RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 DDX10Q13206 875 aaKnown RBP27.58■■■□□ 2.01
ACTN4-208ENST00000497637 NBPF14Q5TI25 921 aa27.57■■■□□ 2
ACTN4-208ENST00000497637 PPP1R1BQ9UD71 204 aaPredicted RBP27.57■■■□□ 2
ACTN4-208ENST00000497637 SPATA31A5Q5VU36 1347 aa27.57■■■□□ 2
ACTN4-208ENST00000497637 SPATA31A7Q8IWB4 1347 aa27.57■■■□□ 2
ACTN4-208ENST00000497637 SIRT1Q96EB6 747 aa27.55■■■□□ 2
ACTN4-208ENST00000497637 ADGRB2O60241 1585 aa27.55■■■□□ 2
ACTN4-208ENST00000497637 SPON1Q9HCB6 807 aa27.54■■■□□ 2
ACTN4-208ENST00000497637 FMN2Q9NZ56 1722 aa27.54■■■□□ 2
ACTN4-208ENST00000497637 PLEKHH1Q9ULM0 1364 aa27.54■■■□□ 2
ACTN4-208ENST00000497637 NINLQ9Y2I6 1382 aa27.53■■■□□ 2
ACTN4-208ENST00000497637 TRIM37O94972 964 aa27.53■■■□□ 2
ACTN4-208ENST00000497637 APBA3O96018 575 aa27.53■■■□□ 2
ACTN4-208ENST00000497637 NRXN1Q9ULB1 1477 aa27.51■■■□□ 2
ACTN4-208ENST00000497637 USP47Q96K76 1375 aa27.51■■□□□ 1.99
ACTN4-208ENST00000497637 PPLO60437 1756 aa27.51■■□□□ 1.99
ACTN4-208ENST00000497637 ADGRF5Q8IZF2 1346 aa27.51■■□□□ 1.99
ACTN4-208ENST00000497637 CARD11Q9BXL7 1154 aa27.51■■□□□ 1.99
ACTN4-208ENST00000497637 GPRASP1Q5JY77 1395 aa27.49■■□□□ 1.99
ACTN4-208ENST00000497637 WASHC2AQ641Q2 1341 aa27.48■■□□□ 1.99
ACTN4-208ENST00000497637 TNS1Q9HBL0 1735 aaKnown RBP27.48■■□□□ 1.99
ACTN4-208ENST00000497637 TMEM132EQ6IEE7 984 aa27.48■■□□□ 1.99
ACTN4-208ENST00000497637 NRAPQ86VF7 1730 aa27.47■■□□□ 1.99
ACTN4-208ENST00000497637 ROCK2O75116 1388 aaKnown RBP27.47■■□□□ 1.99
ACTN4-208ENST00000497637 KCNQ2O43526 872 aa27.46■■□□□ 1.99
ACTN4-208ENST00000497637 ABCA3Q99758 1704 aa27.46■■□□□ 1.99
ACTN4-208ENST00000497637 CCDC7Q96M83 1385 aa27.46■■□□□ 1.99
ACTN4-208ENST00000497637 TRPM1Q7Z4N2 1603 aa27.45■■□□□ 1.99
ACTN4-208ENST00000497637 COL14A1Q05707 1796 aaKnown RBP27.45■■□□□ 1.98
ACTN4-208ENST00000497637 YTHDC2Q9H6S0 1430 aaKnown RBP27.44■■□□□ 1.98
ACTN4-208ENST00000497637 THSD7AQ9UPZ6 1657 aa27.43■■□□□ 1.98
ACTN4-208ENST00000497637 C11orf95C9JLR9 678 aaPredicted RBP27.43■■□□□ 1.98
ACTN4-208ENST00000497637 KNDC1Q76NI1 1749 aa27.42■■□□□ 1.98
ACTN4-208ENST00000497637 SPATA31A1Q5TZJ5 1347 aa27.41■■□□□ 1.98
ACTN4-208ENST00000497637 IFFO2Q5TF58 517 aa27.41■■□□□ 1.98
ACTN4-208ENST00000497637 PRDM11Q9NQV5 511 aa27.41■■□□□ 1.98
ACTN4-208ENST00000497637 NBPF1Q3BBV0 1214 aa27.4■■□□□ 1.98
ACTN4-208ENST00000497637 PMFBP1Q8TBY8 1022 aa27.39■■□□□ 1.98
ACTN4-208ENST00000497637 PDE3BQ13370 1112 aa27.38■■□□□ 1.97
ACTN4-208ENST00000497637 ZNF784Q8NCA9 323 aaPredicted RBP27.38■■□□□ 1.97
ACTN4-208ENST00000497637 ANKARQ7Z5J8 1434 aa27.38■■□□□ 1.97
ACTN4-208ENST00000497637 KIF7Q2M1P5 1343 aa27.37■■□□□ 1.97
ACTN4-208ENST00000497637 PIK3C2GO75747 1445 aa27.35■■□□□ 1.97
ACTN4-208ENST00000497637 SENP3-EIF4A1A0A087X0R7 540 aa27.35■■□□□ 1.97
ACTN4-208ENST00000497637 IFT172Q9UG01 1749 aa27.33■■□□□ 1.97
ACTN4-208ENST00000497637 RGPD8O14715 1765 aaPredicted RBP27.33■■□□□ 1.97
ACTN4-208ENST00000497637 ST20-MTHFSA0A0A6YYL1 179 aa27.32■■□□□ 1.96
ACTN4-208ENST00000497637 BARGINQ6ZT62 677 aa27.32■■□□□ 1.96
ACTN4-208ENST00000497637 PRAM1Q96QH2 718 aa27.31■■□□□ 1.96
ACTN4-208ENST00000497637 C14orf93Q9H972 538 aaKnown RBP27.31■■□□□ 1.96
ACTN4-208ENST00000497637 RREB1Q92766 1687 aa27.3■■□□□ 1.96
ACTN4-208ENST00000497637 ANP32CO43423 234 aa27.29■■□□□ 1.96
ACTN4-208ENST00000497637 STRN4Q9NRL3 753 aa27.29■■□□□ 1.96
ACTN4-208ENST00000497637 SAFB2Q14151 953 aaKnown RBP eCLIP27.28■■□□□ 1.96
ACTN4-208ENST00000497637 NUP188Q5SRE5 1749 aa27.27■■□□□ 1.96
ACTN4-208ENST00000497637 EIF3AQ14152 1382 aaKnown RBP27.27■■□□□ 1.96
ACTN4-208ENST00000497637 C1QTNF8P60827 252 aa27.27■■□□□ 1.96
ACTN4-208ENST00000497637 POGKQ9P215 609 aa27.27■■□□□ 1.96
ACTN4-208ENST00000497637 TRPM3Q9HCF6 1732 aaPredicted RBP27.25■■□□□ 1.95
ACTN4-208ENST00000497637 KIAA1210Q9ULL0 1709 aa27.25■■□□□ 1.95
ACTN4-208ENST00000497637 PAK3O75914 559 aaPredicted RBP27.25■■□□□ 1.95
ACTN4-208ENST00000497637 EVA1CP58658 441 aa27.25■■□□□ 1.95
ACTN4-208ENST00000497637 USP35Q9P2H5 1018 aa27.25■■□□□ 1.95
ACTN4-208ENST00000497637 KIAA0232Q92628 1395 aa27.24■■□□□ 1.95
ACTN4-208ENST00000497637 ALS2Q96Q42 1657 aa27.24■■□□□ 1.95
ACTN4-208ENST00000497637 CCER2I3L3R5 266 aa27.22■■□□□ 1.95
ACTN4-208ENST00000497637 NGDNQ8NEJ9 315 aaKnown RBP27.22■■□□□ 1.95
ACTN4-208ENST00000497637 CHRNA2Q15822 529 aa27.21■■□□□ 1.95
ACTN4-208ENST00000497637 TCP11L2Q8N4U5 519 aa27.21■■□□□ 1.95
ACTN4-208ENST00000497637 UTRNP46939 3433 aa27.21■■□□□ 1.95
ACTN4-208ENST00000497637 PLSCR1O15162 318 aa27.19■■□□□ 1.94
ACTN4-208ENST00000497637 TESK2Q96S53 571 aa27.19■■□□□ 1.94
ACTN4-208ENST00000497637 THRAP3Q9Y2W1 955 aaKnown RBP27.19■■□□□ 1.94
ACTN4-208ENST00000497637 CFAP70Q5T0N1 1121 aa27.18■■□□□ 1.94
ACTN4-208ENST00000497637 CAMTA1Q9Y6Y1 1673 aa27.16■■□□□ 1.94
ACTN4-208ENST00000497637 SSH2Q76I76 1423 aa27.16■■□□□ 1.94
ACTN4-208ENST00000497637 ZC3H6P61129 1189 aaKnown RBP27.15■■□□□ 1.94
ACTN4-208ENST00000497637 DLC1Q96QB1 1528 aa27.15■■□□□ 1.94
ACTN4-208ENST00000497637 PRR36Q9H6K5 1346 aa27.13■■□□□ 1.93
ACTN4-208ENST00000497637 CENPBP07199 599 aaPredicted RBP27.12■■□□□ 1.93
ACTN4-208ENST00000497637 CRYBG1Q9Y4K1 1723 aa27.12■■□□□ 1.93
ACTN4-208ENST00000497637 WASLO00401 505 aaPredicted RBP27.11■■□□□ 1.93
ACTN4-208ENST00000497637 PTGER2P43116 358 aa27.11■■□□□ 1.93
ACTN4-208ENST00000497637 LARP1Q6PKG0 1096 aaKnown RBP27.11■■□□□ 1.93
ACTN4-208ENST00000497637 ZBTB7AO95365 584 aa27.1■■□□□ 1.93
ACTN4-208ENST00000497637 TMF1P82094 1093 aa27.1■■□□□ 1.93
ACTN4-208ENST00000497637 SYT17Q9BSW7 474 aa27.1■■□□□ 1.93
ACTN4-208ENST00000497637 POLR3GLQ9BT43 218 aa27.1■■□□□ 1.93
ACTN4-208ENST00000497637 TULP4Q9NRJ4 1543 aa27.1■■□□□ 1.93
ACTN4-208ENST00000497637 BCL11BQ9C0K0 894 aaPredicted RBP27.09■■□□□ 1.93
ACTN4-208ENST00000497637 ANO8Q9HCE9 1232 aaPredicted RBP27.09■■□□□ 1.93
ACTN4-208ENST00000497637 NRKQ7Z2Y5 1582 aa27.09■■□□□ 1.93
ACTN4-208ENST00000497637 FHDC1Q9C0D6 1143 aaPredicted RBP27.08■■□□□ 1.93
ACTN4-208ENST00000497637 OVOS2A0A0G2JMS6 1433 aa27.07■■□□□ 1.92
ACTN4-208ENST00000497637 OVOS2A0A0J9YW53 1432 aa27.07■■□□□ 1.92
ACTN4-208ENST00000497637 OVOS2Q6IE36 1432 aa27.07■■□□□ 1.92
ACTN4-208ENST00000497637 MINK1Q8N4C8 1332 aaPredicted RBP27.07■■□□□ 1.92
ACTN4-208ENST00000497637 ATP7BP35670 1465 aa27.06■■□□□ 1.92
ACTN4-208ENST00000497637 SLC24A1O60721 1099 aa27.06■■□□□ 1.92
ACTN4-208ENST00000497637 YTHDC1Q96MU7 727 aaKnown RBP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms