RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 YTHDC1Q96MU7 727 aaKnown RBP9.67□□□□□ -0.86
PDCD4-211ENST00000498367 CALRP27797 417 aaKnown RBP9.66□□□□□ -0.86
PDCD4-211ENST00000498367 PADI6Q6TGC4 694 aa9.66□□□□□ -0.86
PDCD4-211ENST00000498367 NOP9Q86U38 636 aaKnown RBP9.66□□□□□ -0.86
PDCD4-211ENST00000498367 APLP1P51693 650 aa9.65□□□□□ -0.86
PDCD4-211ENST00000498367 WDR78Q5VTH9 848 aa9.65□□□□□ -0.86
PDCD4-211ENST00000498367 SGSM3Q96HU1 749 aa9.65□□□□□ -0.86
PDCD4-211ENST00000498367 IL21Q9HBE4 155 aa9.65□□□□□ -0.86
PDCD4-211ENST00000498367 TMA7Q9Y2S6 64 aaKnown RBP9.65□□□□□ -0.86
PDCD4-211ENST00000498367 CALR3Q96L12 384 aaKnown RBP9.64□□□□□ -0.87
PDCD4-211ENST00000498367 SLC52A1Q9NWF4 448 aa9.64□□□□□ -0.87
PDCD4-211ENST00000498367 LIG1P18858 919 aa9.63□□□□□ -0.87
PDCD4-211ENST00000498367 ARID4AP29374 1257 aaPredicted RBP9.63□□□□□ -0.87
PDCD4-211ENST00000498367 GIMAP6Q6P9H5 292 aa9.63□□□□□ -0.87
PDCD4-211ENST00000498367 NME8Q8N427 588 aa9.63□□□□□ -0.87
PDCD4-211ENST00000498367 EYA1Q99502 592 aa9.63□□□□□ -0.87
PDCD4-211ENST00000498367 HSP90AB2PQ58FF8 381 aa9.62□□□□□ -0.87
PDCD4-211ENST00000498367 TXNDC2Q86VQ3 553 aa9.62□□□□□ -0.87
PDCD4-211ENST00000498367 ANP32CO43423 234 aa9.61□□□□□ -0.87
PDCD4-211ENST00000498367 IGBP1P78318 339 aa9.61□□□□□ -0.87
PDCD4-211ENST00000498367 FOXD4L6Q3SYB3 417 aaPredicted RBP9.61□□□□□ -0.87
PDCD4-211ENST00000498367 SWT1Q5T5J6 900 aaKnown RBP9.61□□□□□ -0.87
PDCD4-211ENST00000498367 FOXD4L3Q6VB84 417 aaPredicted RBP9.61□□□□□ -0.87
PDCD4-211ENST00000498367 FAM43BQ6ZT52 329 aaPredicted RBP9.61□□□□□ -0.87
PDCD4-211ENST00000498367 FAM9BQ8IZU0 186 aa9.61□□□□□ -0.87
PDCD4-211ENST00000498367 ZNF516Q92618 1163 aa9.61□□□□□ -0.87
PDCD4-211ENST00000498367 LCE2BO14633 110 aa9.6□□□□□ -0.87
PDCD4-211ENST00000498367 IBSPP21815 317 aaPredicted RBP9.6□□□□□ -0.87
PDCD4-211ENST00000498367 MLLT3P42568 568 aaPredicted RBP9.6□□□□□ -0.87
PDCD4-211ENST00000498367 NAALADL2Q58DX5 795 aa9.6□□□□□ -0.87
PDCD4-211ENST00000498367 PPP1R18Q6NYC8 613 aa9.6□□□□□ -0.87
PDCD4-211ENST00000498367 PPARGC1BQ86YN6 1023 aaKnown RBP9.6□□□□□ -0.87
PDCD4-211ENST00000498367 IPO4Q8TEX9 1081 aaKnown RBP9.6□□□□□ -0.87
PDCD4-211ENST00000498367 CREB3O43889 395 aa9.59□□□□□ -0.87
PDCD4-211ENST00000498367 SH3BP5O60239 455 aa9.59□□□□□ -0.87
PDCD4-211ENST00000498367 ZNF16P17020 682 aaPredicted RBP9.59□□□□□ -0.87
PDCD4-211ENST00000498367 B4GALNT3Q6L9W6 998 aa9.59□□□□□ -0.87
PDCD4-211ENST00000498367 GNEQ9Y223 722 aaKnown RBP9.59□□□□□ -0.87
PDCD4-211ENST00000498367 COG6Q9Y2V7 657 aa9.59□□□□□ -0.87
PDCD4-211ENST00000498367 hCG_2014768A0A024R1R8 64 aa9.58□□□□□ -0.88
PDCD4-211ENST00000498367 SPDYE5A6NIY4 337 aa9.58□□□□□ -0.88
PDCD4-211ENST00000498367 RNF40O75150 1001 aa9.58□□□□□ -0.88
PDCD4-211ENST00000498367 PEX14O75381 377 aa9.58□□□□□ -0.88
PDCD4-211ENST00000498367 HDGFP51858 240 aaKnown RBP9.58□□□□□ -0.88
PDCD4-211ENST00000498367 LAPTM4AQ15012 233 aa9.58□□□□□ -0.88
PDCD4-211ENST00000498367 SKIV2LQ15477 1246 aaKnown RBP9.58□□□□□ -0.88
PDCD4-211ENST00000498367 AMHR2Q16671 573 aa9.58□□□□□ -0.88
PDCD4-211ENST00000498367 KRBA2Q6ZNG9 492 aa9.58□□□□□ -0.88
PDCD4-211ENST00000498367 SLF2Q8IX21 1173 aa9.58□□□□□ -0.88
PDCD4-211ENST00000498367 NAP1L2Q9ULW6 460 aaPredicted RBP9.58□□□□□ -0.88
PDCD4-211ENST00000498367 MINK1Q8N4C8 1332 aaPredicted RBP9.57□□□□□ -0.88
PDCD4-211ENST00000498367 ZNF662Q6ZS27 426 aa9.57□□□□□ -0.88
PDCD4-211ENST00000498367 DPH6Q7L8W6 267 aa9.57□□□□□ -0.88
PDCD4-211ENST00000498367 CCAR1Q8IX12 1150 aaKnown RBP9.57□□□□□ -0.88
PDCD4-211ENST00000498367 BCL2L13Q9BXK5 485 aa9.57□□□□□ -0.88
PDCD4-211ENST00000498367 PRKD2Q9BZL6 878 aa9.57□□□□□ -0.88
PDCD4-211ENST00000498367 VRTNQ9H8Y1 702 aa9.57□□□□□ -0.88
PDCD4-211ENST00000498367 PTGDRQ13258 359 aa9.56□□□□□ -0.88
PDCD4-211ENST00000498367 ZFYVE27Q5T4F4 411 aa9.56□□□□□ -0.88
PDCD4-211ENST00000498367 RBM46Q8TBY0 533 aaKnown RBP9.56□□□□□ -0.88
PDCD4-211ENST00000498367 MTA3Q9BTC8 594 aa9.56□□□□□ -0.88
PDCD4-211ENST00000498367 CDCA7Q9BWT1 371 aaPredicted RBP9.56□□□□□ -0.88
PDCD4-211ENST00000498367 JADE2Q9NQC1 790 aa9.56□□□□□ -0.88
PDCD4-211ENST00000498367 V9GY48 417 aaPredicted RBP9.56□□□□□ -0.88
PDCD4-211ENST00000498367 VAMP1P23763 118 aa9.55□□□□□ -0.88
PDCD4-211ENST00000498367 PARP9Q8IXQ6 854 aa9.55□□□□□ -0.88
PDCD4-211ENST00000498367 NKX2-3Q8TAU0 364 aa9.55□□□□□ -0.88
PDCD4-211ENST00000498367 SECISBP2LQ93073 1101 aaKnown RBP9.55□□□□□ -0.88
PDCD4-211ENST00000498367 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.55□□□□□ -0.88
PDCD4-211ENST00000498367 CCDC194A0A1B0GVG4 234 aa9.54□□□□□ -0.88
PDCD4-211ENST00000498367 FAM193AP78312 1265 aa9.54□□□□□ -0.88
PDCD4-211ENST00000498367 MYBPC2Q14324 1141 aa9.54□□□□□ -0.88
PDCD4-211ENST00000498367 TSHZ1Q6ZSZ6 1077 aa9.54□□□□□ -0.88
PDCD4-211ENST00000498367 FTSJ3Q8IY81 847 aaKnown RBP9.54□□□□□ -0.88
PDCD4-211ENST00000498367 MAP4K4O95819 1239 aaPredicted RBP9.53□□□□□ -0.88
PDCD4-211ENST00000498367 HSP90AA1P07900 732 aaKnown RBP9.53□□□□□ -0.88
PDCD4-211ENST00000498367 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.53□□□□□ -0.88
PDCD4-211ENST00000498367 GFRA3O60609 400 aa9.52□□□□□ -0.89
PDCD4-211ENST00000498367 SH3D19Q5HYK7 790 aa9.52□□□□□ -0.89
PDCD4-211ENST00000498367 ZCRB1Q8TBF4 217 aaKnown RBP9.52□□□□□ -0.89
PDCD4-211ENST00000498367 SBNO2Q9Y2G9 1366 aa9.51□□□□□ -0.89
PDCD4-211ENST00000498367 EXOC5O00471 708 aa9.51□□□□□ -0.89
PDCD4-211ENST00000498367 PPFIA4O75335 1185 aa9.51□□□□□ -0.89
PDCD4-211ENST00000498367 COPS2P61201 443 aa9.51□□□□□ -0.89
PDCD4-211ENST00000498367 PTPROQ16827 1216 aa9.51□□□□□ -0.89
PDCD4-211ENST00000498367 PNISRQ8TF01 805 aaKnown RBP9.51□□□□□ -0.89
PDCD4-211ENST00000498367 ADGRG1Q9Y653 693 aa9.51□□□□□ -0.89
PDCD4-211ENST00000498367 TLDC2A0PJX2 215 aa9.5□□□□□ -0.89
PDCD4-211ENST00000498367 NRG2O14511 850 aaPredicted RBP9.5□□□□□ -0.89
PDCD4-211ENST00000498367 ZPR1O75312 459 aa9.5□□□□□ -0.89
PDCD4-211ENST00000498367 RINLQ6ZS11 566 aa9.5□□□□□ -0.89
PDCD4-211ENST00000498367 SPOCK3Q9BQ16 436 aa9.5□□□□□ -0.89
PDCD4-211ENST00000498367 PCGF6Q9BYE7 350 aa9.5□□□□□ -0.89
PDCD4-211ENST00000498367 CUEDC1Q9NWM3 386 aaPredicted RBP9.5□□□□□ -0.89
PDCD4-211ENST00000498367 KLHL42Q9P2K6 505 aa9.5□□□□□ -0.89
PDCD4-211ENST00000498367 COMMD10Q9Y6G5 202 aa9.5□□□□□ -0.89
PDCD4-211ENST00000498367 CLGNO14967 610 aa9.49□□□□□ -0.89
PDCD4-211ENST00000498367 DNAJB2P25686 324 aa9.49□□□□□ -0.89
PDCD4-211ENST00000498367 TRAF7Q6Q0C0 670 aa9.49□□□□□ -0.89
PDCD4-211ENST00000498367 GIPC2Q8TF65 315 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms