RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 TTC37Q6PGP7 1564 aa5.41□□□□□ -1.54
CLTC-209ENST00000498711 CNTLNQ9NXG0 1405 aa5.41□□□□□ -1.54
CLTC-209ENST00000498711 RBM27Q9P2N5 1060 aaKnown RBP5.41□□□□□ -1.54
CLTC-209ENST00000498711 MROH2AA6NES4 1674 aa5.41□□□□□ -1.54
CLTC-209ENST00000498711 AGLP35573 1532 aa5.41□□□□□ -1.54
CLTC-209ENST00000498711 PLEKHH2Q8IVE3 1493 aa5.4□□□□□ -1.54
CLTC-209ENST00000498711 SOCS7O14512 581 aa5.4□□□□□ -1.54
CLTC-209ENST00000498711 FAM69CQ0P6D2 419 aa5.4□□□□□ -1.54
CLTC-209ENST00000498711 MTMR14Q8NCE2 650 aa5.4□□□□□ -1.54
CLTC-209ENST00000498711 GDPD2Q9HCC8 539 aa5.4□□□□□ -1.54
CLTC-209ENST00000498711 MTUS2Q5JR59 1369 aa5.4□□□□□ -1.54
CLTC-209ENST00000498711 ANKRD30BQ9BXX2 1392 aa5.4□□□□□ -1.54
CLTC-209ENST00000498711 MBD5Q9P267 1494 aa5.4□□□□□ -1.55
CLTC-209ENST00000498711 WASHC2AQ641Q2 1341 aa5.4□□□□□ -1.55
CLTC-209ENST00000498711 TROQ12816 1431 aaPredicted RBP5.4□□□□□ -1.55
CLTC-209ENST00000498711 DNMT1P26358 1616 aaKnown RBP5.4□□□□□ -1.55
CLTC-209ENST00000498711 FBXO31Q5XUX0 539 aaPredicted RBP5.4□□□□□ -1.55
CLTC-209ENST00000498711 PRM3Q9NNZ6 103 aa5.4□□□□□ -1.55
CLTC-209ENST00000498711 LIMD1Q9UGP4 676 aa5.4□□□□□ -1.55
CLTC-209ENST00000498711 RPRD2Q5VT52 1461 aaKnown RBP5.4□□□□□ -1.55
CLTC-209ENST00000498711 ABCC1P33527 1531 aa5.39□□□□□ -1.55
CLTC-209ENST00000498711 ZFYVE16Q7Z3T8 1539 aa5.39□□□□□ -1.55
CLTC-209ENST00000498711 PDE4CQ08493 712 aa5.39□□□□□ -1.55
CLTC-209ENST00000498711 C3orf67Q6ZVT6 689 aa5.39□□□□□ -1.55
CLTC-209ENST00000498711 RIC3Q7Z5B4 369 aa5.39□□□□□ -1.55
CLTC-209ENST00000498711 CALR3Q96L12 384 aaKnown RBP5.39□□□□□ -1.55
CLTC-209ENST00000498711 HECW2Q9P2P5 1572 aa5.39□□□□□ -1.55
CLTC-209ENST00000498711 TUSC1Q2TAM9 212 aa5.39□□□□□ -1.55
CLTC-209ENST00000498711 TMCO4Q5TGY1 634 aa5.39□□□□□ -1.55
CLTC-209ENST00000498711 TTC13Q8NBP0 860 aa5.39□□□□□ -1.55
CLTC-209ENST00000498711 PLCH2O75038 1416 aa5.39□□□□□ -1.55
CLTC-209ENST00000498711 RNF123Q5XPI4 1314 aa5.39□□□□□ -1.55
CLTC-209ENST00000498711 FANCAO15360 1455 aa5.38□□□□□ -1.55
CLTC-209ENST00000498711 IRF5Q13568 498 aa5.38□□□□□ -1.55
CLTC-209ENST00000498711 POGZQ7Z3K3 1410 aa5.38□□□□□ -1.55
CLTC-209ENST00000498711 ADGRL1O94910 1474 aa5.38□□□□□ -1.55
CLTC-209ENST00000498711 CCDC7Q96M83 1385 aa5.38□□□□□ -1.55
CLTC-209ENST00000498711 HSPA5P11021 654 aaKnown RBP5.38□□□□□ -1.55
CLTC-209ENST00000498711 RBM46Q8TBY0 533 aaKnown RBP5.38□□□□□ -1.55
CLTC-209ENST00000498711 GLMNQ92990 594 aa5.38□□□□□ -1.55
CLTC-209ENST00000498711 CDC42BPAQ5VT25 1732 aa5.38□□□□□ -1.55
CLTC-209ENST00000498711 ADGRL2O95490 1459 aa5.38□□□□□ -1.55
CLTC-209ENST00000498711 ABL2P42684 1182 aa5.37□□□□□ -1.55
CLTC-209ENST00000498711 C6orf132Q5T0Z8 1188 aa5.37□□□□□ -1.55
CLTC-209ENST00000498711 SPIRE2Q8WWL2 714 aa5.37□□□□□ -1.55
CLTC-209ENST00000498711 COLQQ9Y215 455 aaPredicted RBP5.37□□□□□ -1.55
CLTC-209ENST00000498711 PCDHGA4Q9Y5G9 962 aa5.37□□□□□ -1.55
CLTC-209ENST00000498711 ARHGEF12Q9NZN5 1544 aa5.37□□□□□ -1.55
CLTC-209ENST00000498711 CDC42BPBQ9Y5S2 1711 aa5.37□□□□□ -1.55
CLTC-209ENST00000498711 INO80Q9ULG1 1556 aaPredicted RBP5.37□□□□□ -1.55
CLTC-209ENST00000498711 ABCC5O15440 1437 aa5.37□□□□□ -1.55
CLTC-209ENST00000498711 RGS22Q8NE09 1264 aa5.37□□□□□ -1.55
CLTC-209ENST00000498711 ZNF518AQ6AHZ1 1483 aa5.37□□□□□ -1.55
CLTC-209ENST00000498711 MLH3Q9UHC1 1453 aa5.37□□□□□ -1.55
CLTC-209ENST00000498711 ADGBQ8N7X0 1667 aa5.37□□□□□ -1.55
CLTC-209ENST00000498711 MAST1Q9Y2H9 1570 aa5.37□□□□□ -1.55
CLTC-209ENST00000498711 DAPK1P53355 1430 aa5.37□□□□□ -1.55
CLTC-209ENST00000498711 UHRF1BP1Q6BDS2 1440 aa5.36□□□□□ -1.55
CLTC-209ENST00000498711 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.36□□□□□ -1.55
CLTC-209ENST00000498711 PATL2C9JE40 543 aaKnown RBP5.36□□□□□ -1.55
CLTC-209ENST00000498711 NEFLP07196 543 aa5.36□□□□□ -1.55
CLTC-209ENST00000498711 MPHOSPH9Q99550 1183 aa5.36□□□□□ -1.55
CLTC-209ENST00000498711 ARID4BQ4LE39 1312 aaPredicted RBP5.36□□□□□ -1.55
CLTC-209ENST00000498711 PLXNC1O60486 1568 aa5.36□□□□□ -1.55
CLTC-209ENST00000498711 KIAA1107Q9UPP5 1409 aa5.36□□□□□ -1.55
CLTC-209ENST00000498711 PZPP20742 1482 aa5.36□□□□□ -1.55
CLTC-209ENST00000498711 COL17A1Q9UMD9 1497 aaPredicted RBP5.36□□□□□ -1.55
CLTC-209ENST00000498711 SPTLC1O15269 473 aa5.36□□□□□ -1.55
CLTC-209ENST00000498711 FOSBP53539 338 aa5.36□□□□□ -1.55
CLTC-209ENST00000498711 RSBN1LQ6PCB5 846 aaPredicted RBP5.36□□□□□ -1.55
CLTC-209ENST00000498711 GZF1Q9H116 711 aaPredicted RBP5.36□□□□□ -1.55
CLTC-209ENST00000498711 ARHGEF5Q12774 1597 aa5.36□□□□□ -1.55
CLTC-209ENST00000498711 ZBED9Q6R2W3 1325 aa5.36□□□□□ -1.55
CLTC-209ENST00000498711 C9orf84Q5VXU9 1444 aa5.35□□□□□ -1.55
CLTC-209ENST00000498711 KDM5DQ9BY66 1539 aa5.35□□□□□ -1.55
CLTC-209ENST00000498711 C11orf95C9JLR9 678 aaPredicted RBP5.35□□□□□ -1.55
CLTC-209ENST00000498711 PRKRIP1Q9H875 184 aaPredicted RBP5.35□□□□□ -1.55
CLTC-209ENST00000498711 PPP4R2Q9NY27 417 aa5.35□□□□□ -1.55
CLTC-209ENST00000498711 TBC1D2BQ9UPU7 963 aa5.35□□□□□ -1.55
CLTC-209ENST00000498711 DHX29Q7Z478 1369 aaKnown RBP5.35□□□□□ -1.55
CLTC-209ENST00000498711 FER1L4A9Z1Z3 1794 aa5.35□□□□□ -1.55
CLTC-209ENST00000498711 SMG6Q86US8 1419 aaKnown RBP5.35□□□□□ -1.55
CLTC-209ENST00000498711 DIP2CQ9Y2E4 1556 aa5.35□□□□□ -1.55
CLTC-209ENST00000498711 EIF2AK4Q9P2K8 1649 aaKnown RBP5.35□□□□□ -1.55
CLTC-209ENST00000498711 CROCC2H7BZ55 1655 aa5.35□□□□□ -1.55
CLTC-209ENST00000498711 POM121CA8CG34 1229 aa5.35□□□□□ -1.55
CLTC-209ENST00000498711 CD46P15529 392 aa5.35□□□□□ -1.55
CLTC-209ENST00000498711 PRSS12P56730 875 aa5.35□□□□□ -1.55
CLTC-209ENST00000498711 EIF4G2P78344 907 aaKnown RBP eCLIP5.35□□□□□ -1.55
CLTC-209ENST00000498711 SULF1Q8IWU6 871 aa5.35□□□□□ -1.55
CLTC-209ENST00000498711 ZDHHC16Q969W1 377 aa5.35□□□□□ -1.55
CLTC-209ENST00000498711 ZC3H13Q5T200 1668 aaKnown RBP5.35□□□□□ -1.55
CLTC-209ENST00000498711 PREX1Q8TCU6 1659 aa5.35□□□□□ -1.55
CLTC-209ENST00000498711 KDM4FA0A1W2PPD8 638 aa5.34□□□□□ -1.55
CLTC-209ENST00000498711 GJA5P36382 358 aa5.34□□□□□ -1.55
CLTC-209ENST00000498711 MFAP1P55081 439 aaKnown RBP5.34□□□□□ -1.55
CLTC-209ENST00000498711 NUTM1Q86Y26 1132 aa5.34□□□□□ -1.55
CLTC-209ENST00000498711 ZNF142P52746 1687 aaPredicted RBP5.34□□□□□ -1.55
CLTC-209ENST00000498711 CSPP1Q1MSJ5 1256 aa5.34□□□□□ -1.55
CLTC-209ENST00000498711 L3MBTL2Q969R5 705 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms