RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 SOCS7O14512 581 aa22.19■■□□□ 1.14
SSBP1-214ENST00000498107 COL22A1Q8NFW1 1626 aaPredicted RBP22.19■■□□□ 1.14
SSBP1-214ENST00000498107 POLR3GLQ9BT43 218 aa22.17■■□□□ 1.14
SSBP1-214ENST00000498107 ALS2Q96Q42 1657 aa22.17■■□□□ 1.14
SSBP1-214ENST00000498107 CD163L1Q9NR16 1453 aa22.15■■□□□ 1.14
SSBP1-214ENST00000498107 ANKRD36BQ8N2N9 1353 aa22.15■■□□□ 1.14
SSBP1-214ENST00000498107 MON2Q7Z3U7 1717 aa22.15■■□□□ 1.14
SSBP1-214ENST00000498107 TTC21AQ8NDW8 1320 aa22.15■■□□□ 1.14
SSBP1-214ENST00000498107 A0A1W2PP64 1363 aa22.14■■□□□ 1.14
SSBP1-214ENST00000498107 ABTB2Q8N961 1025 aa22.14■■□□□ 1.13
SSBP1-214ENST00000498107 SSH2Q76I76 1423 aa22.14■■□□□ 1.13
SSBP1-214ENST00000498107 MED1Q15648 1581 aaPredicted RBP22.13■■□□□ 1.13
SSBP1-214ENST00000498107 TTC21BQ7Z4L5 1316 aa22.13■■□□□ 1.13
SSBP1-214ENST00000498107 NUTM2BA6NNL0 878 aaPredicted RBP22.13■■□□□ 1.13
SSBP1-214ENST00000498107 NUTM2EB1AL46 878 aaPredicted RBP22.13■■□□□ 1.13
SSBP1-214ENST00000498107 NUTM2AQ8IVF1 878 aaPredicted RBP22.13■■□□□ 1.13
SSBP1-214ENST00000498107 EDC4Q6P2E9 1401 aaKnown RBP22.13■■□□□ 1.13
SSBP1-214ENST00000498107 HAP1P54257 671 aaPredicted RBP22.12■■□□□ 1.13
SSBP1-214ENST00000498107 MYOM1P52179 1685 aa22.11■■□□□ 1.13
SSBP1-214ENST00000498107 C11orf95C9JLR9 678 aaPredicted RBP22.11■■□□□ 1.13
SSBP1-214ENST00000498107 MEX3CQ5U5Q3 659 aaKnown RBP22.11■■□□□ 1.13
SSBP1-214ENST00000498107 NLRP13Q86W25 1043 aa22.11■■□□□ 1.13
SSBP1-214ENST00000498107 KIF7Q2M1P5 1343 aa22.1■■□□□ 1.13
SSBP1-214ENST00000498107 NRKQ7Z2Y5 1582 aa22.1■■□□□ 1.13
SSBP1-214ENST00000498107 NLRP6P59044 892 aa22.08■■□□□ 1.13
SSBP1-214ENST00000498107 LRP6O75581 1613 aa22.08■■□□□ 1.13
SSBP1-214ENST00000498107 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.07■■□□□ 1.12
SSBP1-214ENST00000498107 NUTM2GQ5VZR2 741 aa22.06■■□□□ 1.12
SSBP1-214ENST00000498107 CCDC7Q96M83 1385 aa22.06■■□□□ 1.12
SSBP1-214ENST00000498107 ADAMTS2O95450 1211 aa22.05■■□□□ 1.12
SSBP1-214ENST00000498107 CABLES1Q8TDN4 633 aa22.05■■□□□ 1.12
SSBP1-214ENST00000498107 PHF23Q9BUL5 403 aaPredicted RBP22.05■■□□□ 1.12
SSBP1-214ENST00000498107 PIK3C2AO00443 1686 aa22.04■■□□□ 1.12
SSBP1-214ENST00000498107 ABCA3Q99758 1704 aa22.04■■□□□ 1.12
SSBP1-214ENST00000498107 PLEKHG5O94827 1062 aa22.04■■□□□ 1.12
SSBP1-214ENST00000498107 USP19O94966 1318 aa22.04■■□□□ 1.12
SSBP1-214ENST00000498107 WASHC2AQ641Q2 1341 aa22.03■■□□□ 1.12
SSBP1-214ENST00000498107 USP31Q70CQ4 1352 aa22.02■■□□□ 1.12
SSBP1-214ENST00000498107 MARF1Q9Y4F3 1742 aaKnown RBP22.02■■□□□ 1.12
SSBP1-214ENST00000498107 CRYBG1Q9Y4K1 1723 aa22.02■■□□□ 1.12
SSBP1-214ENST00000498107 NME9Q86XW9 330 aa22.01■■□□□ 1.11
SSBP1-214ENST00000498107 KCNH5Q8NCM2 988 aa22.01■■□□□ 1.11
SSBP1-214ENST00000498107 C8orf37Q96NL8 207 aa22.01■■□□□ 1.11
SSBP1-214ENST00000498107 PANK3Q9H999 370 aa22.01■■□□□ 1.11
SSBP1-214ENST00000498107 PHRF1Q9P1Y6 1649 aaKnown RBP22.01■■□□□ 1.11
SSBP1-214ENST00000498107 NSD3Q9BZ95 1437 aa22■■□□□ 1.11
SSBP1-214ENST00000498107 NGLY1Q96IV0 654 aa22■■□□□ 1.11
SSBP1-214ENST00000498107 USP54Q70EL1 1684 aa21.99■■□□□ 1.11
SSBP1-214ENST00000498107 GCP02774 474 aa21.99■■□□□ 1.11
SSBP1-214ENST00000498107 CARD14Q9BXL6 1004 aa21.99■■□□□ 1.11
SSBP1-214ENST00000498107 CGNL1Q0VF96 1302 aa21.99■■□□□ 1.11
SSBP1-214ENST00000498107 SLIT3O75094 1523 aa21.98■■□□□ 1.11
SSBP1-214ENST00000498107 COG3Q96JB2 828 aa21.98■■□□□ 1.11
SSBP1-214ENST00000498107 ZNF772Q68DY9 489 aaPredicted RBP21.96■■□□□ 1.11
SSBP1-214ENST00000498107 KNSTRNQ9Y448 316 aa21.96■■□□□ 1.11
SSBP1-214ENST00000498107 KIF20BQ96Q89 1820 aa21.95■■□□□ 1.1
SSBP1-214ENST00000498107 FYB1O15117 783 aa21.95■■□□□ 1.1
SSBP1-214ENST00000498107 PRDM11Q9NQV5 511 aa21.95■■□□□ 1.1
SSBP1-214ENST00000498107 CPDO75976 1380 aa21.95■■□□□ 1.1
SSBP1-214ENST00000498107 OVOS2A0A0J9YW53 1432 aa21.95■■□□□ 1.1
SSBP1-214ENST00000498107 OVOS2Q6IE36 1432 aa21.95■■□□□ 1.1
SSBP1-214ENST00000498107 FNBP4Q8N3X1 1017 aaPredicted RBP21.94■■□□□ 1.1
SSBP1-214ENST00000498107 AFF2P51816 1311 aa21.94■■□□□ 1.1
SSBP1-214ENST00000498107 ZC3H6P61129 1189 aaKnown RBP21.93■■□□□ 1.1
SSBP1-214ENST00000498107 COL14A1Q05707 1796 aaKnown RBP21.93■■□□□ 1.1
SSBP1-214ENST00000498107 KIAA0232Q92628 1395 aa21.93■■□□□ 1.1
SSBP1-214ENST00000498107 ZRANB1Q9UGI0 708 aa21.93■■□□□ 1.1
SSBP1-214ENST00000498107 FAM83GA6ND36 823 aa21.92■■□□□ 1.1
SSBP1-214ENST00000498107 GGNBP2Q9H3C7 697 aa21.92■■□□□ 1.1
SSBP1-214ENST00000498107 NSD2O96028 1365 aa21.91■■□□□ 1.1
SSBP1-214ENST00000498107 USP21Q9UK80 565 aa21.91■■□□□ 1.1
SSBP1-214ENST00000498107 SLIT2O94813 1529 aa21.9■■□□□ 1.1
SSBP1-214ENST00000498107 NWD2Q9ULI1 1742 aa21.89■■□□□ 1.1
SSBP1-214ENST00000498107 SOX12O15370 315 aa21.89■■□□□ 1.09
SSBP1-214ENST00000498107 UNC5CLQ8IV45 518 aa21.88■■□□□ 1.09
SSBP1-214ENST00000498107 NFAT5O94916 1531 aa21.88■■□□□ 1.09
SSBP1-214ENST00000498107 PLCH1Q4KWH8 1693 aa21.88■■□□□ 1.09
SSBP1-214ENST00000498107 ARHGEF25Q86VW2 580 aa21.87■■□□□ 1.09
SSBP1-214ENST00000498107 AATKQ6ZMQ8 1374 aa21.87■■□□□ 1.09
SSBP1-214ENST00000498107 ZBTB7CA1YPR0 619 aa21.86■■□□□ 1.09
SSBP1-214ENST00000498107 CHRNA2Q15822 529 aa21.86■■□□□ 1.09
SSBP1-214ENST00000498107 BTG4Q9NY30 223 aa21.86■■□□□ 1.09
SSBP1-214ENST00000498107 RGS17Q9UGC6 210 aaPredicted RBP21.86■■□□□ 1.09
SSBP1-214ENST00000498107 TRPC5Q9UL62 973 aaPredicted RBP21.86■■□□□ 1.09
SSBP1-214ENST00000498107 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.86■■□□□ 1.09
SSBP1-214ENST00000498107 BCL9LQ86UU0 1499 aa21.85■■□□□ 1.09
SSBP1-214ENST00000498107 PER1O15534 1290 aaPredicted RBP21.85■■□□□ 1.09
SSBP1-214ENST00000498107 ANKRD26Q9UPS8 1709 aa21.85■■□□□ 1.09
SSBP1-214ENST00000498107 QTRT2Q9H974 415 aaKnown RBP21.84■■□□□ 1.09
SSBP1-214ENST00000498107 ABCC6O95255 1503 aa21.84■■□□□ 1.09
SSBP1-214ENST00000498107 AMER1Q5JTC6 1135 aaPredicted RBP21.82■■□□□ 1.08
SSBP1-214ENST00000498107 NPC1L1Q9UHC9 1359 aa21.82■■□□□ 1.08
SSBP1-214ENST00000498107 ZNF316A6NFI3 1004 aaPredicted RBP21.81■■□□□ 1.08
SSBP1-214ENST00000498107 EVA1CP58658 441 aa21.81■■□□□ 1.08
SSBP1-214ENST00000498107 MORC1Q86VD1 984 aa21.81■■□□□ 1.08
SSBP1-214ENST00000498107 LMO7Q8WWI1 1683 aa21.81■■□□□ 1.08
SSBP1-214ENST00000498107 LTN1O94822 1766 aa21.81■■□□□ 1.08
SSBP1-214ENST00000498107 ATRNO75882 1429 aa21.8■■□□□ 1.08
SSBP1-214ENST00000498107 VPS72Q15906 364 aa21.8■■□□□ 1.08
SSBP1-214ENST00000498107 AMPHP49418 695 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms