RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 NINLQ9Y2I6 1382 aa19.08■□□□□ 0.65
NEAT1-201ENST00000499732 CDK19Q9BWU1 502 aa19.08■□□□□ 0.64
NEAT1-201ENST00000499732 NWD1Q149M9 1564 aa19.08■□□□□ 0.64
NEAT1-201ENST00000499732 MSH6P52701 1360 aa19.07■□□□□ 0.64
NEAT1-201ENST00000499732 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.06■□□□□ 0.64
NEAT1-201ENST00000499732 ADGRB2O60241 1585 aa19.06■□□□□ 0.64
NEAT1-201ENST00000499732 SENP3-EIF4A1A0A087X0R7 540 aa19.06■□□□□ 0.64
NEAT1-201ENST00000499732 WASLO00401 505 aaPredicted RBP19.06■□□□□ 0.64
NEAT1-201ENST00000499732 NBR1Q14596 966 aa19.06■□□□□ 0.64
NEAT1-201ENST00000499732 RTL5Q5HYW3 569 aaPredicted RBP19.04■□□□□ 0.64
NEAT1-201ENST00000499732 CD163L1Q9NR16 1453 aa19.03■□□□□ 0.64
NEAT1-201ENST00000499732 A0A1W2PP64 1363 aa19.03■□□□□ 0.64
NEAT1-201ENST00000499732 PDE4AP27815 886 aa19.02■□□□□ 0.63
NEAT1-201ENST00000499732 BACH2Q9BYV9 841 aa19.02■□□□□ 0.63
NEAT1-201ENST00000499732 NCOA3Q9Y6Q9 1424 aa19.02■□□□□ 0.63
NEAT1-201ENST00000499732 RBM33Q96EV2 1170 aaKnown RBP19■□□□□ 0.63
NEAT1-201ENST00000499732 CGNL1Q0VF96 1302 aa19■□□□□ 0.63
NEAT1-201ENST00000499732 SLAIN2Q9P270 581 aa18.99■□□□□ 0.63
NEAT1-201ENST00000499732 NSD2O96028 1365 aa18.99■□□□□ 0.63
NEAT1-201ENST00000499732 NALCNQ8IZF0 1738 aa18.99■□□□□ 0.63
NEAT1-201ENST00000499732 XIRP1Q702N8 1843 aaKnown RBP18.99■□□□□ 0.63
NEAT1-201ENST00000499732 C14orf37Q86TY3 774 aa18.98■□□□□ 0.63
NEAT1-201ENST00000499732 ANKRD26Q9UPS8 1709 aa18.98■□□□□ 0.63
NEAT1-201ENST00000499732 CDCA7LQ96GN5 454 aa18.97■□□□□ 0.63
NEAT1-201ENST00000499732 TERF2IPQ9NYB0 399 aa18.97■□□□□ 0.63
NEAT1-201ENST00000499732 SALL2Q9Y467 1007 aaPredicted RBP18.97■□□□□ 0.63
NEAT1-201ENST00000499732 NUDT16Q96DE0 195 aaKnown RBP18.96■□□□□ 0.63
NEAT1-201ENST00000499732 CCDC61Q9Y6R9 512 aa18.96■□□□□ 0.63
NEAT1-201ENST00000499732 ATP7BP35670 1465 aa18.96■□□□□ 0.63
NEAT1-201ENST00000499732 CABP1Q9NZU7 370 aa18.95■□□□□ 0.62
NEAT1-201ENST00000499732 MORC1Q86VD1 984 aa18.95■□□□□ 0.62
NEAT1-201ENST00000499732 USP35Q9P2H5 1018 aa18.95■□□□□ 0.62
NEAT1-201ENST00000499732 KIF20BQ96Q89 1820 aa18.94■□□□□ 0.62
NEAT1-201ENST00000499732 CDC42BPGQ6DT37 1551 aa18.94■□□□□ 0.62
NEAT1-201ENST00000499732 HDGFL2Q7Z4V5 671 aaPredicted RBP18.94■□□□□ 0.62
NEAT1-201ENST00000499732 CADPS2Q86UW7 1296 aa18.94■□□□□ 0.62
NEAT1-201ENST00000499732 C19orf44Q9H6X5 657 aa18.93■□□□□ 0.62
NEAT1-201ENST00000499732 ADAMTS8Q9UP79 889 aa18.93■□□□□ 0.62
NEAT1-201ENST00000499732 PPIP5K1Q6PFW1 1433 aa18.93■□□□□ 0.62
NEAT1-201ENST00000499732 ADGRL3Q9HAR2 1447 aa18.93■□□□□ 0.62
NEAT1-201ENST00000499732 ATF3P18847 181 aa18.93■□□□□ 0.62
NEAT1-201ENST00000499732 POLR3AO14802 1390 aaPredicted RBP18.92■□□□□ 0.62
NEAT1-201ENST00000499732 SHPRHQ149N8 1683 aa18.92■□□□□ 0.62
NEAT1-201ENST00000499732 TOPAZ1Q8N9V7 1692 aa18.92■□□□□ 0.62
NEAT1-201ENST00000499732 ROBO1Q9Y6N7 1651 aa18.92■□□□□ 0.62
NEAT1-201ENST00000499732 CRBNQ96SW2 442 aa18.92■□□□□ 0.62
NEAT1-201ENST00000499732 PRR36Q9H6K5 1346 aa18.92■□□□□ 0.62
NEAT1-201ENST00000499732 FMN2Q9NZ56 1722 aa18.92■□□□□ 0.62
NEAT1-201ENST00000499732 WDR43Q15061 677 aaKnown RBP eCLIP18.91■□□□□ 0.62
NEAT1-201ENST00000499732 DDRGK1Q96HY6 314 aa18.91■□□□□ 0.62
NEAT1-201ENST00000499732 NPM2Q86SE8 214 aaKnown RBP18.9■□□□□ 0.62
NEAT1-201ENST00000499732 CPSF1Q10570 1443 aaKnown RBP18.9■□□□□ 0.62
NEAT1-201ENST00000499732 ITSN1Q15811 1721 aa18.89■□□□□ 0.62
NEAT1-201ENST00000499732 JCADQ9P266 1359 aa18.89■□□□□ 0.61
NEAT1-201ENST00000499732 ANKARQ7Z5J8 1434 aa18.89■□□□□ 0.61
NEAT1-201ENST00000499732 MON2Q7Z3U7 1717 aa18.89■□□□□ 0.61
NEAT1-201ENST00000499732 AKAP12Q02952 1782 aa18.89■□□□□ 0.61
NEAT1-201ENST00000499732 PPM1GO15355 546 aaPredicted RBP18.88■□□□□ 0.61
NEAT1-201ENST00000499732 KDM2BQ8NHM5 1336 aa18.88■□□□□ 0.61
NEAT1-201ENST00000499732 PLEKHG3A1L390 1219 aa18.88■□□□□ 0.61
NEAT1-201ENST00000499732 TNNT2P45379 298 aaPredicted RBP18.88■□□□□ 0.61
NEAT1-201ENST00000499732 ZNF521Q96K83 1311 aa18.87■□□□□ 0.61
NEAT1-201ENST00000499732 NUTM2FA1L443 756 aa18.87■□□□□ 0.61
NEAT1-201ENST00000499732 PLIN1O60240 522 aa18.87■□□□□ 0.61
NEAT1-201ENST00000499732 ZNF692Q9BU19 519 aaPredicted RBP18.87■□□□□ 0.61
NEAT1-201ENST00000499732 FYB1O15117 783 aa18.86■□□□□ 0.61
NEAT1-201ENST00000499732 CENPQQ7L2Z9 268 aaPredicted RBP18.86■□□□□ 0.61
NEAT1-201ENST00000499732 RGS17Q9UGC6 210 aaPredicted RBP18.86■□□□□ 0.61
NEAT1-201ENST00000499732 RGPD8O14715 1765 aaPredicted RBP18.85■□□□□ 0.61
NEAT1-201ENST00000499732 GGNBP2Q9H3C7 697 aa18.85■□□□□ 0.61
NEAT1-201ENST00000499732 VIRMAQ69YN4 1812 aaKnown RBP18.84■□□□□ 0.61
NEAT1-201ENST00000499732 DUSP27Q5VZP5 1158 aa18.84■□□□□ 0.61
NEAT1-201ENST00000499732 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.84■□□□□ 0.61
NEAT1-201ENST00000499732 DCCP43146 1447 aa18.84■□□□□ 0.61
NEAT1-201ENST00000499732 MTHFSP49914 203 aa18.84■□□□□ 0.61
NEAT1-201ENST00000499732 EDC4Q6P2E9 1401 aaKnown RBP18.83■□□□□ 0.61
NEAT1-201ENST00000499732 SPATA31A6Q5VVP1 1343 aa18.82■□□□□ 0.6
NEAT1-201ENST00000499732 GOLGA2Q08379 1002 aa18.81■□□□□ 0.6
NEAT1-201ENST00000499732 ACEP12821 1306 aa18.81■□□□□ 0.6
NEAT1-201ENST00000499732 NEFMP07197 916 aa18.81■□□□□ 0.6
NEAT1-201ENST00000499732 NRKQ7Z2Y5 1582 aa18.8■□□□□ 0.6
NEAT1-201ENST00000499732 PHLPP1O60346 1717 aa18.8■□□□□ 0.6
NEAT1-201ENST00000499732 COL3A1P02461 1466 aaPredicted RBP18.79■□□□□ 0.6
NEAT1-201ENST00000499732 C20orf194Q5TEA3 1177 aa18.79■□□□□ 0.6
NEAT1-201ENST00000499732 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.78■□□□□ 0.6
NEAT1-201ENST00000499732 CCDC146Q8IYE0 955 aa18.78■□□□□ 0.6
NEAT1-201ENST00000499732 CFAP53Q96M91 514 aa18.78■□□□□ 0.6
NEAT1-201ENST00000499732 MEX3CQ5U5Q3 659 aaKnown RBP18.77■□□□□ 0.6
NEAT1-201ENST00000499732 POTEAQ6S8J7 498 aa18.77■□□□□ 0.6
NEAT1-201ENST00000499732 BRINP3Q76B58 766 aa18.77■□□□□ 0.6
NEAT1-201ENST00000499732 LAS1LQ9Y4W2 734 aaKnown RBP18.77■□□□□ 0.6
NEAT1-201ENST00000499732 USP6P35125 1406 aa18.77■□□□□ 0.6
NEAT1-201ENST00000499732 TRMT2AQ8IZ69 625 aaKnown RBP18.77■□□□□ 0.59
NEAT1-201ENST00000499732 NGDNQ8NEJ9 315 aaKnown RBP18.77■□□□□ 0.59
NEAT1-201ENST00000499732 AHDC1Q5TGY3 1603 aaPredicted RBP18.76■□□□□ 0.59
NEAT1-201ENST00000499732 SLFN5Q08AF3 891 aa18.76■□□□□ 0.59
NEAT1-201ENST00000499732 PMFBP1Q8TBY8 1022 aa18.76■□□□□ 0.59
NEAT1-201ENST00000499732 COL16A1Q07092 1604 aaPredicted RBP18.75■□□□□ 0.59
NEAT1-201ENST00000499732 FAM161AQ3B820 660 aa18.75■□□□□ 0.59
NEAT1-201ENST00000499732 NGEFQ8N5V2 710 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms