RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 BLMP54132 1417 aaPredicted RBP8.66□□□□□ -1.02
GYPB-205ENST00000505583 ANKARQ7Z5J8 1434 aa8.66□□□□□ -1.02
GYPB-205ENST00000505583 MINK1Q8N4C8 1332 aaPredicted RBP8.66□□□□□ -1.02
GYPB-205ENST00000505583 HAP1P54257 671 aaPredicted RBP8.66□□□□□ -1.02
GYPB-205ENST00000505583 VPS72Q15906 364 aa8.66□□□□□ -1.02
GYPB-205ENST00000505583 CCDC125Q86Z20 511 aa8.66□□□□□ -1.02
GYPB-205ENST00000505583 POGKQ9P215 609 aa8.66□□□□□ -1.02
GYPB-205ENST00000505583 ZRANB1Q9UGI0 708 aa8.66□□□□□ -1.02
GYPB-205ENST00000505583 KDM2AQ9Y2K7 1162 aa8.66□□□□□ -1.02
GYPB-205ENST00000505583 ARHGEF10O15013 1369 aa8.65□□□□□ -1.02
GYPB-205ENST00000505583 SRCAPQ6ZRS2 3230 aa8.65□□□□□ -1.02
GYPB-205ENST00000505583 ONECUT3O60422 494 aaPredicted RBP8.65□□□□□ -1.02
GYPB-205ENST00000505583 COL14A1Q05707 1796 aaKnown RBP8.65□□□□□ -1.02
GYPB-205ENST00000505583 TULP4Q9NRJ4 1543 aa8.64□□□□□ -1.03
GYPB-205ENST00000505583 DCAF11Q8TEB1 546 aa8.64□□□□□ -1.03
GYPB-205ENST00000505583 ATF5Q9Y2D1 282 aaPredicted RBP8.64□□□□□ -1.03
GYPB-205ENST00000505583 CCDC9Q9Y3X0 531 aaKnown RBP8.64□□□□□ -1.03
GYPB-205ENST00000505583 ACIN1Q9UKV3 1341 aaKnown RBP8.63□□□□□ -1.03
GYPB-205ENST00000505583 WASLO00401 505 aaPredicted RBP8.63□□□□□ -1.03
GYPB-205ENST00000505583 FAM98CQ17RN3 349 aaKnown RBP8.63□□□□□ -1.03
GYPB-205ENST00000505583 FAM182BQ5T319 152 aa8.63□□□□□ -1.03
GYPB-205ENST00000505583 KRT27Q7Z3Y8 459 aa8.63□□□□□ -1.03
GYPB-205ENST00000505583 BTG4Q9NY30 223 aa8.63□□□□□ -1.03
GYPB-205ENST00000505583 ATP7BP35670 1465 aa8.63□□□□□ -1.03
GYPB-205ENST00000505583 ITSN1Q15811 1721 aa8.63□□□□□ -1.03
GYPB-205ENST00000505583 PHRF1Q9P1Y6 1649 aaKnown RBP8.62□□□□□ -1.03
GYPB-205ENST00000505583 AMER1Q5JTC6 1135 aaPredicted RBP8.62□□□□□ -1.03
GYPB-205ENST00000505583 TOPAZ1Q8N9V7 1692 aa8.62□□□□□ -1.03
GYPB-205ENST00000505583 THSD7AQ9UPZ6 1657 aa8.62□□□□□ -1.03
GYPB-205ENST00000505583 TNS1Q9HBL0 1735 aaKnown RBP8.61□□□□□ -1.03
GYPB-205ENST00000505583 GPRASP1Q5JY77 1395 aa8.61□□□□□ -1.03
GYPB-205ENST00000505583 RGPD1P0DJD0 1748 aa8.6□□□□□ -1.03
GYPB-205ENST00000505583 A0A0G2JS52 829 aa8.6□□□□□ -1.03
GYPB-205ENST00000505583 PAK3O75914 559 aaPredicted RBP8.6□□□□□ -1.03
GYPB-205ENST00000505583 MYT1Q01538 1121 aa8.6□□□□□ -1.03
GYPB-205ENST00000505583 NGDNQ8NEJ9 315 aaKnown RBP8.6□□□□□ -1.03
GYPB-205ENST00000505583 NUDT16Q96DE0 195 aaKnown RBP8.6□□□□□ -1.03
GYPB-205ENST00000505583 SPATA31A5Q5VU36 1347 aa8.59□□□□□ -1.03
GYPB-205ENST00000505583 SPATA31A7Q8IWB4 1347 aa8.59□□□□□ -1.03
GYPB-205ENST00000505583 LRP5O75197 1615 aa8.59□□□□□ -1.03
GYPB-205ENST00000505583 PSDA5PKW4 1024 aaPredicted RBP8.59□□□□□ -1.03
GYPB-205ENST00000505583 CHRNA2Q15822 529 aa8.59□□□□□ -1.03
GYPB-205ENST00000505583 NUTM2GQ5VZR2 741 aa8.59□□□□□ -1.03
GYPB-205ENST00000505583 SAMD1Q6SPF0 538 aaPredicted RBP8.59□□□□□ -1.03
GYPB-205ENST00000505583 EIF3AQ14152 1382 aaKnown RBP8.59□□□□□ -1.03
GYPB-205ENST00000505583 KIAA0232Q92628 1395 aa8.59□□□□□ -1.03
GYPB-205ENST00000505583 KIAA1210Q9ULL0 1709 aa8.58□□□□□ -1.04
GYPB-205ENST00000505583 EN1Q05925 392 aaPredicted RBP8.58□□□□□ -1.04
GYPB-205ENST00000505583 SF3B2Q13435 895 aaKnown RBP8.58□□□□□ -1.04
GYPB-205ENST00000505583 CDK19Q9BWU1 502 aa8.58□□□□□ -1.04
GYPB-205ENST00000505583 PRDM11Q9NQV5 511 aa8.58□□□□□ -1.04
GYPB-205ENST00000505583 NRKQ7Z2Y5 1582 aa8.57□□□□□ -1.04
GYPB-205ENST00000505583 SLC24A1O60721 1099 aa8.57□□□□□ -1.04
GYPB-205ENST00000505583 ZC3H6P61129 1189 aaKnown RBP8.57□□□□□ -1.04
GYPB-205ENST00000505583 NBPF1Q3BBV0 1214 aa8.57□□□□□ -1.04
GYPB-205ENST00000505583 POLR3AO14802 1390 aaPredicted RBP8.57□□□□□ -1.04
GYPB-205ENST00000505583 ACEP12821 1306 aa8.56□□□□□ -1.04
GYPB-205ENST00000505583 SPATA31A1Q5TZJ5 1347 aa8.56□□□□□ -1.04
GYPB-205ENST00000505583 LMO7Q8WWI1 1683 aa8.56□□□□□ -1.04
GYPB-205ENST00000505583 CAMTA1Q9Y6Y1 1673 aa8.56□□□□□ -1.04
GYPB-205ENST00000505583 BAG6P46379 1132 aa8.56□□□□□ -1.04
GYPB-205ENST00000505583 NBPF8Q3BBV2 869 aa8.56□□□□□ -1.04
GYPB-205ENST00000505583 STRN4Q9NRL3 753 aa8.56□□□□□ -1.04
GYPB-205ENST00000505583 HRCP23327 699 aa8.55□□□□□ -1.04
GYPB-205ENST00000505583 STAC3Q96MF2 364 aa8.55□□□□□ -1.04
GYPB-205ENST00000505583 USP35Q9P2H5 1018 aa8.55□□□□□ -1.04
GYPB-205ENST00000505583 QRICH2Q9H0J4 1663 aa8.55□□□□□ -1.04
GYPB-205ENST00000505583 PLEKHG3A1L390 1219 aa8.54□□□□□ -1.04
GYPB-205ENST00000505583 EZH2Q15910 746 aaKnown RBP8.54□□□□□ -1.04
GYPB-205ENST00000505583 CCDC61Q9Y6R9 512 aa8.54□□□□□ -1.04
GYPB-205ENST00000505583 DISP2A7MBM2 1401 aa8.54□□□□□ -1.04
GYPB-205ENST00000505583 SSH2Q76I76 1423 aa8.54□□□□□ -1.04
GYPB-205ENST00000505583 RREB1Q92766 1687 aa8.53□□□□□ -1.04
GYPB-205ENST00000505583 TRIM37O94972 964 aa8.53□□□□□ -1.04
GYPB-205ENST00000505583 R3HDM1Q15032 1099 aaKnown RBP8.53□□□□□ -1.04
GYPB-205ENST00000505583 LARP1Q6PKG0 1096 aaKnown RBP8.53□□□□□ -1.04
GYPB-205ENST00000505583 NUP188Q5SRE5 1749 aa8.53□□□□□ -1.04
GYPB-205ENST00000505583 PPIP5K1Q6PFW1 1433 aa8.53□□□□□ -1.04
GYPB-205ENST00000505583 USP19O94966 1318 aa8.53□□□□□ -1.04
GYPB-205ENST00000505583 ABTB2Q8N961 1025 aa8.52□□□□□ -1.05
GYPB-205ENST00000505583 CAMKK2Q96RR4 588 aa8.52□□□□□ -1.05
GYPB-205ENST00000505583 CABP2Q9NPB3 220 aa8.52□□□□□ -1.05
GYPB-205ENST00000505583 RTN4Q9NQC3 1192 aaKnown RBP8.52□□□□□ -1.05
GYPB-205ENST00000505583 CPDO75976 1380 aa8.51□□□□□ -1.05
GYPB-205ENST00000505583 COL18A1P39060 1754 aa8.51□□□□□ -1.05
GYPB-205ENST00000505583 PIK3C2AO00443 1686 aa8.51□□□□□ -1.05
GYPB-205ENST00000505583 EVA1CP58658 441 aa8.51□□□□□ -1.05
GYPB-205ENST00000505583 SRPK2P78362 688 aaKnown RBP8.51□□□□□ -1.05
GYPB-205ENST00000505583 FAM196AQ6ZSG2 479 aa8.51□□□□□ -1.05
GYPB-205ENST00000505583 PEAK1Q9H792 1746 aa8.51□□□□□ -1.05
GYPB-205ENST00000505583 PARP4Q9UKK3 1724 aaKnown RBP8.51□□□□□ -1.05
GYPB-205ENST00000505583 COL5A2P05997 1499 aaPredicted RBP8.51□□□□□ -1.05
GYPB-205ENST00000505583 TRPM1Q7Z4N2 1603 aa8.51□□□□□ -1.05
GYPB-205ENST00000505583 RGPD5Q99666 1765 aa8.5□□□□□ -1.05
GYPB-205ENST00000505583 SBF2Q86WG5 1849 aa8.5□□□□□ -1.05
GYPB-205ENST00000505583 GCP02774 474 aa8.5□□□□□ -1.05
GYPB-205ENST00000505583 BARGINQ6ZT62 677 aa8.5□□□□□ -1.05
GYPB-205ENST00000505583 LRRC37A3O60309 1634 aa8.5□□□□□ -1.05
GYPB-205ENST00000505583 CENPJQ9HC77 1338 aaPredicted RBP8.5□□□□□ -1.05
GYPB-205ENST00000505583 WNK3Q9BYP7 1800 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms