RNA–Protein interactions for RNA: ENST00000504949.1

RHOBTB3-205, Transcript of Rho related BTB domain containing 3, humanhuman

TSL 2

Gene RHOBTB3, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOBTB3-205ENST00000504949 KNSTRNQ9Y448 316 aa16.32■□□□□ 0.2
RHOBTB3-205ENST00000504949 PXDNQ92626 1479 aa16.32■□□□□ 0.2
RHOBTB3-205ENST00000504949 SOS2Q07890 1332 aaPredicted RBP16.32■□□□□ 0.2
RHOBTB3-205ENST00000504949 NHSL1Q5SYE7 1610 aa16.31■□□□□ 0.2
RHOBTB3-205ENST00000504949 NPC1L1Q9UHC9 1359 aa16.3■□□□□ 0.2
RHOBTB3-205ENST00000504949 FYB1O15117 783 aa16.3■□□□□ 0.2
RHOBTB3-205ENST00000504949 TRPM3Q9HCF6 1732 aaPredicted RBP16.3■□□□□ 0.2
RHOBTB3-205ENST00000504949 PIP4K2BP78356 416 aa16.29■□□□□ 0.2
RHOBTB3-205ENST00000504949 XPCQ01831 940 aaPredicted RBP16.29■□□□□ 0.2
RHOBTB3-205ENST00000504949 CGNL1Q0VF96 1302 aa16.29■□□□□ 0.2
RHOBTB3-205ENST00000504949 TTC21AQ8NDW8 1320 aa16.29■□□□□ 0.2
RHOBTB3-205ENST00000504949 AHDC1Q5TGY3 1603 aaPredicted RBP16.29■□□□□ 0.2
RHOBTB3-205ENST00000504949 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.29■□□□□ 0.21e-6■■■■□ 22.6
RHOBTB3-205ENST00000504949 SBNO1A3KN83 1393 aa16.28■□□□□ 0.2
RHOBTB3-205ENST00000504949 NME9Q86XW9 330 aa16.26■□□□□ 0.19
RHOBTB3-205ENST00000504949 NSD2O96028 1365 aa16.26■□□□□ 0.19
RHOBTB3-205ENST00000504949 USP31Q70CQ4 1352 aa16.26■□□□□ 0.19
RHOBTB3-205ENST00000504949 PIK3C2AO00443 1686 aa16.25■□□□□ 0.19
RHOBTB3-205ENST00000504949 SPATA31A3Q5VYP0 1347 aa16.25■□□□□ 0.19
RHOBTB3-205ENST00000504949 ALS2Q96Q42 1657 aa16.25■□□□□ 0.19
RHOBTB3-205ENST00000504949 PAK3O75914 559 aaPredicted RBP16.24■□□□□ 0.19
RHOBTB3-205ENST00000504949 GGNBP2Q9H3C7 697 aa16.24■□□□□ 0.19
RHOBTB3-205ENST00000504949 ZRANB1Q9UGI0 708 aa16.24■□□□□ 0.19
RHOBTB3-205ENST00000504949 KIF20BQ96Q89 1820 aa16.24■□□□□ 0.19
RHOBTB3-205ENST00000504949 CC2D1BQ5T0F9 858 aaKnown RBP16.24■□□□□ 0.19
RHOBTB3-205ENST00000504949 ABTB2Q8N961 1025 aa16.24■□□□□ 0.19
RHOBTB3-205ENST00000504949 SCAF1Q9H7N4 1312 aaKnown RBP16.24■□□□□ 0.19
RHOBTB3-205ENST00000504949 OVOS2A0A0J9YW53 1432 aa16.23■□□□□ 0.19
RHOBTB3-205ENST00000504949 TNS3Q68CZ2 1445 aa16.23■□□□□ 0.19
RHOBTB3-205ENST00000504949 OVOS2Q6IE36 1432 aa16.23■□□□□ 0.19
RHOBTB3-205ENST00000504949 USP54Q70EL1 1684 aa16.23■□□□□ 0.19
RHOBTB3-205ENST00000504949 PRKRIP1Q9H875 184 aaPredicted RBP16.23■□□□□ 0.19
RHOBTB3-205ENST00000504949 COL16A1Q07092 1604 aaPredicted RBP16.22■□□□□ 0.19
RHOBTB3-205ENST00000504949 PARD3Q8TEW0 1356 aa16.22■□□□□ 0.19
RHOBTB3-205ENST00000504949 MARF1Q9Y4F3 1742 aaKnown RBP16.22■□□□□ 0.19
RHOBTB3-205ENST00000504949 LRRC59Q96AG4 307 aaKnown RBP16.21■□□□□ 0.19
RHOBTB3-205ENST00000504949 ANKRD26Q9UPS8 1709 aa16.21■□□□□ 0.19
RHOBTB3-205ENST00000504949 PHLPP1O60346 1717 aa16.2■□□□□ 0.18
RHOBTB3-205ENST00000504949 NLRP6P59044 892 aa16.2■□□□□ 0.18
RHOBTB3-205ENST00000504949 ARHGEF10O15013 1369 aa16.2■□□□□ 0.18
RHOBTB3-205ENST00000504949 RALBP1Q15311 655 aa16.19■□□□□ 0.18
RHOBTB3-205ENST00000504949 NUTM2GQ5VZR2 741 aa16.19■□□□□ 0.18
RHOBTB3-205ENST00000504949 COG3Q96JB2 828 aa16.19■□□□□ 0.18
RHOBTB3-205ENST00000504949 USP19O94966 1318 aa16.19■□□□□ 0.18
RHOBTB3-205ENST00000504949 CNGB1Q14028 1251 aaPredicted RBP16.19■□□□□ 0.18
RHOBTB3-205ENST00000504949 MORC1Q86VD1 984 aa16.19■□□□□ 0.18
RHOBTB3-205ENST00000504949 NLRP13Q86W25 1043 aa16.19■□□□□ 0.18
RHOBTB3-205ENST00000504949 ANP32CO43423 234 aa16.18■□□□□ 0.18
RHOBTB3-205ENST00000504949 LMOD2Q6P5Q4 547 aa16.17■□□□□ 0.18
RHOBTB3-205ENST00000504949 MED1Q15648 1581 aaPredicted RBP16.17■□□□□ 0.18
RHOBTB3-205ENST00000504949 MIER1Q8N108 512 aa16.16■□□□□ 0.18
RHOBTB3-205ENST00000504949 SLIT3O75094 1523 aa16.16■□□□□ 0.18
RHOBTB3-205ENST00000504949 PNPLA6Q8IY17 1366 aa16.16■□□□□ 0.18
RHOBTB3-205ENST00000504949 CRYBG1Q9Y4K1 1723 aa16.15■□□□□ 0.18
RHOBTB3-205ENST00000504949 HSPA1LP34931 641 aa16.15■□□□□ 0.18
RHOBTB3-205ENST00000504949 AATKQ6ZMQ8 1374 aa16.15■□□□□ 0.18
RHOBTB3-205ENST00000504949 FBLN1P23142 703 aa16.14■□□□□ 0.18
RHOBTB3-205ENST00000504949 COL22A1Q8NFW1 1626 aaPredicted RBP16.14■□□□□ 0.17
RHOBTB3-205ENST00000504949 GCP02774 474 aa16.14■□□□□ 0.17
RHOBTB3-205ENST00000504949 PPP2R1AP30153 589 aa16.14■□□□□ 0.17
RHOBTB3-205ENST00000504949 TNNT2P45379 298 aaPredicted RBP16.13■□□□□ 0.17
RHOBTB3-205ENST00000504949 KCNH5Q8NCM2 988 aa16.13■□□□□ 0.17
RHOBTB3-205ENST00000504949 CABLES1Q8TDN4 633 aa16.13■□□□□ 0.17
RHOBTB3-205ENST00000504949 FBXO41Q8TF61 875 aa16.13■□□□□ 0.17
RHOBTB3-205ENST00000504949 NFAT5O94916 1531 aa16.13■□□□□ 0.17
RHOBTB3-205ENST00000504949 MYBBP1AQ9BQG0 1328 aaKnown RBP16.12■□□□□ 0.17
RHOBTB3-205ENST00000504949 PHRF1Q9P1Y6 1649 aaKnown RBP16.11■□□□□ 0.17
RHOBTB3-205ENST00000504949 POLKQ9UBT6 870 aa16.11■□□□□ 0.17
RHOBTB3-205ENST00000504949 JCADQ9P266 1359 aa16.1■□□□□ 0.17
RHOBTB3-205ENST00000504949 SHPRHQ149N8 1683 aa16.1■□□□□ 0.17
RHOBTB3-205ENST00000504949 SMG6Q86US8 1419 aaKnown RBP16.1■□□□□ 0.17
RHOBTB3-205ENST00000504949 MAP2P11137 1827 aaKnown RBP16.1■□□□□ 0.17
RHOBTB3-205ENST00000504949 ARHGEF25Q86VW2 580 aa16.09■□□□□ 0.17
RHOBTB3-205ENST00000504949 ABCA3Q99758 1704 aa16.09■□□□□ 0.17
RHOBTB3-205ENST00000504949 SOX12O15370 315 aa16.09■□□□□ 0.17
RHOBTB3-205ENST00000504949 MTHFSP49914 203 aa16.09■□□□□ 0.17
RHOBTB3-205ENST00000504949 RRS1Q15050 365 aaKnown RBP16.09■□□□□ 0.17
RHOBTB3-205ENST00000504949 MAP3K19Q56UN5 1328 aa16.08■□□□□ 0.17
RHOBTB3-205ENST00000504949 PLEKHG5O94827 1062 aa16.08■□□□□ 0.16
RHOBTB3-205ENST00000504949 EMILIN1Q9Y6C2 1016 aa16.08■□□□□ 0.16
RHOBTB3-205ENST00000504949 CPDO75976 1380 aa16.07■□□□□ 0.16
RHOBTB3-205ENST00000504949 CCER2I3L3R5 266 aa16.07■□□□□ 0.16
RHOBTB3-205ENST00000504949 KIF24Q5T7B8 1368 aa16.06■□□□□ 0.16
RHOBTB3-205ENST00000504949 CCDC184Q52MB2 194 aa16.06■□□□□ 0.16
RHOBTB3-205ENST00000504949 INSRP06213 1382 aa16.06■□□□□ 0.16
RHOBTB3-205ENST00000504949 PEAK1Q9H792 1746 aa16.05■□□□□ 0.16
RHOBTB3-205ENST00000504949 ZC3H6P61129 1189 aaKnown RBP16.05■□□□□ 0.16
RHOBTB3-205ENST00000504949 LTN1O94822 1766 aa16.04■□□□□ 0.16
RHOBTB3-205ENST00000504949 KIAA0232Q92628 1395 aa16.04■□□□□ 0.16
RHOBTB3-205ENST00000504949 SPATA31A6Q5VVP1 1343 aa16.03■□□□□ 0.16
RHOBTB3-205ENST00000504949 CDK12Q9NYV4 1490 aaPredicted RBP16.03■□□□□ 0.16
RHOBTB3-205ENST00000504949 COL18A1P39060 1754 aa16.03■□□□□ 0.16
RHOBTB3-205ENST00000504949 HOXC9P31274 260 aa16.03■□□□□ 0.16
RHOBTB3-205ENST00000504949 IP6K1Q92551 441 aa16.03■□□□□ 0.16
RHOBTB3-205ENST00000504949 RTL1A6NKG5 1358 aa16.02■□□□□ 0.16
RHOBTB3-205ENST00000504949 FLT4P35916 1363 aa16.02■□□□□ 0.16
RHOBTB3-205ENST00000504949 COL3A1P02461 1466 aaPredicted RBP16.02■□□□□ 0.16
RHOBTB3-205ENST00000504949 HAP1P54257 671 aaPredicted RBP16.02■□□□□ 0.15
RHOBTB3-205ENST00000504949 HSP90AB2PQ58FF8 381 aa16.02■□□□□ 0.15
RHOBTB3-205ENST00000504949 FAM83GA6ND36 823 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms