RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 PTPN5P54829 565 aa15.21■□□□□ 0.03
EXOSC9-203ENST00000503139 NUDT12Q9BQG2 462 aa15.21■□□□□ 0.03
EXOSC9-203ENST00000503139 FBXO45P0C2W1 286 aa15.19■□□□□ 0.02
EXOSC9-203ENST00000503139 NR1H3Q13133 447 aa15.19■□□□□ 0.02
EXOSC9-203ENST00000503139 CTHP32929 405 aa15.18■□□□□ 0.02
EXOSC9-203ENST00000503139 KCNH2Q12809 1159 aa15.18■□□□□ 0.02
EXOSC9-203ENST00000503139 IL21Q9HBE4 155 aa15.18■□□□□ 0.02
EXOSC9-203ENST00000503139 ZNF516Q92618 1163 aa15.17■□□□□ 0.02
EXOSC9-203ENST00000503139 ZBBXA8MT70 800 aa15.16■□□□□ 0.02
EXOSC9-203ENST00000503139 MYT1LQ9UL68 1186 aa15.16■□□□□ 0.02
EXOSC9-203ENST00000503139 UCN2Q96RP3 112 aa15.15■□□□□ 0.02
EXOSC9-203ENST00000503139 CFAP70Q5T0N1 1121 aa15.14■□□□□ 0.01
EXOSC9-203ENST00000503139 EIF4G2P78344 907 aaKnown RBP eCLIP15.13■□□□□ 0.01
EXOSC9-203ENST00000503139 PPP1R12CQ9BZL4 782 aa15.13■□□□□ 0.01
EXOSC9-203ENST00000503139 SEMA3FQ13275 785 aa15.12■□□□□ 0.01
EXOSC9-203ENST00000503139 PPP1R15AO75807 674 aaPredicted RBP15.11■□□□□ 0.01
EXOSC9-203ENST00000503139 ARMC2Q8NEN0 867 aa15.11■□□□□ 0.01
EXOSC9-203ENST00000503139 GPKOWQ92917 476 aaPredicted RBP eCLIP15.11■□□□□ 0.01
EXOSC9-203ENST00000503139 SLC6A16Q9GZN6 736 aa15.11■□□□□ 0.01
EXOSC9-203ENST00000503139 GPSM3Q9Y4H4 160 aa15.1■□□□□ 0.01
EXOSC9-203ENST00000503139 PDXDC2PQ6P474 469 aa15.09■□□□□ 0.01
EXOSC9-203ENST00000503139 OCSTAMPQ9BR26 566 aa15.09■□□□□ 0.01
EXOSC9-203ENST00000503139 PALM3A6NDB9 673 aaPredicted RBP15.08■□□□□ 0
EXOSC9-203ENST00000503139 PTCRAQ6ISU1 281 aaPredicted RBP15.08■□□□□ 0
EXOSC9-203ENST00000503139 NKX2-3Q8TAU0 364 aa15.08■□□□□ 0
EXOSC9-203ENST00000503139 SRPK2P78362 688 aaKnown RBP15.07■□□□□ 0
EXOSC9-203ENST00000503139 NBPF14Q5TI25 921 aa15.07■□□□□ 0
EXOSC9-203ENST00000503139 UNC93B1Q9H1C4 597 aa15.07■□□□□ 0
EXOSC9-203ENST00000503139 PBXIP1Q96AQ6 731 aa15.06■□□□□ 0
EXOSC9-203ENST00000503139 PTK2Q05397 1052 aa15.05■□□□□ -0
EXOSC9-203ENST00000503139 TFIP11Q9UBB9 837 aaKnown RBP15.05■□□□□ -0
EXOSC9-203ENST00000503139 S1PR4O95977 384 aa15.04■□□□□ -0
EXOSC9-203ENST00000503139 PDIA4P13667 645 aaKnown RBP15.04■□□□□ -0
EXOSC9-203ENST00000503139 CCDC24Q8N4L8 307 aa15.04■□□□□ -0
EXOSC9-203ENST00000503139 RETREG2Q8NC44 543 aa15.03■□□□□ -0
EXOSC9-203ENST00000503139 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.02■□□□□ -0
EXOSC9-203ENST00000503139 RFX1P22670 979 aa15.02■□□□□ -0
EXOSC9-203ENST00000503139 TBC1D9Q6ZT07 1266 aa15.02■□□□□ -0
EXOSC9-203ENST00000503139 MAFBQ9Y5Q3 323 aaPredicted RBP15.02■□□□□ -0
EXOSC9-203ENST00000503139 SH3BP5LQ7L8J4 393 aa15.01□□□□□ -0.01
EXOSC9-203ENST00000503139 LMOD1P29536 600 aaPredicted RBP14.99□□□□□ -0.01
EXOSC9-203ENST00000503139 TRAIPQ9BWF2 469 aa14.99□□□□□ -0.01
EXOSC9-203ENST00000503139 FCF1Q9Y324 198 aaKnown RBP14.99□□□□□ -0.01
EXOSC9-203ENST00000503139 PIK3CDO00329 1044 aa14.98□□□□□ -0.01
EXOSC9-203ENST00000503139 ATP9BO43861 1147 aa14.98□□□□□ -0.01
EXOSC9-203ENST00000503139 SH3RF1Q7Z6J0 888 aa14.97□□□□□ -0.01
EXOSC9-203ENST00000503139 NFATC2IPQ8NCF5 419 aa14.97□□□□□ -0.01
EXOSC9-203ENST00000503139 ADAM32Q8TC27 787 aa14.97□□□□□ -0.01
EXOSC9-203ENST00000503139 ARHGAP9Q9BRR9 750 aa14.97□□□□□ -0.01
EXOSC9-203ENST00000503139 ITGBL1O95965 494 aaPredicted RBP14.96□□□□□ -0.01
EXOSC9-203ENST00000503139 HCSTQ9UBK5 93 aa14.96□□□□□ -0.01
EXOSC9-203ENST00000503139 ACIN1Q9UKV3 1341 aaKnown RBP14.95□□□□□ -0.02
EXOSC9-203ENST00000503139 MCCD1P59942 119 aaPredicted RBP14.95□□□□□ -0.02
EXOSC9-203ENST00000503139 TRIM26Q12899 539 aaPredicted RBP14.95□□□□□ -0.02
EXOSC9-203ENST00000503139 CEP126Q9P2H0 1117 aa14.95□□□□□ -0.02
EXOSC9-203ENST00000503139 ZNF592Q92610 1267 aa14.94□□□□□ -0.02
EXOSC9-203ENST00000503139 RNF166Q96A37 237 aaPredicted RBP14.94□□□□□ -0.02
EXOSC9-203ENST00000503139 PCDHB9Q9Y5E1 797 aa14.94□□□□□ -0.02
EXOSC9-203ENST00000503139 FAM174AQ8TBP5 190 aa14.93□□□□□ -0.02
EXOSC9-203ENST00000503139 BAP1Q92560 729 aa14.93□□□□□ -0.02
EXOSC9-203ENST00000503139 KCNC4Q03721 635 aa14.92□□□□□ -0.02
EXOSC9-203ENST00000503139 PHTF2Q8N3S3 785 aa14.91□□□□□ -0.02
EXOSC9-203ENST00000503139 ZNF511Q8NB15 262 aa14.91□□□□□ -0.02
EXOSC9-203ENST00000503139 LINC01559Q495D7 138 aa14.9□□□□□ -0.02
EXOSC9-203ENST00000503139 ZBTB33Q86T24 672 aa14.9□□□□□ -0.02
EXOSC9-203ENST00000503139 SPNS2Q8IVW8 549 aa14.9□□□□□ -0.02
EXOSC9-203ENST00000503139 PPEF1O14829 653 aaPredicted RBP14.89□□□□□ -0.03
EXOSC9-203ENST00000503139 C4orf48Q5BLP8 95 aa14.89□□□□□ -0.03
EXOSC9-203ENST00000503139 PLEKHM2Q8IWE5 1019 aa14.89□□□□□ -0.03
EXOSC9-203ENST00000503139 FOXJ1Q92949 421 aa14.89□□□□□ -0.03
EXOSC9-203ENST00000503139 ATG7O95352 703 aa14.88□□□□□ -0.03
EXOSC9-203ENST00000503139 SKIP12755 728 aa14.88□□□□□ -0.03
EXOSC9-203ENST00000503139 BPHLQ86WA6 291 aaPredicted RBP14.88□□□□□ -0.03
EXOSC9-203ENST00000503139 PCDH10Q9P2E7 1040 aa14.88□□□□□ -0.03
EXOSC9-203ENST00000503139 USP17L3A6NCW0 530 aa14.87□□□□□ -0.03
EXOSC9-203ENST00000503139 USP17L4A6NCW7 530 aa14.87□□□□□ -0.03
EXOSC9-203ENST00000503139 USP17L5A8MUK1 530 aa14.87□□□□□ -0.03
EXOSC9-203ENST00000503139 ERFEQ4G0M1 354 aa14.87□□□□□ -0.03
EXOSC9-203ENST00000503139 KANK4Q5T7N3 995 aaPredicted RBP14.87□□□□□ -0.03
EXOSC9-203ENST00000503139 USP17L2Q6R6M4 530 aa14.87□□□□□ -0.03
EXOSC9-203ENST00000503139 USP17L1Q7RTZ2 530 aa14.87□□□□□ -0.03
EXOSC9-203ENST00000503139 CARD14Q9BXL6 1004 aa14.87□□□□□ -0.03
EXOSC9-203ENST00000503139 CHIC2Q9UKJ5 165 aa14.87□□□□□ -0.03
EXOSC9-203ENST00000503139 MAGEB6P1A0A0J9YX57 407 aa14.86□□□□□ -0.03
EXOSC9-203ENST00000503139 RNF223E7ERA6 249 aa14.86□□□□□ -0.03
EXOSC9-203ENST00000503139 SLFNL1Q499Z3 407 aa14.86□□□□□ -0.03
EXOSC9-203ENST00000503139 CDCA8Q53HL2 280 aa14.85□□□□□ -0.03
EXOSC9-203ENST00000503139 RNF135Q8IUD6 432 aa14.85□□□□□ -0.03
EXOSC9-203ENST00000503139 C1QTNF2Q9BXJ5 285 aa14.85□□□□□ -0.03
EXOSC9-203ENST00000503139 USTQ9Y2C2 406 aa14.85□□□□□ -0.03
EXOSC9-203ENST00000503139 SH3BP2P78314 561 aa14.84□□□□□ -0.03
EXOSC9-203ENST00000503139 DZIP3Q86Y13 1208 aaKnown RBP14.84□□□□□ -0.03
EXOSC9-203ENST00000503139 ANKLE1Q8NAG6 615 aa14.84□□□□□ -0.03
EXOSC9-203ENST00000503139 VRTNQ9H8Y1 702 aa14.84□□□□□ -0.03
EXOSC9-203ENST00000503139 PLA2G2CQ5R387 149 aa14.83□□□□□ -0.04
EXOSC9-203ENST00000503139 PDE4CQ08493 712 aa14.82□□□□□ -0.04
EXOSC9-203ENST00000503139 AGERQ15109 404 aa14.82□□□□□ -0.04
EXOSC9-203ENST00000503139 DEPDC4Q8N2C3 294 aa14.82□□□□□ -0.04
EXOSC9-203ENST00000503139 PLPP7Q8NBV4 271 aa14.82□□□□□ -0.04
EXOSC9-203ENST00000503139 CSB-PGBD3P0DP91 1061 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms