RNA–Protein interactions for RNA: ENST00000503114.1

TRIM41-203, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 1,904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-203ENST00000503114 CT47B1P0C2W7 299 aaPredicted RBP24.55■■□□□ 1.52
TRIM41-203ENST00000503114 HDGFL2Q7Z4V5 671 aaPredicted RBP24.54■■□□□ 1.52
TRIM41-203ENST00000503114 CDK19Q9BWU1 502 aa24.54■■□□□ 1.52
TRIM41-203ENST00000503114 SENP3Q9H4L4 574 aaPredicted RBP24.54■■□□□ 1.52
TRIM41-203ENST00000503114 ATP7BP35670 1465 aa24.54■■□□□ 1.52
TRIM41-203ENST00000503114 RTL5Q5HYW3 569 aaPredicted RBP24.53■■□□□ 1.52
TRIM41-203ENST00000503114 RLBP1P12271 317 aa24.53■■□□□ 1.52
TRIM41-203ENST00000503114 MAPK8IP3Q9UPT6 1336 aa24.53■■□□□ 1.52
TRIM41-203ENST00000503114 NRXN3Q9Y4C0 1643 aa24.52■■□□□ 1.52
TRIM41-203ENST00000503114 RIMS2Q9UQ26 1411 aa24.52■■□□□ 1.52
TRIM41-203ENST00000503114 TMPOP42166 694 aaKnown RBP24.51■■□□□ 1.51
TRIM41-203ENST00000503114 PMFBP1Q8TBY8 1022 aa24.51■■□□□ 1.51
TRIM41-203ENST00000503114 STAG3Q9UJ98 1225 aa24.51■■□□□ 1.51
TRIM41-203ENST00000503114 TRIM35Q9UPQ4 493 aa24.5■■□□□ 1.51
TRIM41-203ENST00000503114 IL16Q14005 1332 aa24.5■■□□□ 1.51
TRIM41-203ENST00000503114 U2SURPO15042 1029 aaKnown RBP24.49■■□□□ 1.51
TRIM41-203ENST00000503114 TNNQ9UQP3 1299 aa24.49■■□□□ 1.51
TRIM41-203ENST00000503114 ZMYM3Q14202 1370 aa24.49■■□□□ 1.51
TRIM41-203ENST00000503114 PPM1GO15355 546 aaPredicted RBP24.49■■□□□ 1.51
TRIM41-203ENST00000503114 BCL2L13Q9BXK5 485 aa24.48■■□□□ 1.51
TRIM41-203ENST00000503114 CABP1Q9NZU7 370 aa24.48■■□□□ 1.51
TRIM41-203ENST00000503114 KNDC1Q76NI1 1749 aa24.48■■□□□ 1.51
TRIM41-203ENST00000503114 USP35Q9P2H5 1018 aa24.47■■□□□ 1.51
TRIM41-203ENST00000503114 LAS1LQ9Y4W2 734 aaKnown RBP24.47■■□□□ 1.51
TRIM41-203ENST00000503114 PCDHB15Q9Y5E8 787 aa24.47■■□□□ 1.51
TRIM41-203ENST00000503114 DIAPH1O60610 1272 aaKnown RBP24.46■■□□□ 1.51
TRIM41-203ENST00000503114 BCL11AQ9H165 835 aa24.46■■□□□ 1.51
TRIM41-203ENST00000503114 MAP2P11137 1827 aaKnown RBP24.46■■□□□ 1.51
TRIM41-203ENST00000503114 LRRC7Q96NW7 1537 aa24.45■■□□□ 1.51
TRIM41-203ENST00000503114 MVPQ14764 893 aaKnown RBP24.44■■□□□ 1.5
TRIM41-203ENST00000503114 ZKSCAN2Q63HK3 967 aa24.44■■□□□ 1.5
TRIM41-203ENST00000503114 PNNQ9H307 717 aaKnown RBP24.44■■□□□ 1.5
TRIM41-203ENST00000503114 TSR2Q969E8 191 aaKnown RBP24.43■■□□□ 1.5
TRIM41-203ENST00000503114 EXOSC9Q06265 439 aaKnown RBP24.41■■□□□ 1.5
TRIM41-203ENST00000503114 CPSF1Q10570 1443 aaKnown RBP24.41■■□□□ 1.5
TRIM41-203ENST00000503114 FAM135BQ49AJ0 1406 aa24.41■■□□□ 1.5
TRIM41-203ENST00000503114 WAPLQ7Z5K2 1190 aa24.41■■□□□ 1.5
TRIM41-203ENST00000503114 MON2Q7Z3U7 1717 aa24.4■■□□□ 1.5
TRIM41-203ENST00000503114 DZIP1LQ8IYY4 767 aaKnown RBP24.4■■□□□ 1.5
TRIM41-203ENST00000503114 NEFMP07197 916 aa24.39■■□□□ 1.5
TRIM41-203ENST00000503114 USP19O94966 1318 aa24.39■■□□□ 1.5
TRIM41-203ENST00000503114 FCHSD2O94868 740 aa24.39■■□□□ 1.49
TRIM41-203ENST00000503114 RIPK4P57078 832 aa24.39■■□□□ 1.49
TRIM41-203ENST00000503114 RWDD1Q9H446 243 aaPredicted RBP24.39■■□□□ 1.49
TRIM41-203ENST00000503114 EDC4Q6P2E9 1401 aaKnown RBP24.39■■□□□ 1.49
TRIM41-203ENST00000503114 AKAP12Q02952 1782 aa24.38■■□□□ 1.49
TRIM41-203ENST00000503114 SMC4Q9NTJ3 1288 aa24.37■■□□□ 1.49
TRIM41-203ENST00000503114 TECPR2O15040 1411 aa24.37■■□□□ 1.49
TRIM41-203ENST00000503114 POLKQ9UBT6 870 aa24.37■■□□□ 1.49
TRIM41-203ENST00000503114 CPS1P31327 1500 aa24.37■■□□□ 1.49
TRIM41-203ENST00000503114 FTSJ3Q8IY81 847 aaKnown RBP24.36■■□□□ 1.49
TRIM41-203ENST00000503114 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.36■■□□□ 1.49
TRIM41-203ENST00000503114 SSH1Q8WYL5 1049 aa24.36■■□□□ 1.49
TRIM41-203ENST00000503114 RSPH6AQ9H0K4 717 aa24.36■■□□□ 1.49
TRIM41-203ENST00000503114 PDZRN3Q9UPQ7 1066 aa24.35■■□□□ 1.49
TRIM41-203ENST00000503114 TRIM27P14373 513 aa24.35■■□□□ 1.49
TRIM41-203ENST00000503114 DAXXQ9UER7 740 aaPredicted RBP24.35■■□□□ 1.49
TRIM41-203ENST00000503114 METP08581 1390 aa24.35■■□□□ 1.49
TRIM41-203ENST00000503114 PPIP5K1Q6PFW1 1433 aa24.34■■□□□ 1.49
TRIM41-203ENST00000503114 CDK12Q9NYV4 1490 aaPredicted RBP24.34■■□□□ 1.49
TRIM41-203ENST00000503114 WASLO00401 505 aaPredicted RBP24.34■■□□□ 1.49
TRIM41-203ENST00000503114 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.34■■□□□ 1.49
TRIM41-203ENST00000503114 ITSN1Q15811 1721 aa24.34■■□□□ 1.49
TRIM41-203ENST00000503114 SLC4A3P48751 1232 aa24.33■■□□□ 1.49
TRIM41-203ENST00000503114 ATF7IPQ6VMQ6 1270 aa24.33■■□□□ 1.49
TRIM41-203ENST00000503114 C3P01024 1663 aa24.33■■□□□ 1.48
TRIM41-203ENST00000503114 SIRT1Q96EB6 747 aa24.32■■□□□ 1.48
TRIM41-203ENST00000503114 AATKQ6ZMQ8 1374 aa24.31■■□□□ 1.48
TRIM41-203ENST00000503114 MLECQ14165 292 aa24.31■■□□□ 1.48
TRIM41-203ENST00000503114 DDX19BQ9UMR2 479 aa24.31■■□□□ 1.48
TRIM41-203ENST00000503114 UBR1Q8IWV7 1749 aa24.3■■□□□ 1.48
TRIM41-203ENST00000503114 PRKAR2BP31323 418 aa24.3■■□□□ 1.48
TRIM41-203ENST00000503114 KIF16BQ96L93 1317 aa24.3■■□□□ 1.48
TRIM41-203ENST00000503114 SEC24BO95487 1268 aa24.29■■□□□ 1.48
TRIM41-203ENST00000503114 ALDH1L2Q3SY69 923 aa24.29■■□□□ 1.48
TRIM41-203ENST00000503114 HDAC1Q13547 482 aaPredicted RBP24.29■■□□□ 1.48
TRIM41-203ENST00000503114 DLG5Q8TDM6 1919 aa24.29■■□□□ 1.48
TRIM41-203ENST00000503114 NOB1Q9ULX3 412 aaKnown RBP24.28■■□□□ 1.48
TRIM41-203ENST00000503114 FBLN1P23142 703 aa24.27■■□□□ 1.48
TRIM41-203ENST00000503114 BRPF1P55201 1214 aaPredicted RBP24.27■■□□□ 1.48
TRIM41-203ENST00000503114 NFE2L2Q16236 605 aa24.26■■□□□ 1.47
TRIM41-203ENST00000503114 ZNF428Q96B54 188 aa24.26■■□□□ 1.47
TRIM41-203ENST00000503114 IL13P35225 146 aa24.25■■□□□ 1.47
TRIM41-203ENST00000503114 NFKBIBQ15653 356 aa24.25■■□□□ 1.47
TRIM41-203ENST00000503114 ITPRIPQ8IWB1 547 aa24.25■■□□□ 1.47
TRIM41-203ENST00000503114 IPO8O15397 1037 aaKnown RBP24.24■■□□□ 1.47
TRIM41-203ENST00000503114 NME9Q86XW9 330 aa24.24■■□□□ 1.47
TRIM41-203ENST00000503114 NUDT16Q96DE0 195 aaKnown RBP24.24■■□□□ 1.47
TRIM41-203ENST00000503114 EMILIN1Q9Y6C2 1016 aa24.24■■□□□ 1.47
TRIM41-203ENST00000503114 NRKQ7Z2Y5 1582 aa24.24■■□□□ 1.47
TRIM41-203ENST00000503114 TNRQ92752 1358 aa24.24■■□□□ 1.47
TRIM41-203ENST00000503114 TXNDC2Q86VQ3 553 aa24.23■■□□□ 1.47
TRIM41-203ENST00000503114 TOPAZ1Q8N9V7 1692 aa24.23■■□□□ 1.47
TRIM41-203ENST00000503114 HDGFP51858 240 aaKnown RBP24.23■■□□□ 1.47
TRIM41-203ENST00000503114 TMEM57Q8N5G2 664 aa24.23■■□□□ 1.47
TRIM41-203ENST00000503114 PHACTR3Q96KR7 559 aa24.22■■□□□ 1.47
TRIM41-203ENST00000503114 CCDC61Q9Y6R9 512 aa24.22■■□□□ 1.47
TRIM41-203ENST00000503114 CALD1Q05682 793 aaKnown RBP24.22■■□□□ 1.47
TRIM41-203ENST00000503114 ESF1Q9H501 851 aaKnown RBP24.22■■□□□ 1.47
TRIM41-203ENST00000503114 ZBTB40Q9NUA8 1239 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms