□ 1.17
TRAPPC11-204ENST00000505676 USP31Q70CQ4 1352 aa22.38■■□□□ 1.17
TRAPPC11-204ENST00000505676 RSPH6AQ9H0K4 717 aa22.37■■□□□ 1.17
TRAPPC11-204ENST00000505676 TCERG1O14776 1098 aaKnown RBP22.37■■□□□ 1.17
TRAPPC11-204ENST00000505676 IL13P35225 146 aa22.36■■□□□ 1.17
TRAPPC11-204ENST00000505676 PLPPR3Q6T4P5 718 aa22.35■■□□□ 1.17
TRAPPC11-204ENST00000505676 NCKAP5LQ9HCH0 1330 aa22.34■■□□□ 1.17
TRAPPC11-204ENST00000505676 FANCIQ9NVI1 1328 aa22.34■■□□□ 1.17
TRAPPC11-204ENST00000505676 RARSP54136 660 aaKnown RBP22.34■■□□□ 1.17
TRAPPC11-204ENST00000505676 TRIM35Q9UPQ4 493 aa22.34■■□□□ 1.17
TRAPPC11-204ENST00000505676 FMN2Q9NZ56 1722 aa22.34■■□□□ 1.17
TRAPPC11-204ENST00000505676 MS4A1P11836 297 aa22.34■■□□□ 1.17
TRAPPC11-204ENST00000505676 CENPQQ7L2Z9 268 aaPredicted RBP22.34■■□□□ 1.17
TRAPPC11-204ENST00000505676 RIPK4P57078 832 aa22.33■■□□□ 1.17
TRAPPC11-204ENST00000505676 LMOD3Q0VAK6 560 aa22.33■■□□□ 1.17
TRAPPC11-204ENST00000505676 C20orf194Q5TEA3 1177 aa22.33■■□□□ 1.17
TRAPPC11-204ENST00000505676 CHD2O14647 1828 aaKnown RBP22.33■■□□□ 1.17
TRAPPC11-204ENST00000505676 PPM1GO15355 546 aaPredicted RBP22.33■■□□□ 1.16
TRAPPC11-204ENST00000505676 EMILIN1Q9Y6C2 1016 aa22.33■■□□□ 1.16
TRAPPC11-204ENST00000505676 DNAJC5Q9H3Z4 198 aa22.32■■□□□ 1.16
TRAPPC11-204ENST00000505676 BCAR3O75815 825 aa22.31■■□□□ 1.16
TRAPPC11-204ENST00000505676 CANXP27824 592 aaKnown RBP22.31■■□□□ 1.16
TRAPPC11-204ENST00000505676 ZNF428Q96B54 188 aa22.31■■□□□ 1.16
TRAPPC11-204ENST00000505676 PRKAR2BP31323 418 aa22.31■■□□□ 1.16
TRAPPC11-204ENST00000505676 NFE2L2Q16236 605 aa22.31■■□□□ 1.16
TRAPPC11-204ENST00000505676 USP54Q70EL1 1684 aa22.3■■□□□ 1.16
TRAPPC11-204ENST00000505676 KCNA6P17658 529 aa22.3■■□□□ 1.16
TRAPPC11-204ENST00000505676 KIF24Q5T7B8 1368 aa22.29■■□□□ 1.16
TRAPPC11-204ENST00000505676 KDM2BQ8NHM5 1336 aa22.29■■□□□ 1.16
TRAPPC11-204ENST00000505676 NGDNQ8NEJ9 315 aaKnown RBP22.27■■□□□ 1.16
TRAPPC11-204ENST00000505676 ZRANB1Q9UGI0 708 aa22.27■■□□□ 1.16
TRAPPC11-204ENST00000505676 NPHP4O75161 1426 aaPredicted RBP22.26■■□□□ 1.15
TRAPPC11-204ENST00000505676 RRS1Q15050 365 aaKnown RBP22.24■■□□□ 1.15
TRAPPC11-204ENST00000505676 SBNO1A3KN83 1393 aa22.23■■□□□ 1.15
TRAPPC11-204ENST00000505676 ADGRL3Q9HAR2 1447 aa22.23■■□□□ 1.15
TRAPPC11-204ENST00000505676 ALDH1L2Q3SY69 923 aa22.22■■□□□ 1.15
TRAPPC11-204ENST00000505676 IFT57Q9NWB7 429 aa22.22■■□□□ 1.15
TRAPPC11-204ENST00000505676 ARHGEF10O15013 1369 aa22.22■■□□□ 1.15
TRAPPC11-204ENST00000505676 FLT4P35916 1363 aa22.22■■□□□ 1.15
TRAPPC11-204ENST00000505676 NWD1Q149M9 1564 aa22.22■■□□□ 1.15
TRAPPC11-204ENST00000505676 FBLN1P23142 703 aa22.21■■□□□ 1.15
TRAPPC11-204ENST00000505676 GNAI1P63096 354 aa22.21■■□□□ 1.15
TRAPPC11-204ENST00000505676 ZKSCAN2Q63HK3 967 aa22.21■■□□□ 1.15
TRAPPC11-204ENST00000505676 RGPD1P0DJD0 1748 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms