RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 NGDNQ8NEJ9 315 aaKnown RBP24.82■■□□□ 1.56
UBE2D3-213ENST00000502690 CCDC9Q9Y3X0 531 aaKnown RBP24.81■■□□□ 1.56
UBE2D3-213ENST00000502690 QRICH2Q9H0J4 1663 aa24.81■■□□□ 1.56
UBE2D3-213ENST00000502690 CDK19Q9BWU1 502 aa24.8■■□□□ 1.56
UBE2D3-213ENST00000502690 BTG4Q9NY30 223 aa24.8■■□□□ 1.56
UBE2D3-213ENST00000502690 ONECUT3O60422 494 aaPredicted RBP24.79■■□□□ 1.56
UBE2D3-213ENST00000502690 PAK3O75914 559 aaPredicted RBP24.79■■□□□ 1.56
UBE2D3-213ENST00000502690 SRCAPQ6ZRS2 3230 aa24.78■■□□□ 1.56
UBE2D3-213ENST00000502690 BLMP54132 1417 aaPredicted RBP24.78■■□□□ 1.56
UBE2D3-213ENST00000502690 POLR3AO14802 1390 aaPredicted RBP24.77■■□□□ 1.56
UBE2D3-213ENST00000502690 THSD7AQ9UPZ6 1657 aa24.76■■□□□ 1.55
UBE2D3-213ENST00000502690 CCDC125Q86Z20 511 aa24.75■■□□□ 1.55
UBE2D3-213ENST00000502690 NRKQ7Z2Y5 1582 aa24.75■■□□□ 1.55
UBE2D3-213ENST00000502690 FAM98CQ17RN3 349 aaKnown RBP24.74■■□□□ 1.55
UBE2D3-213ENST00000502690 NUTM2GQ5VZR2 741 aa24.74■■□□□ 1.55
UBE2D3-213ENST00000502690 DEFB132Q7Z7B7 95 aa24.74■■□□□ 1.55
UBE2D3-213ENST00000502690 TRPM1Q7Z4N2 1603 aa24.73■■□□□ 1.55
UBE2D3-213ENST00000502690 KIAA0232Q92628 1395 aa24.73■■□□□ 1.55
UBE2D3-213ENST00000502690 ACEP12821 1306 aa24.73■■□□□ 1.55
UBE2D3-213ENST00000502690 KRT27Q7Z3Y8 459 aa24.72■■□□□ 1.55
UBE2D3-213ENST00000502690 SPATA31A5Q5VU36 1347 aa24.7■■□□□ 1.54
UBE2D3-213ENST00000502690 SPATA31A7Q8IWB4 1347 aa24.7■■□□□ 1.54
UBE2D3-213ENST00000502690 CHRNA2Q15822 529 aa24.7■■□□□ 1.54
UBE2D3-213ENST00000502690 PRDM11Q9NQV5 511 aa24.7■■□□□ 1.54
UBE2D3-213ENST00000502690 A0A0G2JS52 829 aa24.69■■□□□ 1.54
UBE2D3-213ENST00000502690 MYT1Q01538 1121 aa24.69■■□□□ 1.54
UBE2D3-213ENST00000502690 NBPF8Q3BBV2 869 aa24.69■■□□□ 1.54
UBE2D3-213ENST00000502690 ZRANB1Q9UGI0 708 aa24.69■■□□□ 1.54
UBE2D3-213ENST00000502690 CCDC61Q9Y6R9 512 aa24.69■■□□□ 1.54
UBE2D3-213ENST00000502690 PLEKHG3A1L390 1219 aa24.68■■□□□ 1.54
UBE2D3-213ENST00000502690 L3MBTL2Q969R5 705 aa24.68■■□□□ 1.54
UBE2D3-213ENST00000502690 TNS1Q9HBL0 1735 aaKnown RBP24.68■■□□□ 1.54
UBE2D3-213ENST00000502690 LMO7Q8WWI1 1683 aa24.68■■□□□ 1.54
UBE2D3-213ENST00000502690 PPIP5K1Q6PFW1 1433 aa24.68■■□□□ 1.54
UBE2D3-213ENST00000502690 CENPJQ9HC77 1338 aaPredicted RBP24.67■■□□□ 1.54
UBE2D3-213ENST00000502690 FAM182BQ5T319 152 aa24.67■■□□□ 1.54
UBE2D3-213ENST00000502690 SIN3AQ96ST3 1273 aa24.67■■□□□ 1.54
UBE2D3-213ENST00000502690 RGPD1P0DJD0 1748 aa24.66■■□□□ 1.54
UBE2D3-213ENST00000502690 ZC3H6P61129 1189 aaKnown RBP24.66■■□□□ 1.54
UBE2D3-213ENST00000502690 CABP2Q9NPB3 220 aa24.66■■□□□ 1.54
UBE2D3-213ENST00000502690 CAMTA1Q9Y6Y1 1673 aa24.64■■□□□ 1.53
UBE2D3-213ENST00000502690 SRPK2P78362 688 aaKnown RBP24.63■■□□□ 1.53
UBE2D3-213ENST00000502690 USP19O94966 1318 aa24.61■■□□□ 1.53
UBE2D3-213ENST00000502690 SPATA31A1Q5TZJ5 1347 aa24.61■■□□□ 1.53
UBE2D3-213ENST00000502690 STRN4Q9NRL3 753 aa24.61■■□□□ 1.53
UBE2D3-213ENST00000502690 PIK3C2AO00443 1686 aa24.61■■□□□ 1.53
UBE2D3-213ENST00000502690 SSH2Q76I76 1423 aa24.6■■□□□ 1.53
UBE2D3-213ENST00000502690 SF3B2Q13435 895 aaKnown RBP24.59■■□□□ 1.53
UBE2D3-213ENST00000502690 ABTB2Q8N961 1025 aa24.59■■□□□ 1.53
UBE2D3-213ENST00000502690 AKAP12Q02952 1782 aa24.58■■□□□ 1.53
UBE2D3-213ENST00000502690 USP6P35125 1406 aa24.57■■□□□ 1.52
UBE2D3-213ENST00000502690 CPDO75976 1380 aa24.56■■□□□ 1.52
UBE2D3-213ENST00000502690 NEUROD1Q13562 356 aa24.55■■□□□ 1.52
UBE2D3-213ENST00000502690 USP35Q9P2H5 1018 aa24.55■■□□□ 1.52
UBE2D3-213ENST00000502690 SLIT3O75094 1523 aa24.55■■□□□ 1.52
UBE2D3-213ENST00000502690 CABP1Q9NZU7 370 aa24.54■■□□□ 1.52
UBE2D3-213ENST00000502690 COL18A1P39060 1754 aa24.54■■□□□ 1.52
UBE2D3-213ENST00000502690 LARP1Q6PKG0 1096 aaKnown RBP24.53■■□□□ 1.52
UBE2D3-213ENST00000502690 COL5A2P05997 1499 aaPredicted RBP24.52■■□□□ 1.52
UBE2D3-213ENST00000502690 LRP5O75197 1615 aa24.52■■□□□ 1.52
UBE2D3-213ENST00000502690 ROCK2O75116 1388 aaKnown RBP24.52■■□□□ 1.52
UBE2D3-213ENST00000502690 GCP02774 474 aa24.51■■□□□ 1.51
UBE2D3-213ENST00000502690 EN1Q05925 392 aaPredicted RBP24.51■■□□□ 1.51
UBE2D3-213ENST00000502690 PARP4Q9UKK3 1724 aaKnown RBP24.51■■□□□ 1.51
UBE2D3-213ENST00000502690 RGPD5Q99666 1765 aa24.51■■□□□ 1.51
UBE2D3-213ENST00000502690 BAG6P46379 1132 aa24.5■■□□□ 1.51
UBE2D3-213ENST00000502690 WNK3Q9BYP7 1800 aa24.49■■□□□ 1.51
UBE2D3-213ENST00000502690 PSDA5PKW4 1024 aaPredicted RBP24.49■■□□□ 1.51
UBE2D3-213ENST00000502690 NLRP13Q86W25 1043 aa24.49■■□□□ 1.51
UBE2D3-213ENST00000502690 DISP2A7MBM2 1401 aa24.49■■□□□ 1.51
UBE2D3-213ENST00000502690 MON2Q7Z3U7 1717 aa24.47■■□□□ 1.51
UBE2D3-213ENST00000502690 BRD4O60885 1362 aaPredicted RBP24.47■■□□□ 1.51
UBE2D3-213ENST00000502690 EVC2Q86UK5 1308 aa24.47■■□□□ 1.51
UBE2D3-213ENST00000502690 EVA1CP58658 441 aa24.47■■□□□ 1.51
UBE2D3-213ENST00000502690 BARGINQ6ZT62 677 aa24.46■■□□□ 1.51
UBE2D3-213ENST00000502690 RREB1Q92766 1687 aa24.46■■□□□ 1.51
UBE2D3-213ENST00000502690 LRRC37A3O60309 1634 aa24.46■■□□□ 1.51
UBE2D3-213ENST00000502690 ZBTB7CA1YPR0 619 aa24.44■■□□□ 1.5
UBE2D3-213ENST00000502690 TRIM37O94972 964 aa24.44■■□□□ 1.5
UBE2D3-213ENST00000502690 NLRP6P59044 892 aa24.44■■□□□ 1.5
UBE2D3-213ENST00000502690 NUP188Q5SRE5 1749 aa24.44■■□□□ 1.5
UBE2D3-213ENST00000502690 PEAK1Q9H792 1746 aa24.44■■□□□ 1.5
UBE2D3-213ENST00000502690 EZH2Q15910 746 aaKnown RBP24.43■■□□□ 1.5
UBE2D3-213ENST00000502690 TCP11L2Q8N4U5 519 aa24.43■■□□□ 1.5
UBE2D3-213ENST00000502690 SBF2Q86WG5 1849 aa24.42■■□□□ 1.5
UBE2D3-213ENST00000502690 FAM196AQ6ZSG2 479 aa24.41■■□□□ 1.5
UBE2D3-213ENST00000502690 CRB1P82279 1406 aa24.41■■□□□ 1.5
UBE2D3-213ENST00000502690 AATKQ6ZMQ8 1374 aa24.41■■□□□ 1.5
UBE2D3-213ENST00000502690 CPSF1Q10570 1443 aaKnown RBP24.4■■□□□ 1.5
UBE2D3-213ENST00000502690 NFAT5O94916 1531 aa24.4■■□□□ 1.5
UBE2D3-213ENST00000502690 TTC21BQ7Z4L5 1316 aa24.39■■□□□ 1.5
UBE2D3-213ENST00000502690 CAMKK2Q96RR4 588 aa24.39■■□□□ 1.49
UBE2D3-213ENST00000502690 AXIN2Q9Y2T1 843 aa24.38■■□□□ 1.49
UBE2D3-213ENST00000502690 CD163L1Q9NR16 1453 aa24.38■■□□□ 1.49
UBE2D3-213ENST00000502690 USP54Q70EL1 1684 aa24.37■■□□□ 1.49
UBE2D3-213ENST00000502690 PDE3BQ13370 1112 aa24.37■■□□□ 1.49
UBE2D3-213ENST00000502690 R3HDM1Q15032 1099 aaKnown RBP24.36■■□□□ 1.49
UBE2D3-213ENST00000502690 SBNO2Q9Y2G9 1366 aa24.35■■□□□ 1.49
UBE2D3-213ENST00000502690 SOX12O15370 315 aa24.35■■□□□ 1.49
UBE2D3-213ENST00000502690 THRAP3Q9Y2W1 955 aaKnown RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms