RNA–Protein interactions for RNA: ENST00000502582.1

CDC42SE2-203, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-203ENST00000502582 DACH1Q9UI36 760 aa7.63□□□□□ -1.19
CDC42SE2-203ENST00000502582 LINC01559Q495D7 138 aa7.62□□□□□ -1.19
CDC42SE2-203ENST00000502582 ZNF775Q96BV0 537 aaPredicted RBP7.62□□□□□ -1.19
CDC42SE2-203ENST00000502582 LILRB3O75022 631 aa7.61□□□□□ -1.19
CDC42SE2-203ENST00000502582 QPCTQ16769 361 aa7.61□□□□□ -1.19
CDC42SE2-203ENST00000502582 ZNF511Q8NB15 262 aa7.61□□□□□ -1.19
CDC42SE2-203ENST00000502582 HPS1Q92902 700 aa7.61□□□□□ -1.19
CDC42SE2-203ENST00000502582 DDRGK1Q96HY6 314 aa7.61□□□□□ -1.19
CDC42SE2-203ENST00000502582 CLK2P49760 499 aaKnown RBP7.6□□□□□ -1.19
CDC42SE2-203ENST00000502582 TPRNQ4KMQ1 711 aa7.6□□□□□ -1.19
CDC42SE2-203ENST00000502582 TSC1Q92574 1164 aa7.6□□□□□ -1.19
CDC42SE2-203ENST00000502582 F12P00748 615 aaPredicted RBP7.59□□□□□ -1.19
CDC42SE2-203ENST00000502582 VARSP26640 1264 aaKnown RBP7.59□□□□□ -1.19
CDC42SE2-203ENST00000502582 FAM117AQ9C073 453 aa7.59□□□□□ -1.19
CDC42SE2-203ENST00000502582 POLR3EQ9NVU0 708 aa7.59□□□□□ -1.19
CDC42SE2-203ENST00000502582 GMPR2Q9P2T1 348 aaKnown RBP7.59□□□□□ -1.19
CDC42SE2-203ENST00000502582 WASF2Q9Y6W5 498 aa7.59□□□□□ -1.19
CDC42SE2-203ENST00000502582 PER1O15534 1290 aaPredicted RBP7.58□□□□□ -1.2
CDC42SE2-203ENST00000502582 HELBQ8NG08 1087 aaPredicted RBP7.58□□□□□ -1.2
CDC42SE2-203ENST00000502582 MAP10Q9P2G4 905 aa7.58□□□□□ -1.2
CDC42SE2-203ENST00000502582 PLEKHG3A1L390 1219 aa7.57□□□□□ -1.2
CDC42SE2-203ENST00000502582 C11orf95C9JLR9 678 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE2-203ENST00000502582 RTL5Q5HYW3 569 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE2-203ENST00000502582 ATP13A2Q9NQ11 1180 aa7.57□□□□□ -1.2
CDC42SE2-203ENST00000502582 SKIV2LQ15477 1246 aaKnown RBP7.56□□□□□ -1.2
CDC42SE2-203ENST00000502582 NEUROD2Q15784 382 aa7.56□□□□□ -1.2
CDC42SE2-203ENST00000502582 MPNDQ8N594 471 aa7.56□□□□□ -1.2
CDC42SE2-203ENST00000502582 SH3D19Q5HYK7 790 aa7.55□□□□□ -1.2
CDC42SE2-203ENST00000502582 ARMC2Q8NEN0 867 aa7.55□□□□□ -1.2
CDC42SE2-203ENST00000502582 FAM174AQ8TBP5 190 aa7.55□□□□□ -1.2
CDC42SE2-203ENST00000502582 SENP2Q9HC62 589 aa7.55□□□□□ -1.2
CDC42SE2-203ENST00000502582 TLL2Q9Y6L7 1015 aa7.54□□□□□ -1.2
CDC42SE2-203ENST00000502582 AGERQ15109 404 aa7.53□□□□□ -1.2
CDC42SE2-203ENST00000502582 BPHLQ86WA6 291 aaPredicted RBP7.53□□□□□ -1.2
CDC42SE2-203ENST00000502582 FOXJ1Q92949 421 aa7.53□□□□□ -1.2
CDC42SE2-203ENST00000502582 ATP1B4Q9UN42 357 aaPredicted RBP7.53□□□□□ -1.2
CDC42SE2-203ENST00000502582 CAPN5O15484 640 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE2-203ENST00000502582 BRPF1P55201 1214 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE2-203ENST00000502582 CTDSPL2Q05D32 466 aa7.52□□□□□ -1.21
CDC42SE2-203ENST00000502582 KIFC2Q96AC6 838 aa7.52□□□□□ -1.21
CDC42SE2-203ENST00000502582 TRIM47Q96LD4 638 aa7.52□□□□□ -1.21
CDC42SE2-203ENST00000502582 NBPF14Q5TI25 921 aa7.51□□□□□ -1.21
CDC42SE2-203ENST00000502582 SNRPBP14678 240 aaKnown RBP7.5□□□□□ -1.21
CDC42SE2-203ENST00000502582 NNTQ13423 1086 aa7.5□□□□□ -1.21
CDC42SE2-203ENST00000502582 ARID5BQ14865 1188 aa7.5□□□□□ -1.21
CDC42SE2-203ENST00000502582 PROCA1Q8NCQ7 364 aaPredicted RBP7.5□□□□□ -1.21
CDC42SE2-203ENST00000502582 CDK15Q96Q40 435 aa7.5□□□□□ -1.21
CDC42SE2-203ENST00000502582 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.5□□□□□ -1.21
CDC42SE2-203ENST00000502582 GOPCQ9HD26 462 aa7.5□□□□□ -1.21
CDC42SE2-203ENST00000502582 ADH1CP00326 375 aa7.49□□□□□ -1.21
CDC42SE2-203ENST00000502582 C4orf48Q5BLP8 95 aa7.49□□□□□ -1.21
CDC42SE2-203ENST00000502582 PPP2R2DQ66LE6 453 aa7.49□□□□□ -1.21
CDC42SE2-203ENST00000502582 TREML4Q6UXN2 200 aa7.49□□□□□ -1.21
CDC42SE2-203ENST00000502582 GPKOWQ92917 476 aaPredicted RBP eCLIP7.48□□□□□ -1.21
CDC42SE2-203ENST00000502582 BMP1P13497 986 aa7.47□□□□□ -1.21
CDC42SE2-203ENST00000502582 NR5A1Q13285 461 aa7.47□□□□□ -1.21
CDC42SE2-203ENST00000502582 TRIM46Q7Z4K8 759 aa7.47□□□□□ -1.21
CDC42SE2-203ENST00000502582 SH3RF1Q7Z6J0 888 aa7.47□□□□□ -1.21
CDC42SE2-203ENST00000502582 IL27Q8NEV9 243 aa7.47□□□□□ -1.21
CDC42SE2-203ENST00000502582 WDR4P57081 412 aaKnown RBP7.46□□□□□ -1.22
CDC42SE2-203ENST00000502582 FBXO31Q5XUX0 539 aaPredicted RBP7.46□□□□□ -1.22
CDC42SE2-203ENST00000502582 SH3BP5LQ7L8J4 393 aa7.46□□□□□ -1.22
CDC42SE2-203ENST00000502582 LRRN4Q8WUT4 740 aa7.46□□□□□ -1.22
CDC42SE2-203ENST00000502582 MAGEB6P1A0A0J9YX57 407 aa7.45□□□□□ -1.22
CDC42SE2-203ENST00000502582 TIMP2P16035 220 aa7.45□□□□□ -1.22
CDC42SE2-203ENST00000502582 GRM5P41594 1212 aa7.45□□□□□ -1.22
CDC42SE2-203ENST00000502582 PCMTD1Q96MG8 357 aaPredicted RBP7.45□□□□□ -1.22
CDC42SE2-203ENST00000502582 C1QTNF2Q9BXJ5 285 aa7.45□□□□□ -1.22
CDC42SE2-203ENST00000502582 KLF16Q9BXK1 252 aaPredicted RBP7.45□□□□□ -1.22
CDC42SE2-203ENST00000502582 AP1G2O75843 785 aa7.44□□□□□ -1.22
CDC42SE2-203ENST00000502582 WFS1O76024 890 aa7.44□□□□□ -1.22
CDC42SE2-203ENST00000502582 LCE2AQ5TA79 106 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE2-203ENST00000502582 PDXDC2PQ6P474 469 aa7.44□□□□□ -1.22
CDC42SE2-203ENST00000502582 TRMT44Q8IYL2 757 aaKnown RBP7.44□□□□□ -1.22
CDC42SE2-203ENST00000502582 FKBPLQ9UIM3 349 aa7.44□□□□□ -1.22
CDC42SE2-203ENST00000502582 SCARF1Q14162 830 aa7.43□□□□□ -1.22
CDC42SE2-203ENST00000502582 MRPL14Q6P1L8 145 aaKnown RBP7.43□□□□□ -1.22
CDC42SE2-203ENST00000502582 VASH1Q7L8A9 365 aaPredicted RBP7.43□□□□□ -1.22
CDC42SE2-203ENST00000502582 ZFP42Q96MM3 310 aa7.43□□□□□ -1.22
CDC42SE2-203ENST00000502582 MAP4K5Q9Y4K4 846 aa7.43□□□□□ -1.22
CDC42SE2-203ENST00000502582 ZIC2O95409 532 aaPredicted RBP7.42□□□□□ -1.22
CDC42SE2-203ENST00000502582 NR3C2P08235 984 aa7.42□□□□□ -1.22
CDC42SE2-203ENST00000502582 PRKCSHP14314 528 aaPredicted RBP7.42□□□□□ -1.22
CDC42SE2-203ENST00000502582 NFX1Q12986 1120 aaKnown RBP7.42□□□□□ -1.22
CDC42SE2-203ENST00000502582 NR6A1Q15406 480 aa7.42□□□□□ -1.22
CDC42SE2-203ENST00000502582 CARD14Q9BXL6 1004 aa7.42□□□□□ -1.22
CDC42SE2-203ENST00000502582 TERTO14746 1132 aaKnown RBP7.41□□□□□ -1.22
CDC42SE2-203ENST00000502582 ITPKCQ96DU7 683 aa7.41□□□□□ -1.22
CDC42SE2-203ENST00000502582 ARHGAP9Q9BRR9 750 aa7.41□□□□□ -1.22
CDC42SE2-203ENST00000502582 ZC3H4Q9UPT8 1303 aaKnown RBP7.41□□□□□ -1.22
CDC42SE2-203ENST00000502582 FSHRP23945 695 aa7.4□□□□□ -1.22
CDC42SE2-203ENST00000502582 RFC5P40937 340 aa7.4□□□□□ -1.22
CDC42SE2-203ENST00000502582 ERFEQ4G0M1 354 aa7.4□□□□□ -1.22
CDC42SE2-203ENST00000502582 PNMA1Q8ND90 353 aa7.4□□□□□ -1.22
CDC42SE2-203ENST00000502582 PURBQ96QR8 312 aaKnown RBP7.4□□□□□ -1.22
CDC42SE2-203ENST00000502582 ZFAND3Q9H8U3 227 aa7.4□□□□□ -1.22
CDC42SE2-203ENST00000502582 USP17L8P0C7I0 530 aa7.39□□□□□ -1.23
CDC42SE2-203ENST00000502582 PTK2Q05397 1052 aa7.39□□□□□ -1.23
CDC42SE2-203ENST00000502582 TMEM259Q4ZIN3 620 aa7.39□□□□□ -1.23
CDC42SE2-203ENST00000502582 ZBTB33Q86T24 672 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms