RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 NRAPQ86VF7 1730 aa32.72■■■□□ 2.83
CDC42SE2-207ENST00000504701 BRWD3Q6RI45 1802 aa32.71■■■□□ 2.83
CDC42SE2-207ENST00000504701 ATAD2Q6PL18 1390 aa32.7■■■□□ 2.83
CDC42SE2-207ENST00000504701 EP400Q96L91 3159 aa32.7■■■□□ 2.83
CDC42SE2-207ENST00000504701 CENPJQ9HC77 1338 aaPredicted RBP32.69■■■□□ 2.82
CDC42SE2-207ENST00000504701 ACEP12821 1306 aa32.68■■■□□ 2.82
CDC42SE2-207ENST00000504701 POLR3AO14802 1390 aaPredicted RBP32.66■■■□□ 2.82
CDC42SE2-207ENST00000504701 PHRF1Q9P1Y6 1649 aaKnown RBP32.66■■■□□ 2.82
CDC42SE2-207ENST00000504701 VPS72Q15906 364 aa32.65■■■□□ 2.82
CDC42SE2-207ENST00000504701 NUTM2GQ5VZR2 741 aa32.65■■■□□ 2.82
CDC42SE2-207ENST00000504701 CABP2Q9NPB3 220 aa32.65■■■□□ 2.82
CDC42SE2-207ENST00000504701 COL14A1Q05707 1796 aaKnown RBP32.65■■■□□ 2.82
CDC42SE2-207ENST00000504701 CCDC61Q9Y6R9 512 aa32.64■■■□□ 2.82
CDC42SE2-207ENST00000504701 SRPK2P78362 688 aaKnown RBP32.62■■■□□ 2.81
CDC42SE2-207ENST00000504701 NBPF8Q3BBV2 869 aa32.62■■■□□ 2.81
CDC42SE2-207ENST00000504701 CCDC9Q9Y3X0 531 aaKnown RBP32.62■■■□□ 2.81
CDC42SE2-207ENST00000504701 BTG4Q9NY30 223 aa32.61■■■□□ 2.81
CDC42SE2-207ENST00000504701 PLEKHG3A1L390 1219 aa32.6■■■□□ 2.81
CDC42SE2-207ENST00000504701 PPIP5K1Q6PFW1 1433 aa32.6■■■□□ 2.81
CDC42SE2-207ENST00000504701 SEPT12Q8IYM1 358 aa32.58■■■□□ 2.81
CDC42SE2-207ENST00000504701 ROCK2O75116 1388 aaKnown RBP32.57■■■□□ 2.8
CDC42SE2-207ENST00000504701 KIAA0232Q92628 1395 aa32.55■■■□□ 2.8
CDC42SE2-207ENST00000504701 CHRNA2Q15822 529 aa32.54■■■□□ 2.8
CDC42SE2-207ENST00000504701 PRDM11Q9NQV5 511 aa32.53■■■□□ 2.8
CDC42SE2-207ENST00000504701 NRKQ7Z2Y5 1582 aa32.53■■■□□ 2.8
CDC42SE2-207ENST00000504701 ZC3H6P61129 1189 aaKnown RBP32.51■■■□□ 2.79
CDC42SE2-207ENST00000504701 FAM98CQ17RN3 349 aaKnown RBP32.5■■■□□ 2.79
CDC42SE2-207ENST00000504701 ONECUT3O60422 494 aaPredicted RBP32.49■■■□□ 2.79
CDC42SE2-207ENST00000504701 CABP1Q9NZU7 370 aa32.49■■■□□ 2.79
CDC42SE2-207ENST00000504701 ABTB2Q8N961 1025 aa32.48■■■□□ 2.79
CDC42SE2-207ENST00000504701 A0A0G2JS52 829 aa32.45■■■□□ 2.79
CDC42SE2-207ENST00000504701 MYT1Q01538 1121 aa32.45■■■□□ 2.79
CDC42SE2-207ENST00000504701 SPATA31A5Q5VU36 1347 aa32.45■■■□□ 2.78
CDC42SE2-207ENST00000504701 SPATA31A7Q8IWB4 1347 aa32.45■■■□□ 2.78
CDC42SE2-207ENST00000504701 USP6P35125 1406 aa32.43■■■□□ 2.78
CDC42SE2-207ENST00000504701 USP19O94966 1318 aa32.43■■■□□ 2.78
CDC42SE2-207ENST00000504701 EVC2Q86UK5 1308 aa32.43■■■□□ 2.78
CDC42SE2-207ENST00000504701 KRT27Q7Z3Y8 459 aa32.42■■■□□ 2.78
CDC42SE2-207ENST00000504701 THSD7AQ9UPZ6 1657 aa32.41■■■□□ 2.78
CDC42SE2-207ENST00000504701 STRN4Q9NRL3 753 aa32.41■■■□□ 2.78
CDC42SE2-207ENST00000504701 LMO7Q8WWI1 1683 aa32.4■■■□□ 2.78
CDC42SE2-207ENST00000504701 PIK3C2AO00443 1686 aa32.4■■■□□ 2.78
CDC42SE2-207ENST00000504701 CAMTA1Q9Y6Y1 1673 aa32.4■■■□□ 2.78
CDC42SE2-207ENST00000504701 TRIM26Q12899 539 aaPredicted RBP32.39■■■□□ 2.78
CDC42SE2-207ENST00000504701 BLMP54132 1417 aaPredicted RBP32.39■■■□□ 2.78
CDC42SE2-207ENST00000504701 AKAP12Q02952 1782 aa32.38■■■□□ 2.77
CDC42SE2-207ENST00000504701 FAM182BQ5T319 152 aa32.38■■■□□ 2.77
CDC42SE2-207ENST00000504701 SSH2Q76I76 1423 aa32.37■■■□□ 2.77
CDC42SE2-207ENST00000504701 TONSLQ96HA7 1378 aa32.37■■■□□ 2.77
CDC42SE2-207ENST00000504701 DEFB132Q7Z7B7 95 aa32.37■■■□□ 2.77
CDC42SE2-207ENST00000504701 CCDC125Q86Z20 511 aa32.36■■■□□ 2.77
CDC42SE2-207ENST00000504701 SPATA31A1Q5TZJ5 1347 aa32.35■■■□□ 2.77
CDC42SE2-207ENST00000504701 GCP02774 474 aa32.34■■■□□ 2.77
CDC42SE2-207ENST00000504701 NLRP13Q86W25 1043 aa32.34■■■□□ 2.77
CDC42SE2-207ENST00000504701 CARD11Q9BXL7 1154 aa32.34■■■□□ 2.77
CDC42SE2-207ENST00000504701 CPDO75976 1380 aa32.32■■■□□ 2.77
CDC42SE2-207ENST00000504701 SLIT3O75094 1523 aa32.31■■■□□ 2.76
CDC42SE2-207ENST00000504701 USP35Q9P2H5 1018 aa32.31■■■□□ 2.76
CDC42SE2-207ENST00000504701 NLRP6P59044 892 aa32.3■■■□□ 2.76
CDC42SE2-207ENST00000504701 LARP1Q6PKG0 1096 aaKnown RBP32.3■■■□□ 2.76
CDC42SE2-207ENST00000504701 BRD4O60885 1362 aaPredicted RBP32.3■■■□□ 2.76
CDC42SE2-207ENST00000504701 ZBTB7CA1YPR0 619 aa32.29■■■□□ 2.76
CDC42SE2-207ENST00000504701 EVA1CP58658 441 aa32.26■■■□□ 2.75
CDC42SE2-207ENST00000504701 MON2Q7Z3U7 1717 aa32.26■■■□□ 2.75
CDC42SE2-207ENST00000504701 CPSF1Q10570 1443 aaKnown RBP32.26■■■□□ 2.75
CDC42SE2-207ENST00000504701 TTC21BQ7Z4L5 1316 aa32.26■■■□□ 2.75
CDC42SE2-207ENST00000504701 SBNO2Q9Y2G9 1366 aa32.25■■■□□ 2.75
CDC42SE2-207ENST00000504701 COL5A2P05997 1499 aaPredicted RBP32.24■■■□□ 2.75
CDC42SE2-207ENST00000504701 COL18A1P39060 1754 aa32.24■■■□□ 2.75
CDC42SE2-207ENST00000504701 SF3B2Q13435 895 aaKnown RBP32.22■■■□□ 2.75
CDC42SE2-207ENST00000504701 ZRANB1Q9UGI0 708 aa32.22■■■□□ 2.75
CDC42SE2-207ENST00000504701 CD163L1Q9NR16 1453 aa32.21■■■□□ 2.75
CDC42SE2-207ENST00000504701 KTN1Q86UP2 1357 aaKnown RBP32.2■■■□□ 2.75
CDC42SE2-207ENST00000504701 RGPD1P0DJD0 1748 aa32.2■■■□□ 2.75
CDC42SE2-207ENST00000504701 TNS1Q9HBL0 1735 aaKnown RBP32.2■■■□□ 2.75
CDC42SE2-207ENST00000504701 RGPD5Q99666 1765 aa32.19■■■□□ 2.74
CDC42SE2-207ENST00000504701 SOX12O15370 315 aa32.19■■■□□ 2.74
CDC42SE2-207ENST00000504701 SRCAPQ6ZRS2 3230 aa32.19■■■□□ 2.74
CDC42SE2-207ENST00000504701 ZNF692Q9BU19 519 aaPredicted RBP32.18■■■□□ 2.74
CDC42SE2-207ENST00000504701 BARGINQ6ZT62 677 aa32.16■■■□□ 2.74
CDC42SE2-207ENST00000504701 TCP11L2Q8N4U5 519 aa32.15■■■□□ 2.74
CDC42SE2-207ENST00000504701 AXIN2Q9Y2T1 843 aa32.15■■■□□ 2.74
CDC42SE2-207ENST00000504701 AATKQ6ZMQ8 1374 aa32.15■■■□□ 2.74
CDC42SE2-207ENST00000504701 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.14■■■□□ 2.74
CDC42SE2-207ENST00000504701 SLC12A5Q9H2X9 1139 aa32.14■■■□□ 2.74
CDC42SE2-207ENST00000504701 NFAT5O94916 1531 aa32.14■■■□□ 2.74
CDC42SE2-207ENST00000504701 TTC21AQ8NDW8 1320 aa32.13■■■□□ 2.73
CDC42SE2-207ENST00000504701 TMC1Q8TDI8 760 aa32.13■■■□□ 2.73
CDC42SE2-207ENST00000504701 EN1Q05925 392 aaPredicted RBP32.12■■■□□ 2.73
CDC42SE2-207ENST00000504701 PARP4Q9UKK3 1724 aaKnown RBP32.12■■■□□ 2.73
CDC42SE2-207ENST00000504701 CRB1P82279 1406 aa32.11■■■□□ 2.73
CDC42SE2-207ENST00000504701 BAG6P46379 1132 aa32.1■■■□□ 2.73
CDC42SE2-207ENST00000504701 ARHGEF25Q86VW2 580 aa32.1■■■□□ 2.73
CDC42SE2-207ENST00000504701 TESK2Q96S53 571 aa32.1■■■□□ 2.73
CDC42SE2-207ENST00000504701 ST20-MTHFSA0A0A6YYL1 179 aa32.09■■■□□ 2.73
CDC42SE2-207ENST00000504701 NME9Q86XW9 330 aa32.09■■■□□ 2.73
CDC42SE2-207ENST00000504701 TRIM37O94972 964 aa32.08■■■□□ 2.73
CDC42SE2-207ENST00000504701 USP54Q70EL1 1684 aa32.08■■■□□ 2.73
CDC42SE2-207ENST00000504701 WNK3Q9BYP7 1800 aa32.07■■■□□ 2.73
CDC42SE2-207ENST00000504701 LRRC37A3O60309 1634 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms