RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	TMEM134	Q9H6X4	195 aa		11.41	□□□□□ -0.58
GARNL3-222	ENST00000498801	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.41	□□□□□ -0.58
GARNL3-222	ENST00000498801	TRAPPC8	Q9Y2L5	1435 aa		11.41	□□□□□ -0.58
GARNL3-222	ENST00000498801	INO80	Q9ULG1	1556 aa	Predicted RBP	11.41	□□□□□ -0.58
GARNL3-222	ENST00000498801	RAPGEF3	O95398	923 aa		11.4	□□□□□ -0.58
GARNL3-222	ENST00000498801	SKIV2L	Q15477	1246 aa	Known RBP	11.4	□□□□□ -0.58
GARNL3-222	ENST00000498801	ARHGAP33	O14559	1287 aa		11.39	□□□□□ -0.59
GARNL3-222	ENST00000498801	CD46	P15529	392 aa		11.39	□□□□□ -0.59
GARNL3-222	ENST00000498801	EMP3	P54852	163 aa		11.39	□□□□□ -0.59
GARNL3-222	ENST00000498801	MYSM1	Q5VVJ2	828 aa		11.39	□□□□□ -0.59
GARNL3-222	ENST00000498801	FGD6	Q6ZV73	1430 aa		11.39	□□□□□ -0.59
GARNL3-222	ENST00000498801	KIAA1468	Q9P260	1216 aa		11.39	□□□□□ -0.59
GARNL3-222	ENST00000498801	CCDC141	Q6ZP82	1450 aa		11.38	□□□□□ -0.59
GARNL3-222	ENST00000498801	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.38	□□□□□ -0.59
GARNL3-222	ENST00000498801	YEATS2	Q9ULM3	1422 aa		11.38	□□□□□ -0.59
GARNL3-222	ENST00000498801	SULF1	Q8IWU6	871 aa		11.38	□□□□□ -0.59
GARNL3-222	ENST00000498801	SHANK2	Q9UPX8	1470 aa		11.38	□□□□□ -0.59
GARNL3-222	ENST00000498801	DIP2C	Q9Y2E4	1556 aa		11.37	□□□□□ -0.59
GARNL3-222	ENST00000498801	MARVELD3	Q96A59	401 aa		11.37	□□□□□ -0.59
GARNL3-222	ENST00000498801	TBC1D2	Q9BYX2	928 aa		11.37	□□□□□ -0.59
GARNL3-222	ENST00000498801	PLXNC1	O60486	1568 aa		11.37	□□□□□ -0.59
GARNL3-222	ENST00000498801	C9orf84	Q5VXU9	1444 aa		11.36	□□□□□ -0.59
GARNL3-222	ENST00000498801	AGL	P35573	1532 aa		11.36	□□□□□ -0.59
GARNL3-222	ENST00000498801	ATP7A	Q04656	1500 aa		11.36	□□□□□ -0.59
GARNL3-222	ENST00000498801	DDX11L8	A8MPP1	907 aa		11.36	□□□□□ -0.59
GARNL3-222	ENST00000498801	RSPH4A	Q5TD94	716 aa		11.36	□□□□□ -0.59
GARNL3-222	ENST00000498801	DMRTA1	Q5VZB9	504 aa		11.36	□□□□□ -0.59
GARNL3-222	ENST00000498801	AXIN2	Q9Y2T1	843 aa		11.36	□□□□□ -0.59
GARNL3-222	ENST00000498801	MAST1	Q9Y2H9	1570 aa		11.36	□□□□□ -0.59
GARNL3-222	ENST00000498801	PBX2	P40425	430 aa		11.35	□□□□□ -0.59
GARNL3-222	ENST00000498801	DIXDC1	Q155Q3	683 aa		11.35	□□□□□ -0.59
GARNL3-222	ENST00000498801	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.35	□□□□□ -0.59
GARNL3-222	ENST00000498801	SLC4A5	Q9BY07	1137 aa		11.35	□□□□□ -0.59
GARNL3-222	ENST00000498801	POLR3E	Q9NVU0	708 aa		11.35	□□□□□ -0.59
GARNL3-222	ENST00000498801	RABGEF1	Q9UJ41	708 aa		11.35	□□□□□ -0.59
GARNL3-222	ENST00000498801	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
GARNL3-222	ENST00000498801	ATP10A	O60312	1499 aa		11.35	□□□□□ -0.59
GARNL3-222	ENST00000498801	ABCA6	Q8N139	1617 aa		11.35	□□□□□ -0.59
GARNL3-222	ENST00000498801	KIDINS220	Q9ULH0	1771 aa		11.34	□□□□□ -0.59
GARNL3-222	ENST00000498801	CLK2	P49760	499 aa	Known RBP	11.34	□□□□□ -0.59
GARNL3-222	ENST00000498801	AFAP1	Q8N556	730 aa		11.34	□□□□□ -0.59
GARNL3-222	ENST00000498801	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.34	□□□□□ -0.59
GARNL3-222	ENST00000498801	PTPN23	Q9H3S7	1636 aa		11.34	□□□□□ -0.59
GARNL3-222	ENST00000498801	ZNF644	Q9H582	1327 aa	Predicted RBP	11.34	□□□□□ -0.59
GARNL3-222	ENST00000498801	FAM205C	A6NFA0	338 aa		11.33	□□□□□ -0.6
GARNL3-222	ENST00000498801	ZNF687	Q8N1G0	1237 aa		11.33	□□□□□ -0.6
GARNL3-222	ENST00000498801	SPIRE2	Q8WWL2	714 aa		11.33	□□□□□ -0.6
GARNL3-222	ENST00000498801	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
GARNL3-222	ENST00000498801	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.32	□□□□□ -0.6
GARNL3-222	ENST00000498801	DNMT1	P26358	1616 aa	Known RBP	11.31	□□□□□ -0.6
GARNL3-222	ENST00000498801	FLII	Q13045	1269 aa		11.31	□□□□□ -0.6
GARNL3-222	ENST00000498801	RRBP1	Q9P2E9	1410 aa	Known RBP	11.31	□□□□□ -0.6
GARNL3-222	ENST00000498801	SPAG9	O60271	1321 aa	Known RBP	11.31	□□□□□ -0.6
GARNL3-222	ENST00000498801	SIGLEC1	Q9BZZ2	1709 aa		11.3	□□□□□ -0.6
GARNL3-222	ENST00000498801	ABCC5	O15440	1437 aa		11.3	□□□□□ -0.6
GARNL3-222	ENST00000498801	VPS9D1	Q9Y2B5	631 aa		11.3	□□□□□ -0.6
GARNL3-222	ENST00000498801	ADGRL2	O95490	1459 aa		11.3	□□□□□ -0.6
GARNL3-222	ENST00000498801	CROCC2	H7BZ55	1655 aa		11.3	□□□□□ -0.6
GARNL3-222	ENST00000498801	FAM135A	Q9P2D6	1515 aa		11.3	□□□□□ -0.6
GARNL3-222	ENST00000498801	DAPK1	P53355	1430 aa		11.29	□□□□□ -0.6
GARNL3-222	ENST00000498801	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
GARNL3-222	ENST00000498801	SWT1	Q5T5J6	900 aa	Known RBP	11.29	□□□□□ -0.6
GARNL3-222	ENST00000498801	NUTM1	Q86Y26	1132 aa		11.29	□□□□□ -0.6
GARNL3-222	ENST00000498801	RDH13	Q8NBN7	331 aa		11.29	□□□□□ -0.6
GARNL3-222	ENST00000498801	LIMD1	Q9UGP4	676 aa		11.29	□□□□□ -0.6
GARNL3-222	ENST00000498801	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.29	□□□□□ -0.6
GARNL3-222	ENST00000498801	ADAMTSL3	P82987	1691 aa		11.29	□□□□□ -0.6
GARNL3-222	ENST00000498801	BCORL1	Q5H9F3	1711 aa		11.29	□□□□□ -0.6
GARNL3-222	ENST00000498801	A2M	P01023	1474 aa		11.28	□□□□□ -0.6
GARNL3-222	ENST00000498801	FAM163A	Q96GL9	167 aa	Predicted RBP	11.28	□□□□□ -0.6
GARNL3-222	ENST00000498801	HS3ST6	Q96QI5	342 aa		11.28	□□□□□ -0.6
GARNL3-222	ENST00000498801	ZMYND15	Q9H091	742 aa		11.28	□□□□□ -0.6
GARNL3-222	ENST00000498801	FAM98C	Q17RN3	349 aa	Known RBP	11.27	□□□□□ -0.61
GARNL3-222	ENST00000498801	ADGB	Q8N7X0	1667 aa		11.27	□□□□□ -0.61
GARNL3-222	ENST00000498801	POTEB3	A0JP26	581 aa		11.26	□□□□□ -0.61
GARNL3-222	ENST00000498801	POTEB	Q6S5H4	581 aa		11.26	□□□□□ -0.61
GARNL3-222	ENST00000498801	RIC3	Q7Z5B4	369 aa		11.26	□□□□□ -0.61
GARNL3-222	ENST00000498801	DHX29	Q7Z478	1369 aa	Known RBP	11.26	□□□□□ -0.61
GARNL3-222	ENST00000498801	MOXD2P	A6NHM9	499 aa		11.25	□□□□□ -0.61
GARNL3-222	ENST00000498801	SPTLC1	O15269	473 aa		11.25	□□□□□ -0.61
GARNL3-222	ENST00000498801	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.25	□□□□□ -0.61
GARNL3-222	ENST00000498801	ERBIN	Q96RT1	1412 aa		11.25	□□□□□ -0.61
GARNL3-222	ENST00000498801	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.24	□□□□□ -0.61
GARNL3-222	ENST00000498801	SLC10A3	P09131	477 aa		11.24	□□□□□ -0.61
GARNL3-222	ENST00000498801	MCM6	Q14566	821 aa		11.24	□□□□□ -0.61
GARNL3-222	ENST00000498801	NBPF3	Q9H094	633 aa		11.24	□□□□□ -0.61
GARNL3-222	ENST00000498801	ROCK1	Q13464	1354 aa		11.24	□□□□□ -0.61
GARNL3-222	ENST00000498801	DUOX2	Q9NRD8	1548 aa		11.24	□□□□□ -0.61
GARNL3-222	ENST00000498801	KDM4A	O75164	1064 aa		11.23	□□□□□ -0.61
GARNL3-222	ENST00000498801	GCGR	P47871	477 aa		11.23	□□□□□ -0.61
GARNL3-222	ENST00000498801	TUSC1	Q2TAM9	212 aa		11.23	□□□□□ -0.61
GARNL3-222	ENST00000498801	LCE2D	Q5TA82	110 aa	Predicted RBP	11.23	□□□□□ -0.61
GARNL3-222	ENST00000498801	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.23	□□□□□ -0.61
GARNL3-222	ENST00000498801	LAPTM4B	Q86VI4	370 aa		11.23	□□□□□ -0.61
GARNL3-222	ENST00000498801	NCOA1	Q15788	1441 aa		11.23	□□□□□ -0.61
GARNL3-222	ENST00000498801	TK2	O00142	265 aa		11.22	□□□□□ -0.61
GARNL3-222	ENST00000498801	TSPY4	P0CV99	314 aa		11.22	□□□□□ -0.61
GARNL3-222	ENST00000498801	TSPY10	P0CW01	314 aa		11.22	□□□□□ -0.61
GARNL3-222	ENST00000498801	RNF17	Q9BXT8	1623 aa	Known RBP	11.22	□□□□□ -0.61
GARNL3-222	ENST00000498801	MADD	Q8WXG6	1647 aa		11.21	□□□□□ -0.61

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