RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 GLI3P10071 1580 aa20.81■□□□□ 0.92
HDLBP-247ENST00000498595 PLCH1Q4KWH8 1693 aa20.81■□□□□ 0.92
HDLBP-247ENST00000498595 SEPT12Q8IYM1 358 aa20.81■□□□□ 0.92
HDLBP-247ENST00000498595 L3MBTL2Q969R5 705 aa20.81■□□□□ 0.92
HDLBP-247ENST00000498595 PRDM11Q9NQV5 511 aa20.81■□□□□ 0.92
HDLBP-247ENST00000498595 ALS2Q96Q42 1657 aa20.8■□□□□ 0.92
HDLBP-247ENST00000498595 NEUROD1Q13562 356 aa20.8■□□□□ 0.92
HDLBP-247ENST00000498595 ACEP12821 1306 aa20.79■□□□□ 0.92
HDLBP-247ENST00000498595 NBPF8Q3BBV2 869 aa20.78■□□□□ 0.92
HDLBP-247ENST00000498595 POLR3AO14802 1390 aaPredicted RBP20.77■□□□□ 0.92
HDLBP-247ENST00000498595 PLEKHG3A1L390 1219 aa20.77■□□□□ 0.92
HDLBP-247ENST00000498595 SF3B2Q13435 895 aaKnown RBP20.77■□□□□ 0.92
HDLBP-247ENST00000498595 SIN3AQ96ST3 1273 aa20.77■□□□□ 0.92
HDLBP-247ENST00000498595 COL14A1Q05707 1796 aaKnown RBP20.76■□□□□ 0.91
HDLBP-247ENST00000498595 ONECUT3O60422 494 aaPredicted RBP20.75■□□□□ 0.91
HDLBP-247ENST00000498595 KRT27Q7Z3Y8 459 aa20.75■□□□□ 0.91
HDLBP-247ENST00000498595 BLMP54132 1417 aaPredicted RBP20.74■□□□□ 0.91
HDLBP-247ENST00000498595 FAM98CQ17RN3 349 aaKnown RBP20.74■□□□□ 0.91
HDLBP-247ENST00000498595 NUTM2GQ5VZR2 741 aa20.74■□□□□ 0.91
HDLBP-247ENST00000498595 PPIP5K1Q6PFW1 1433 aa20.74■□□□□ 0.91
HDLBP-247ENST00000498595 ZRANB1Q9UGI0 708 aa20.74■□□□□ 0.91
HDLBP-247ENST00000498595 ABTB2Q8N961 1025 aa20.73■□□□□ 0.91
HDLBP-247ENST00000498595 CABP2Q9NPB3 220 aa20.73■□□□□ 0.91
HDLBP-247ENST00000498595 ROCK2O75116 1388 aaKnown RBP20.72■□□□□ 0.91
HDLBP-247ENST00000498595 KIAA0232Q92628 1395 aa20.72■□□□□ 0.91
HDLBP-247ENST00000498595 TOPAZ1Q8N9V7 1692 aa20.72■□□□□ 0.91
HDLBP-247ENST00000498595 ZC3H6P61129 1189 aaKnown RBP20.71■□□□□ 0.91
HDLBP-247ENST00000498595 EVC2Q86UK5 1308 aa20.71■□□□□ 0.91
HDLBP-247ENST00000498595 SPATA31A5Q5VU36 1347 aa20.7■□□□□ 0.9
HDLBP-247ENST00000498595 SPATA31A7Q8IWB4 1347 aa20.7■□□□□ 0.9
HDLBP-247ENST00000498595 BRD4O60885 1362 aaPredicted RBP20.7■□□□□ 0.9
HDLBP-247ENST00000498595 NRAPQ86VF7 1730 aa20.7■□□□□ 0.9
HDLBP-247ENST00000498595 CHRNA2Q15822 529 aa20.69■□□□□ 0.9
HDLBP-247ENST00000498595 NLRP13Q86W25 1043 aa20.69■□□□□ 0.9
HDLBP-247ENST00000498595 QRICH2Q9H0J4 1663 aa20.69■□□□□ 0.9
HDLBP-247ENST00000498595 EVA1CP58658 441 aa20.68■□□□□ 0.9
HDLBP-247ENST00000498595 STRN4Q9NRL3 753 aa20.68■□□□□ 0.9
HDLBP-247ENST00000498595 CRYBG1Q9Y4K1 1723 aa20.67■□□□□ 0.9
HDLBP-247ENST00000498595 CABP1Q9NZU7 370 aa20.67■□□□□ 0.9
HDLBP-247ENST00000498595 EP400Q96L91 3159 aa20.66■□□□□ 0.9
HDLBP-247ENST00000498595 TRPM1Q7Z4N2 1603 aa20.66■□□□□ 0.9
HDLBP-247ENST00000498595 PHRF1Q9P1Y6 1649 aaKnown RBP20.66■□□□□ 0.9
HDLBP-247ENST00000498595 BRWD3Q6RI45 1802 aa20.64■□□□□ 0.9
HDLBP-247ENST00000498595 USP19O94966 1318 aa20.63■□□□□ 0.89
HDLBP-247ENST00000498595 CPDO75976 1380 aa20.62■□□□□ 0.89
HDLBP-247ENST00000498595 SPATA31A1Q5TZJ5 1347 aa20.62■□□□□ 0.89
HDLBP-247ENST00000498595 GCP02774 474 aa20.62■□□□□ 0.89
HDLBP-247ENST00000498595 BAG6P46379 1132 aa20.62■□□□□ 0.89
HDLBP-247ENST00000498595 NLRP6P59044 892 aa20.62■□□□□ 0.89
HDLBP-247ENST00000498595 DEFB132Q7Z7B7 95 aa20.62■□□□□ 0.89
HDLBP-247ENST00000498595 USP6P35125 1406 aa20.61■□□□□ 0.89
HDLBP-247ENST00000498595 TONSLQ96HA7 1378 aa20.61■□□□□ 0.89
HDLBP-247ENST00000498595 USP35Q9P2H5 1018 aa20.61■□□□□ 0.89
HDLBP-247ENST00000498595 NRKQ7Z2Y5 1582 aa20.6■□□□□ 0.89
HDLBP-247ENST00000498595 ZNF692Q9BU19 519 aaPredicted RBP20.6■□□□□ 0.89
HDLBP-247ENST00000498595 ZBTB7CA1YPR0 619 aa20.59■□□□□ 0.89
HDLBP-247ENST00000498595 CARD11Q9BXL7 1154 aa20.59■□□□□ 0.89
HDLBP-247ENST00000498595 SSH2Q76I76 1423 aa20.59■□□□□ 0.89
HDLBP-247ENST00000498595 PDE3BQ13370 1112 aa20.56■□□□□ 0.88
HDLBP-247ENST00000498595 BARGINQ6ZT62 677 aa20.56■□□□□ 0.88
HDLBP-247ENST00000498595 THSD7AQ9UPZ6 1657 aa20.55■□□□□ 0.88
HDLBP-247ENST00000498595 FAM182BQ5T319 152 aa20.55■□□□□ 0.88
HDLBP-247ENST00000498595 LARP1Q6PKG0 1096 aaKnown RBP20.55■□□□□ 0.88
HDLBP-247ENST00000498595 FAM196AQ6ZSG2 479 aa20.55■□□□□ 0.88
HDLBP-247ENST00000498595 TCP11L2Q8N4U5 519 aa20.55■□□□□ 0.88
HDLBP-247ENST00000498595 TRIM26Q12899 539 aaPredicted RBP20.54■□□□□ 0.88
HDLBP-247ENST00000498595 THRAP3Q9Y2W1 955 aaKnown RBP20.54■□□□□ 0.88
HDLBP-247ENST00000498595 CAMTA1Q9Y6Y1 1673 aa20.54■□□□□ 0.88
HDLBP-247ENST00000498595 TTC21AQ8NDW8 1320 aa20.53■□□□□ 0.88
HDLBP-247ENST00000498595 TTC21BQ7Z4L5 1316 aa20.53■□□□□ 0.88
HDLBP-247ENST00000498595 KTN1Q86UP2 1357 aaKnown RBP20.52■□□□□ 0.88
HDLBP-247ENST00000498595 SBNO2Q9Y2G9 1366 aa20.52■□□□□ 0.88
HDLBP-247ENST00000498595 KCNH5Q8NCM2 988 aa20.52■□□□□ 0.88
HDLBP-247ENST00000498595 AATKQ6ZMQ8 1374 aa20.51■□□□□ 0.87
HDLBP-247ENST00000498595 LMO7Q8WWI1 1683 aa20.51■□□□□ 0.87
HDLBP-247ENST00000498595 COL5A2P05997 1499 aaPredicted RBP20.5■□□□□ 0.87
HDLBP-247ENST00000498595 SLIT3O75094 1523 aa20.5■□□□□ 0.87
HDLBP-247ENST00000498595 EN1Q05925 392 aaPredicted RBP20.5■□□□□ 0.87
HDLBP-247ENST00000498595 RGPD1P0DJD0 1748 aa20.5■□□□□ 0.87
HDLBP-247ENST00000498595 TMC1Q8TDI8 760 aa20.49■□□□□ 0.87
HDLBP-247ENST00000498595 CRB1P82279 1406 aa20.49■□□□□ 0.87
HDLBP-247ENST00000498595 SOX12O15370 315 aa20.48■□□□□ 0.87
HDLBP-247ENST00000498595 TOM1L2Q6ZVM7 507 aa20.48■□□□□ 0.87
HDLBP-247ENST00000498595 TRIM37O94972 964 aa20.47■□□□□ 0.87
HDLBP-247ENST00000498595 HDGFL2Q7Z4V5 671 aaPredicted RBP20.47■□□□□ 0.87
HDLBP-247ENST00000498595 PIK3C2AO00443 1686 aa20.47■□□□□ 0.87
HDLBP-247ENST00000498595 CPSF1Q10570 1443 aaKnown RBP20.46■□□□□ 0.87
HDLBP-247ENST00000498595 C11orf95C9JLR9 678 aaPredicted RBP20.46■□□□□ 0.87
HDLBP-247ENST00000498595 CSB-PGBD3P0DP91 1061 aa20.45■□□□□ 0.86
HDLBP-247ENST00000498595 DISP2A7MBM2 1401 aa20.44■□□□□ 0.86
HDLBP-247ENST00000498595 SLC24A1O60721 1099 aa20.44■□□□□ 0.86
HDLBP-247ENST00000498595 APBA3O96018 575 aa20.44■□□□□ 0.86
HDLBP-247ENST00000498595 ARHGEF25Q86VW2 580 aa20.44■□□□□ 0.86
HDLBP-247ENST00000498595 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.44■□□□□ 0.86
HDLBP-247ENST00000498595 TERF2IPQ9NYB0 399 aa20.44■□□□□ 0.86
HDLBP-247ENST00000498595 WDR17Q8IZU2 1322 aa20.43■□□□□ 0.86
HDLBP-247ENST00000498595 AKAP12Q02952 1782 aa20.43■□□□□ 0.86
HDLBP-247ENST00000498595 PSDA5PKW4 1024 aaPredicted RBP20.42■□□□□ 0.86
HDLBP-247ENST00000498595 PARD3Q8TEW0 1356 aa20.42■□□□□ 0.86
HDLBP-247ENST00000498595 EZH2Q15910 746 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms