RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 AK7Q96M32 723 aa9.47□□□□□ -0.89
GYPB-203ENST00000503255 MAP10Q9P2G4 905 aa9.47□□□□□ -0.89
GYPB-203ENST00000503255 SPDYE5A6NIY4 337 aa9.46□□□□□ -0.9
GYPB-203ENST00000503255 SPTLC1O15269 473 aa9.46□□□□□ -0.9
GYPB-203ENST00000503255 PER1O15534 1290 aaPredicted RBP9.46□□□□□ -0.9
GYPB-203ENST00000503255 DESI1Q6ICB0 168 aa9.46□□□□□ -0.9
GYPB-203ENST00000503255 FOXJ1Q92949 421 aa9.46□□□□□ -0.9
GYPB-203ENST00000503255 KIFC2Q96AC6 838 aa9.45□□□□□ -0.9
GYPB-203ENST00000503255 VEGFBP49765 207 aa9.44□□□□□ -0.9
GYPB-203ENST00000503255 TSC1Q92574 1164 aa9.44□□□□□ -0.9
GYPB-203ENST00000503255 LIMD1Q9UGP4 676 aa9.44□□□□□ -0.9
GYPB-203ENST00000503255 VARSP26640 1264 aaKnown RBP9.43□□□□□ -0.9
GYPB-203ENST00000503255 NNTQ13423 1086 aa9.43□□□□□ -0.9
GYPB-203ENST00000503255 ZBTB3Q9H5J0 574 aa9.43□□□□□ -0.9
GYPB-203ENST00000503255 GJA5P36382 358 aa9.42□□□□□ -0.9
GYPB-203ENST00000503255 PDE4DQ08499 809 aa9.42□□□□□ -0.9
GYPB-203ENST00000503255 ARID5BQ14865 1188 aa9.42□□□□□ -0.9
GYPB-203ENST00000503255 QPCTQ16769 361 aa9.42□□□□□ -0.9
GYPB-203ENST00000503255 ZFP42Q96MM3 310 aa9.42□□□□□ -0.9
GYPB-203ENST00000503255 SLC24A3Q9HC58 644 aa9.42□□□□□ -0.9
GYPB-203ENST00000503255 DIXDC1Q155Q3 683 aa9.41□□□□□ -0.9
GYPB-203ENST00000503255 NUTM2BA6NNL0 878 aaPredicted RBP9.4□□□□□ -0.9
GYPB-203ENST00000503255 NUTM2EB1AL46 878 aaPredicted RBP9.4□□□□□ -0.9
GYPB-203ENST00000503255 WIPF1O43516 503 aa9.4□□□□□ -0.9
GYPB-203ENST00000503255 F12P00748 615 aaPredicted RBP9.4□□□□□ -0.9
GYPB-203ENST00000503255 C4orf48Q5BLP8 95 aa9.4□□□□□ -0.9
GYPB-203ENST00000503255 NUTM2DQ5VT03 806 aaPredicted RBP9.4□□□□□ -0.9
GYPB-203ENST00000503255 MYSM1Q5VVJ2 828 aa9.4□□□□□ -0.9
GYPB-203ENST00000503255 NUTM2AQ8IVF1 878 aaPredicted RBP9.4□□□□□ -0.9
GYPB-203ENST00000503255 PLEKHG3A1L390 1219 aa9.39□□□□□ -0.91
GYPB-203ENST00000503255 SOBPA7XYQ1 873 aa9.39□□□□□ -0.91
GYPB-203ENST00000503255 WDR4P57081 412 aaKnown RBP9.39□□□□□ -0.91
GYPB-203ENST00000503255 NXF1Q9UBU9 619 aaKnown RBP9.39□□□□□ -0.91
GYPB-203ENST00000503255 AGERQ15109 404 aa9.38□□□□□ -0.91
GYPB-203ENST00000503255 RTL5Q5HYW3 569 aaPredicted RBP9.38□□□□□ -0.91
GYPB-203ENST00000503255 PRPF38BQ5VTL8 546 aaKnown RBP9.38□□□□□ -0.91
GYPB-203ENST00000503255 PURBQ96QR8 312 aaKnown RBP9.38□□□□□ -0.91
GYPB-203ENST00000503255 TIMP2P16035 220 aa9.37□□□□□ -0.91
GYPB-203ENST00000503255 FAM174AQ8TBP5 190 aa9.37□□□□□ -0.91
GYPB-203ENST00000503255 KLF16Q9BXK1 252 aaPredicted RBP9.37□□□□□ -0.91
GYPB-203ENST00000503255 NR3C2P08235 984 aa9.36□□□□□ -0.91
GYPB-203ENST00000503255 MPNDQ8N594 471 aa9.36□□□□□ -0.91
GYPB-203ENST00000503255 ZFAND3Q9H8U3 227 aa9.36□□□□□ -0.91
GYPB-203ENST00000503255 POLR3EQ9NVU0 708 aa9.36□□□□□ -0.91
GYPB-203ENST00000503255 LILRB3O75022 631 aa9.35□□□□□ -0.91
GYPB-203ENST00000503255 GMPRP36959 345 aa9.35□□□□□ -0.91
GYPB-203ENST00000503255 MRPL14Q6P1L8 145 aaKnown RBP9.35□□□□□ -0.91
GYPB-203ENST00000503255 ADH1CP00326 375 aa9.34□□□□□ -0.91
GYPB-203ENST00000503255 GRM5P41594 1212 aa9.34□□□□□ -0.91
GYPB-203ENST00000503255 INSM1Q01101 510 aaPredicted RBP9.34□□□□□ -0.91
GYPB-203ENST00000503255 CDK15Q96Q40 435 aa9.34□□□□□ -0.91
GYPB-203ENST00000503255 ZIC2O95409 532 aaPredicted RBP9.33□□□□□ -0.92
GYPB-203ENST00000503255 SLC16A10Q8TF71 515 aa9.33□□□□□ -0.92
GYPB-203ENST00000503255 ITPKCQ96DU7 683 aa9.33□□□□□ -0.92
GYPB-203ENST00000503255 ERBB4Q15303 1308 aa9.32□□□□□ -0.92
GYPB-203ENST00000503255 C6orf118Q5T5N4 469 aa9.32□□□□□ -0.92
GYPB-203ENST00000503255 STK17AQ9UEE5 414 aa9.32□□□□□ -0.92
GYPB-203ENST00000503255 SCARF1Q14162 830 aa9.3□□□□□ -0.92
GYPB-203ENST00000503255 BPHLQ86WA6 291 aaPredicted RBP9.3□□□□□ -0.92
GYPB-203ENST00000503255 H3BM21 787 aa9.29□□□□□ -0.92
GYPB-203ENST00000503255 CTDSPL2Q05D32 466 aa9.29□□□□□ -0.92
GYPB-203ENST00000503255 FBXO31Q5XUX0 539 aaPredicted RBP9.29□□□□□ -0.92
GYPB-203ENST00000503255 MAGEB6P1A0A0J9YX57 407 aa9.28□□□□□ -0.92
GYPB-203ENST00000503255 LORP23490 312 aaPredicted RBP9.28□□□□□ -0.92
GYPB-203ENST00000503255 CLK2P49760 499 aaKnown RBP9.28□□□□□ -0.92
GYPB-203ENST00000503255 NR5A1Q13285 461 aa9.27□□□□□ -0.93
GYPB-203ENST00000503255 TUSC1Q2TAM9 212 aa9.27□□□□□ -0.93
GYPB-203ENST00000503255 SH3RF1Q7Z6J0 888 aa9.27□□□□□ -0.93
GYPB-203ENST00000503255 IRF7Q92985 503 aa9.27□□□□□ -0.93
GYPB-203ENST00000503255 CARD14Q9BXL6 1004 aa9.26□□□□□ -0.93
GYPB-203ENST00000503255 FSHRP23945 695 aa9.25□□□□□ -0.93
GYPB-203ENST00000503255 SH3BP5LQ7L8J4 393 aa9.25□□□□□ -0.93
GYPB-203ENST00000503255 HELBQ8NG08 1087 aaPredicted RBP9.25□□□□□ -0.93
GYPB-203ENST00000503255 LRRN4Q8WUT4 740 aa9.25□□□□□ -0.93
GYPB-203ENST00000503255 BMP2P12643 396 aa9.24□□□□□ -0.93
GYPB-203ENST00000503255 VASH1Q7L8A9 365 aaPredicted RBP9.24□□□□□ -0.93
GYPB-203ENST00000503255 NPAS3Q8IXF0 933 aa9.24□□□□□ -0.93
GYPB-203ENST00000503255 PROCA1Q8NCQ7 364 aaPredicted RBP9.24□□□□□ -0.93
GYPB-203ENST00000503255 C1QTNF2Q9BXJ5 285 aa9.24□□□□□ -0.93
GYPB-203ENST00000503255 GPBP1L1Q9HC44 474 aaPredicted RBP9.24□□□□□ -0.93
GYPB-203ENST00000503255 MAN1A2O60476 641 aa9.23□□□□□ -0.93
GYPB-203ENST00000503255 ARMC2Q8NEN0 867 aa9.23□□□□□ -0.93
GYPB-203ENST00000503255 RSPH6AQ9H0K4 717 aa9.23□□□□□ -0.93
GYPB-203ENST00000503255 ZSCAN1Q8NBB4 408 aa9.22□□□□□ -0.93
GYPB-203ENST00000503255 NBPF14Q5TI25 921 aa9.21□□□□□ -0.94
GYPB-203ENST00000503255 LINC00528Q8N1L1 170 aa9.21□□□□□ -0.94
GYPB-203ENST00000503255 ATP1B4Q9UN42 357 aaPredicted RBP9.21□□□□□ -0.94
GYPB-203ENST00000503255 NR6A1Q15406 480 aa9.2□□□□□ -0.94
GYPB-203ENST00000503255 ERFEQ4G0M1 354 aa9.2□□□□□ -0.94
GYPB-203ENST00000503255 MEIOBQ8N635 442 aa9.2□□□□□ -0.94
GYPB-203ENST00000503255 FAM117AQ9C073 453 aa9.2□□□□□ -0.94
GYPB-203ENST00000503255 CBLBQ13191 982 aa9.19□□□□□ -0.94
GYPB-203ENST00000503255 DNMT3LQ9UJW3 386 aa9.19□□□□□ -0.94
GYPB-203ENST00000503255 FIGNL2A6NMB9 653 aa9.18□□□□□ -0.94
GYPB-203ENST00000503255 UPP2O95045 317 aa9.18□□□□□ -0.94
GYPB-203ENST00000503255 TRMT44Q8IYL2 757 aaKnown RBP9.18□□□□□ -0.94
GYPB-203ENST00000503255 CCDC116Q8IYX3 515 aa9.18□□□□□ -0.94
GYPB-203ENST00000503255 SOS2Q07890 1332 aaPredicted RBP9.17□□□□□ -0.94
GYPB-203ENST00000503255 PPFIA3O75145 1194 aa9.17□□□□□ -0.94
GYPB-203ENST00000503255 SKIV2LQ15477 1246 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms