RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 PARD3Q8TEW0 1356 aa9.22□□□□□ -0.93
GYPB-204ENST00000504951 PSME1Q06323 249 aa9.21□□□□□ -0.94
GYPB-204ENST00000504951 KRT28Q7Z3Y7 464 aa9.21□□□□□ -0.94
GYPB-204ENST00000504951 USP32Q8NFA0 1604 aa9.2□□□□□ -0.94
GYPB-204ENST00000504951 YY1P25490 414 aa9.2□□□□□ -0.94
GYPB-204ENST00000504951 NAIPQ13075 1403 aa9.2□□□□□ -0.94
GYPB-204ENST00000504951 PSDA5PKW4 1024 aaPredicted RBP9.19□□□□□ -0.94
GYPB-204ENST00000504951 GALR2O43603 387 aaPredicted RBP9.19□□□□□ -0.94
GYPB-204ENST00000504951 CAMKK2Q96RR4 588 aa9.19□□□□□ -0.94
GYPB-204ENST00000504951 ARHGEF10O15013 1369 aa9.19□□□□□ -0.94
GYPB-204ENST00000504951 CLTCL1P53675 1640 aa9.19□□□□□ -0.94
GYPB-204ENST00000504951 FAM83GA6ND36 823 aa9.18□□□□□ -0.94
GYPB-204ENST00000504951 KIF1BO60333 1816 aa9.18□□□□□ -0.94
GYPB-204ENST00000504951 EN1Q05925 392 aaPredicted RBP9.18□□□□□ -0.94
GYPB-204ENST00000504951 KIF1AQ12756 1690 aa9.18□□□□□ -0.94
GYPB-204ENST00000504951 TNS3Q68CZ2 1445 aa9.18□□□□□ -0.94
GYPB-204ENST00000504951 XPCQ01831 940 aaPredicted RBP9.17□□□□□ -0.94
GYPB-204ENST00000504951 R3HDM1Q15032 1099 aaKnown RBP9.17□□□□□ -0.94
GYPB-204ENST00000504951 RGPD1P0DJD0 1748 aa9.17□□□□□ -0.94
GYPB-204ENST00000504951 FAM196AQ6ZSG2 479 aa9.16□□□□□ -0.94
GYPB-204ENST00000504951 PHF8Q9UPP1 1060 aa9.16□□□□□ -0.94
GYPB-204ENST00000504951 ANKRD30BQ9BXX2 1392 aa9.15□□□□□ -0.94
GYPB-204ENST00000504951 NINLQ9Y2I6 1382 aa9.15□□□□□ -0.94
GYPB-204ENST00000504951 SPATA31A5Q5VU36 1347 aa9.15□□□□□ -0.94
GYPB-204ENST00000504951 SPATA31A7Q8IWB4 1347 aa9.15□□□□□ -0.94
GYPB-204ENST00000504951 WAPLQ7Z5K2 1190 aa9.15□□□□□ -0.94
GYPB-204ENST00000504951 NRXN1Q9ULB1 1477 aa9.15□□□□□ -0.95
GYPB-204ENST00000504951 C11orf95C9JLR9 678 aaPredicted RBP9.14□□□□□ -0.95
GYPB-204ENST00000504951 EZH2Q15910 746 aaKnown RBP9.14□□□□□ -0.95
GYPB-204ENST00000504951 FAM98CQ17RN3 349 aaKnown RBP9.14□□□□□ -0.95
GYPB-204ENST00000504951 CCDC9Q9Y3X0 531 aaKnown RBP9.14□□□□□ -0.95
GYPB-204ENST00000504951 FMN2Q9NZ56 1722 aa9.14□□□□□ -0.95
GYPB-204ENST00000504951 RRBP1Q9P2E9 1410 aaKnown RBP9.14□□□□□ -0.95
GYPB-204ENST00000504951 PLCH1Q4KWH8 1693 aa9.13□□□□□ -0.95
GYPB-204ENST00000504951 MNX1P50219 401 aaPredicted RBP9.13□□□□□ -0.95
GYPB-204ENST00000504951 HAP1P54257 671 aaPredicted RBP9.13□□□□□ -0.95
GYPB-204ENST00000504951 PHF12Q96QT6 1004 aa9.13□□□□□ -0.95
GYPB-204ENST00000504951 BTG4Q9NY30 223 aa9.13□□□□□ -0.95
GYPB-204ENST00000504951 PPLO60437 1756 aa9.13□□□□□ -0.95
GYPB-204ENST00000504951 KNDC1Q76NI1 1749 aa9.12□□□□□ -0.95
GYPB-204ENST00000504951 NRAPQ86VF7 1730 aa9.12□□□□□ -0.95
GYPB-204ENST00000504951 NBPF8Q3BBV2 869 aa9.12□□□□□ -0.95
GYPB-204ENST00000504951 NBPF14Q5TI25 921 aa9.12□□□□□ -0.95
GYPB-204ENST00000504951 CABLES1Q8TDN4 633 aa9.12□□□□□ -0.95
GYPB-204ENST00000504951 SPON1Q9HCB6 807 aa9.12□□□□□ -0.95
GYPB-204ENST00000504951 THSD7AQ9UPZ6 1657 aa9.12□□□□□ -0.95
GYPB-204ENST00000504951 TNS1Q9HBL0 1735 aaKnown RBP9.11□□□□□ -0.95
GYPB-204ENST00000504951 ADGRF5Q8IZF2 1346 aa9.11□□□□□ -0.95
GYPB-204ENST00000504951 KCNQ2O43526 872 aa9.11□□□□□ -0.95
GYPB-204ENST00000504951 BARGINQ6ZT62 677 aa9.11□□□□□ -0.95
GYPB-204ENST00000504951 ANKARQ7Z5J8 1434 aa9.11□□□□□ -0.95
GYPB-204ENST00000504951 YTHDC2Q9H6S0 1430 aaKnown RBP9.11□□□□□ -0.95
GYPB-204ENST00000504951 COL14A1Q05707 1796 aaKnown RBP9.11□□□□□ -0.95
GYPB-204ENST00000504951 ADGRB2O60241 1585 aa9.11□□□□□ -0.95
GYPB-204ENST00000504951 PLEKHH1Q9ULM0 1364 aa9.11□□□□□ -0.95
GYPB-204ENST00000504951 NUTM2FA1L443 756 aa9.1□□□□□ -0.95
GYPB-204ENST00000504951 IFFO2Q5TF58 517 aa9.1□□□□□ -0.95
GYPB-204ENST00000504951 C14orf93Q9H972 538 aaKnown RBP9.1□□□□□ -0.95
GYPB-204ENST00000504951 ABCA3Q99758 1704 aa9.1□□□□□ -0.95
GYPB-204ENST00000504951 SPATA31A1Q5TZJ5 1347 aa9.09□□□□□ -0.95
GYPB-204ENST00000504951 PIK3C2GO75747 1445 aa9.09□□□□□ -0.95
GYPB-204ENST00000504951 SPATA31E1Q6ZUB1 1445 aa9.09□□□□□ -0.95
GYPB-204ENST00000504951 APBA3O96018 575 aa9.09□□□□□ -0.95
GYPB-204ENST00000504951 PLSCR1O15162 318 aa9.08□□□□□ -0.96
GYPB-204ENST00000504951 TRIM37O94972 964 aa9.08□□□□□ -0.96
GYPB-204ENST00000504951 PROM2Q8N271 834 aa9.08□□□□□ -0.96
GYPB-204ENST00000504951 STK26Q9P289 416 aa9.08□□□□□ -0.96
GYPB-204ENST00000504951 RREB1Q92766 1687 aa9.07□□□□□ -0.96
GYPB-204ENST00000504951 A0A0G2JS52 829 aa9.07□□□□□ -0.96
GYPB-204ENST00000504951 PLEKHG5O94827 1062 aa9.07□□□□□ -0.96
GYPB-204ENST00000504951 MYT1Q01538 1121 aa9.07□□□□□ -0.96
GYPB-204ENST00000504951 TMEM132EQ6IEE7 984 aa9.07□□□□□ -0.96
GYPB-204ENST00000504951 ZNF784Q8NCA9 323 aaPredicted RBP9.07□□□□□ -0.96
GYPB-204ENST00000504951 THRAP3Q9Y2W1 955 aaKnown RBP9.07□□□□□ -0.96
GYPB-204ENST00000504951 DHX57Q6P158 1386 aaKnown RBP9.07□□□□□ -0.96
GYPB-204ENST00000504951 FAM182BQ5T319 152 aa9.06□□□□□ -0.96
GYPB-204ENST00000504951 EIF3AQ14152 1382 aaKnown RBP9.06□□□□□ -0.96
GYPB-204ENST00000504951 GPRASP1Q5JY77 1395 aa9.06□□□□□ -0.96
GYPB-204ENST00000504951 ALS2Q96Q42 1657 aa9.06□□□□□ -0.96
GYPB-204ENST00000504951 ACIN1Q9UKV3 1341 aaKnown RBP9.05□□□□□ -0.96
GYPB-204ENST00000504951 DLC1Q96QB1 1528 aa9.05□□□□□ -0.96
GYPB-204ENST00000504951 TRPM3Q9HCF6 1732 aaPredicted RBP9.05□□□□□ -0.96
GYPB-204ENST00000504951 LMOD2Q6P5Q4 547 aa9.05□□□□□ -0.96
GYPB-204ENST00000504951 PPARGC1BQ86YN6 1023 aaKnown RBP9.05□□□□□ -0.96
GYPB-204ENST00000504951 PRDM11Q9NQV5 511 aa9.05□□□□□ -0.96
GYPB-204ENST00000504951 PPP1R1BQ9UD71 204 aaPredicted RBP9.05□□□□□ -0.96
GYPB-204ENST00000504951 RGPD8O14715 1765 aaPredicted RBP9.04□□□□□ -0.96
GYPB-204ENST00000504951 ITGAEP38570 1179 aa9.04□□□□□ -0.96
GYPB-204ENST00000504951 C1QTNF8P60827 252 aa9.04□□□□□ -0.96
GYPB-204ENST00000504951 PDE3BQ13370 1112 aa9.04□□□□□ -0.96
GYPB-204ENST00000504951 NUP188Q5SRE5 1749 aa9.03□□□□□ -0.96
GYPB-204ENST00000504951 IFT172Q9UG01 1749 aa9.03□□□□□ -0.96
GYPB-204ENST00000504951 ASTLQ6HA08 431 aaPredicted RBP9.03□□□□□ -0.96
GYPB-204ENST00000504951 PMFBP1Q8TBY8 1022 aa9.03□□□□□ -0.96
GYPB-204ENST00000504951 SLC39A7Q92504 469 aa9.03□□□□□ -0.96
GYPB-204ENST00000504951 MS4A3Q96HJ5 214 aa9.03□□□□□ -0.96
GYPB-204ENST00000504951 BCL9O00512 1426 aa9.03□□□□□ -0.96
GYPB-204ENST00000504951 CRYBG1Q9Y4K1 1723 aa9.02□□□□□ -0.96
GYPB-204ENST00000504951 RGPD3A6NKT7 1758 aaPredicted RBP9.02□□□□□ -0.97
GYPB-204ENST00000504951 RGPD4Q7Z3J3 1758 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms