RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 LRCH3Q96II8 777 aa9.19□□□□□ -0.94
TMEM39A-212ENST00000497993 GPCPD1Q9NPB8 672 aa9.19□□□□□ -0.94
TMEM39A-212ENST00000497993 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.19□□□□□ -0.94
TMEM39A-212ENST00000497993 FANCAO15360 1455 aa9.19□□□□□ -0.94
TMEM39A-212ENST00000497993 ITSN2Q9NZM3 1697 aa9.19□□□□□ -0.94
TMEM39A-212ENST00000497993 SOWAHBA6NEL2 793 aa9.18□□□□□ -0.94
TMEM39A-212ENST00000497993 MDM2Q00987 491 aaPredicted RBP9.18□□□□□ -0.94
TMEM39A-212ENST00000497993 MAP3K1Q13233 1512 aa9.18□□□□□ -0.94
TMEM39A-212ENST00000497993 SLF2Q8IX21 1173 aa9.18□□□□□ -0.94
TMEM39A-212ENST00000497993 NECTIN2Q92692 538 aa9.18□□□□□ -0.94
TMEM39A-212ENST00000497993 TMUB1Q9BVT8 246 aa9.18□□□□□ -0.94
TMEM39A-212ENST00000497993 ADAMTSL3P82987 1691 aa9.17□□□□□ -0.94
TMEM39A-212ENST00000497993 REREQ9P2R6 1566 aa9.17□□□□□ -0.94
TMEM39A-212ENST00000497993 EHBP1L1Q8N3D4 1523 aa9.17□□□□□ -0.94
TMEM39A-212ENST00000497993 MAGI2Q86UL8 1455 aa9.17□□□□□ -0.94
TMEM39A-212ENST00000497993 PLEKHD1A6NEE1 506 aa9.17□□□□□ -0.94
TMEM39A-212ENST00000497993 TTLL12Q14166 644 aaPredicted RBP9.17□□□□□ -0.94
TMEM39A-212ENST00000497993 RSPH4AQ5TD94 716 aa9.17□□□□□ -0.94
TMEM39A-212ENST00000497993 SULF1Q8IWU6 871 aa9.17□□□□□ -0.94
TMEM39A-212ENST00000497993 ABCC1P33527 1531 aa9.16□□□□□ -0.94
TMEM39A-212ENST00000497993 NLRP7Q8WX94 980 aa9.16□□□□□ -0.94
TMEM39A-212ENST00000497993 BCORL1Q5H9F3 1711 aa9.16□□□□□ -0.94
TMEM39A-212ENST00000497993 AKNAQ7Z591 1439 aa9.15□□□□□ -0.94
TMEM39A-212ENST00000497993 THSD4Q6ZMP0 1018 aa9.15□□□□□ -0.94
TMEM39A-212ENST00000497993 KCTD12Q96CX2 325 aaKnown RBP9.15□□□□□ -0.94
TMEM39A-212ENST00000497993 TIAM1Q13009 1591 aa9.15□□□□□ -0.95
TMEM39A-212ENST00000497993 DENND4BO75064 1496 aaPredicted RBP9.15□□□□□ -0.95
TMEM39A-212ENST00000497993 POGZQ7Z3K3 1410 aa9.14□□□□□ -0.95
TMEM39A-212ENST00000497993 SIGLEC1Q9BZZ2 1709 aa9.14□□□□□ -0.95
TMEM39A-212ENST00000497993 PARP9Q8IXQ6 854 aa9.14□□□□□ -0.95
TMEM39A-212ENST00000497993 CDK11AQ9UQ88 783 aaPredicted RBP9.14□□□□□ -0.95
TMEM39A-212ENST00000497993 SUPT6HQ7KZ85 1726 aaKnown RBP9.14□□□□□ -0.95
TMEM39A-212ENST00000497993 VPS8Q8N3P4 1428 aa9.14□□□□□ -0.95
TMEM39A-212ENST00000497993 HECW2Q9P2P5 1572 aa9.13□□□□□ -0.95
TMEM39A-212ENST00000497993 GIGYF2Q6Y7W6 1299 aaKnown RBP9.13□□□□□ -0.95
TMEM39A-212ENST00000497993 RNF166Q96A37 237 aaPredicted RBP9.13□□□□□ -0.95
TMEM39A-212ENST00000497993 REPIN1Q9BWE0 567 aaKnown RBP9.13□□□□□ -0.95
TMEM39A-212ENST00000497993 FAM217BQ9NTX9 383 aaPredicted RBP9.13□□□□□ -0.95
TMEM39A-212ENST00000497993 TSR3Q9UJK0 312 aaKnown RBP9.13□□□□□ -0.95
TMEM39A-212ENST00000497993 ADGRL1O94910 1474 aa9.13□□□□□ -0.95
TMEM39A-212ENST00000497993 SAMD9LQ8IVG5 1584 aa9.12□□□□□ -0.95
TMEM39A-212ENST00000497993 KIDINS220Q9ULH0 1771 aa9.12□□□□□ -0.95
TMEM39A-212ENST00000497993 BCAMP50895 628 aa9.12□□□□□ -0.95
TMEM39A-212ENST00000497993 PPP4CP60510 307 aa9.12□□□□□ -0.95
TMEM39A-212ENST00000497993 ZNF518AQ6AHZ1 1483 aa9.12□□□□□ -0.95
TMEM39A-212ENST00000497993 ZFYVE16Q7Z3T8 1539 aa9.11□□□□□ -0.95
TMEM39A-212ENST00000497993 DDX11L8A8MPP1 907 aa9.11□□□□□ -0.95
TMEM39A-212ENST00000497993 SSTR3P32745 418 aaPredicted RBP9.11□□□□□ -0.95
TMEM39A-212ENST00000497993 MMRN1Q13201 1228 aa9.11□□□□□ -0.95
TMEM39A-212ENST00000497993 KCTD17Q8N5Z5 321 aa9.11□□□□□ -0.95
TMEM39A-212ENST00000497993 INO80Q9ULG1 1556 aaPredicted RBP9.11□□□□□ -0.95
TMEM39A-212ENST00000497993 ARHGAP5Q13017 1502 aa9.1□□□□□ -0.95
TMEM39A-212ENST00000497993 GPATCH8Q9UKJ3 1502 aaKnown RBP9.1□□□□□ -0.95
TMEM39A-212ENST00000497993 MLH3Q9UHC1 1453 aa9.1□□□□□ -0.95
TMEM39A-212ENST00000497993 RNF40O75150 1001 aa9.1□□□□□ -0.95
TMEM39A-212ENST00000497993 NYAP1Q6ZVC0 841 aa9.1□□□□□ -0.95
TMEM39A-212ENST00000497993 HPS5Q9UPZ3 1129 aa9.1□□□□□ -0.95
TMEM39A-212ENST00000497993 DIP2CQ9Y2E4 1556 aa9.1□□□□□ -0.95
TMEM39A-212ENST00000497993 ABCA6Q8N139 1617 aa9.09□□□□□ -0.95
TMEM39A-212ENST00000497993 KIAA1107Q9UPP5 1409 aa9.09□□□□□ -0.95
TMEM39A-212ENST00000497993 SLC10A3P09131 477 aa9.09□□□□□ -0.95
TMEM39A-212ENST00000497993 CD46P15529 392 aa9.09□□□□□ -0.95
TMEM39A-212ENST00000497993 RDH13Q8NBN7 331 aa9.09□□□□□ -0.95
TMEM39A-212ENST00000497993 PRR14Q9BWN1 585 aa9.09□□□□□ -0.95
TMEM39A-212ENST00000497993 PLEKHH2Q8IVE3 1493 aa9.08□□□□□ -0.96
TMEM39A-212ENST00000497993 SETD1BQ9UPS6 1966 aaKnown RBP9.08□□□□□ -0.96
TMEM39A-212ENST00000497993 CCDC82Q8N4S0 544 aa9.08□□□□□ -0.96
TMEM39A-212ENST00000497993 HCSTQ9UBK5 93 aa9.08□□□□□ -0.96
TMEM39A-212ENST00000497993 AGLP35573 1532 aa9.08□□□□□ -0.96
TMEM39A-212ENST00000497993 ARHGEF12Q9NZN5 1544 aa9.08□□□□□ -0.96
TMEM39A-212ENST00000497993 FER1L4A9Z1Z3 1794 aa9.08□□□□□ -0.96
TMEM39A-212ENST00000497993 PLXNC1O60486 1568 aa9.07□□□□□ -0.96
TMEM39A-212ENST00000497993 ADGBQ8N7X0 1667 aa9.07□□□□□ -0.96
TMEM39A-212ENST00000497993 SCAPERQ9BY12 1400 aa9.07□□□□□ -0.96
TMEM39A-212ENST00000497993 A6NJR5 290 aa9.07□□□□□ -0.96
TMEM39A-212ENST00000497993 TRAIPQ9BWF2 469 aa9.07□□□□□ -0.96
TMEM39A-212ENST00000497993 WBP1LQ9NX94 342 aa9.07□□□□□ -0.96
TMEM39A-212ENST00000497993 SYCP2Q9BX26 1530 aa9.06□□□□□ -0.96
TMEM39A-212ENST00000497993 MADDQ8WXG6 1647 aa9.06□□□□□ -0.96
TMEM39A-212ENST00000497993 MS4A1P11836 297 aa9.06□□□□□ -0.96
TMEM39A-212ENST00000497993 GCGRP47871 477 aa9.06□□□□□ -0.96
TMEM39A-212ENST00000497993 PTPN5P54829 565 aa9.06□□□□□ -0.96
TMEM39A-212ENST00000497993 KMT5BQ4FZB7 885 aa9.06□□□□□ -0.96
TMEM39A-212ENST00000497993 DDRGK1Q96HY6 314 aa9.06□□□□□ -0.96
TMEM39A-212ENST00000497993 LRRC9Q6ZRR7 1453 aa9.06□□□□□ -0.96
TMEM39A-212ENST00000497993 ARHGEF5Q12774 1597 aa9.06□□□□□ -0.96
TMEM39A-212ENST00000497993 C9orf84Q5VXU9 1444 aa9.05□□□□□ -0.96
TMEM39A-212ENST00000497993 MROH2AA6NES4 1674 aa9.05□□□□□ -0.96
TMEM39A-212ENST00000497993 EFCAB2Q5VUJ9 269 aa9.05□□□□□ -0.96
TMEM39A-212ENST00000497993 YEATS2Q9ULM3 1422 aa9.05□□□□□ -0.96
TMEM39A-212ENST00000497993 ATP10AO60312 1499 aa9.04□□□□□ -0.96
TMEM39A-212ENST00000497993 NCOA2Q15596 1464 aa9.04□□□□□ -0.96
TMEM39A-212ENST00000497993 MTUS2Q5JR59 1369 aa9.04□□□□□ -0.96
TMEM39A-212ENST00000497993 RAD21O60216 631 aa9.04□□□□□ -0.96
TMEM39A-212ENST00000497993 TRAK2O60296 914 aa9.04□□□□□ -0.96
TMEM39A-212ENST00000497993 CFHP08603 1231 aa9.04□□□□□ -0.96
TMEM39A-212ENST00000497993 BEGAINQ9BUH8 593 aa9.04□□□□□ -0.96
TMEM39A-212ENST00000497993 CROCC2H7BZ55 1655 aa9.04□□□□□ -0.96
TMEM39A-212ENST00000497993 RIMS1Q86UR5 1692 aaKnown RBP9.04□□□□□ -0.96
TMEM39A-212ENST00000497993 MAST1Q9Y2H9 1570 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms