RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 IL27Q8NEV9 243 aa15.15■□□□□ 0.02
SNRNP200-208ENST00000497539 RCAN3Q9UKA8 241 aa15.15■□□□□ 0.02
SNRNP200-208ENST00000497539 ROBO2Q9HCK4 1378 aa15.15■□□□□ 0.02
SNRNP200-208ENST00000497539 CFAP53Q96M91 514 aa15.15■□□□□ 0.02
SNRNP200-208ENST00000497539 PTPRUQ92729 1446 aa15.14■□□□□ 0.01
SNRNP200-208ENST00000497539 LTKP29376 864 aa15.14■□□□□ 0.01
SNRNP200-208ENST00000497539 RRP1P56182 461 aaKnown RBP15.14■□□□□ 0.01
SNRNP200-208ENST00000497539 WAPLQ7Z5K2 1190 aa15.14■□□□□ 0.01
SNRNP200-208ENST00000497539 PPIP5K1Q6PFW1 1433 aa15.14■□□□□ 0.01
SNRNP200-208ENST00000497539 ANP32AP39687 249 aaKnown RBP15.14■□□□□ 0.01
SNRNP200-208ENST00000497539 PIK3R4Q99570 1358 aa15.14■□□□□ 0.01
SNRNP200-208ENST00000497539 FYB1O15117 783 aa15.13■□□□□ 0.01
SNRNP200-208ENST00000497539 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
SNRNP200-208ENST00000497539 TBX22Q9Y458 520 aa15.13■□□□□ 0.01
SNRNP200-208ENST00000497539 NPM2Q86SE8 214 aaKnown RBP15.13■□□□□ 0.01
SNRNP200-208ENST00000497539 PHF23Q9BUL5 403 aaPredicted RBP15.13■□□□□ 0.01
SNRNP200-208ENST00000497539 CDCA7LQ96GN5 454 aa15.12■□□□□ 0.01
SNRNP200-208ENST00000497539 IPO9Q96P70 1041 aaKnown RBP15.12■□□□□ 0.01
SNRNP200-208ENST00000497539 EID1Q9Y6B2 187 aa15.12■□□□□ 0.01
SNRNP200-208ENST00000497539 MTHFSP49914 203 aa15.12■□□□□ 0.01
SNRNP200-208ENST00000497539 DUSP27Q5VZP5 1158 aa15.12■□□□□ 0.01
SNRNP200-208ENST00000497539 ZBTB47Q9UFB7 747 aaPredicted RBP15.12■□□□□ 0.01
SNRNP200-208ENST00000497539 GOLGA2Q08379 1002 aa15.11■□□□□ 0.01
SNRNP200-208ENST00000497539 SLFN5Q08AF3 891 aa15.11■□□□□ 0.01
SNRNP200-208ENST00000497539 THEMISQ8N1K5 641 aaPredicted RBP15.11■□□□□ 0.01
SNRNP200-208ENST00000497539 BCL11BQ9C0K0 894 aaPredicted RBP15.11■□□□□ 0.01
SNRNP200-208ENST00000497539 CABP1Q9NZU7 370 aa15.11■□□□□ 0.01
SNRNP200-208ENST00000497539 NALCNQ8IZF0 1738 aa15.11■□□□□ 0.01
SNRNP200-208ENST00000497539 CEBPAP49715 358 aaPredicted RBP15.1■□□□□ 0.01
SNRNP200-208ENST00000497539 CCDC27Q2M243 656 aa15.1■□□□□ 0.01
SNRNP200-208ENST00000497539 TXNDC2Q86VQ3 553 aa15.1■□□□□ 0.01
SNRNP200-208ENST00000497539 RUNDC1Q96C34 613 aa15.1■□□□□ 0.01
SNRNP200-208ENST00000497539 AATKQ6ZMQ8 1374 aa15.1■□□□□ 0.01
SNRNP200-208ENST00000497539 NKTRP30414 1462 aaKnown RBP15.09■□□□□ 0.01
SNRNP200-208ENST00000497539 TAF7LQ5H9L4 462 aa15.09■□□□□ 0.01
SNRNP200-208ENST00000497539 USP54Q70EL1 1684 aa15.09■□□□□ 0.01
SNRNP200-208ENST00000497539 CDK12Q9NYV4 1490 aaPredicted RBP15.08■□□□□ 0.01
SNRNP200-208ENST00000497539 E9PSI1 815 aa15.08■□□□□ 0
SNRNP200-208ENST00000497539 APAF1O14727 1248 aa15.08■□□□□ 0
SNRNP200-208ENST00000497539 NUDT16Q96DE0 195 aaKnown RBP15.08■□□□□ 0
SNRNP200-208ENST00000497539 CCDC61Q9Y6R9 512 aa15.08■□□□□ 0
SNRNP200-208ENST00000497539 RBM10P98175 930 aaKnown RBP15.07■□□□□ 0
SNRNP200-208ENST00000497539 LRRC7Q96NW7 1537 aa15.07■□□□□ 0
SNRNP200-208ENST00000497539 CHD2O14647 1828 aaKnown RBP15.07■□□□□ 0
SNRNP200-208ENST00000497539 RTL5Q5HYW3 569 aaPredicted RBP15.07■□□□□ 0
SNRNP200-208ENST00000497539 FMN2Q9NZ56 1722 aa15.06■□□□□ 0
SNRNP200-208ENST00000497539 CCDC146Q8IYE0 955 aa15.06■□□□□ 0
SNRNP200-208ENST00000497539 ANKARQ7Z5J8 1434 aa15.06■□□□□ 0
SNRNP200-208ENST00000497539 PRR36Q9H6K5 1346 aa15.06■□□□□ 0
SNRNP200-208ENST00000497539 ZNF692Q9BU19 519 aaPredicted RBP15.06■□□□□ 0
SNRNP200-208ENST00000497539 GGNBP2Q9H3C7 697 aa15.06■□□□□ 0
SNRNP200-208ENST00000497539 MAP2P11137 1827 aaKnown RBP15.05■□□□□ 0
SNRNP200-208ENST00000497539 PLEKHG3A1L390 1219 aa15.05■□□□□ 0
SNRNP200-208ENST00000497539 EXOC6Q8TAG9 804 aa15.05■□□□□ 0
SNRNP200-208ENST00000497539 SSH2Q76I76 1423 aa15.05■□□□□ -0
SNRNP200-208ENST00000497539 SENP3Q9H4L4 574 aaPredicted RBP15.05■□□□□ -0
SNRNP200-208ENST00000497539 WDR63Q8IWG1 891 aa15.04■□□□□ -0
SNRNP200-208ENST00000497539 WWC1Q8IX03 1113 aa15.03■□□□□ -0
SNRNP200-208ENST00000497539 SETD1BQ9UPS6 1966 aaKnown RBP15.03■□□□□ -0
SNRNP200-208ENST00000497539 TNNT2P45379 298 aaPredicted RBP15.03■□□□□ -0
SNRNP200-208ENST00000497539 LAS1LQ9Y4W2 734 aaKnown RBP15.03■□□□□ -0
SNRNP200-208ENST00000497539 A0A0U1RQG5 324 aaPredicted RBP15.02■□□□□ -0
SNRNP200-208ENST00000497539 AEBP2Q6ZN18 517 aaPredicted RBP15.02■□□□□ -0
SNRNP200-208ENST00000497539 VSIG10Q8N0Z9 540 aa15.02■□□□□ -0
SNRNP200-208ENST00000497539 PLEKHF1Q96S99 279 aa15.02■□□□□ -0
SNRNP200-208ENST00000497539 OVOS2A0A0J9YW53 1432 aa15.02■□□□□ -0
SNRNP200-208ENST00000497539 OVOS2Q6IE36 1432 aa15.02■□□□□ -0
SNRNP200-208ENST00000497539 USP6P35125 1406 aa15.02□□□□□ -0.01
SNRNP200-208ENST00000497539 SKAP1Q86WV1 359 aa15.01□□□□□ -0.01
SNRNP200-208ENST00000497539 RSPH6AQ9H0K4 717 aa15.01□□□□□ -0.01
SNRNP200-208ENST00000497539 NWD1Q149M9 1564 aa15.01□□□□□ -0.01
SNRNP200-208ENST00000497539 TCP11L2Q8N4U5 519 aa15□□□□□ -0.01
SNRNP200-208ENST00000497539 RTN4Q9NQC3 1192 aaKnown RBP15□□□□□ -0.01
SNRNP200-208ENST00000497539 AMOTL2Q9Y2J4 779 aa15□□□□□ -0.01
SNRNP200-208ENST00000497539 PNNQ9H307 717 aaKnown RBP15□□□□□ -0.01
SNRNP200-208ENST00000497539 SPINK5Q9NQ38 1064 aaPredicted RBP14.99□□□□□ -0.01
SNRNP200-208ENST00000497539 POLKQ9UBT6 870 aa14.99□□□□□ -0.01
SNRNP200-208ENST00000497539 USP31Q70CQ4 1352 aa14.99□□□□□ -0.01
SNRNP200-208ENST00000497539 DIAPH1O60610 1272 aaKnown RBP14.98□□□□□ -0.01
SNRNP200-208ENST00000497539 RGPD1P0DJD0 1748 aa14.98□□□□□ -0.01
SNRNP200-208ENST00000497539 SLC26A8Q96RN1 970 aa14.98□□□□□ -0.01
SNRNP200-208ENST00000497539 IL16Q14005 1332 aa14.97□□□□□ -0.01
SNRNP200-208ENST00000497539 U2AF1L5P0DN76 240 aaPredicted RBP14.97□□□□□ -0.01
SNRNP200-208ENST00000497539 U2AF1Q01081 240 aaKnown RBP eCLIP14.97□□□□□ -0.01
SNRNP200-208ENST00000497539 RGPD8O14715 1765 aaPredicted RBP14.97□□□□□ -0.01
SNRNP200-208ENST00000497539 PDE4AP27815 886 aa14.97□□□□□ -0.01
SNRNP200-208ENST00000497539 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.97□□□□□ -0.01
SNRNP200-208ENST00000497539 DMRT2Q9Y5R5 561 aa14.97□□□□□ -0.01
SNRNP200-208ENST00000497539 MARF1Q9Y4F3 1742 aaKnown RBP14.97□□□□□ -0.01
SNRNP200-208ENST00000497539 PLIN1O60240 522 aa14.96□□□□□ -0.01
SNRNP200-208ENST00000497539 TTC21AQ8NDW8 1320 aa14.96□□□□□ -0.01
SNRNP200-208ENST00000497539 FCHSD2O94868 740 aa14.96□□□□□ -0.02
SNRNP200-208ENST00000497539 TTC21BQ7Z4L5 1316 aa14.96□□□□□ -0.02
SNRNP200-208ENST00000497539 NME9Q86XW9 330 aa14.95□□□□□ -0.02
SNRNP200-208ENST00000497539 PIK3C2AO00443 1686 aa14.95□□□□□ -0.02
SNRNP200-208ENST00000497539 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.95□□□□□ -0.02
SNRNP200-208ENST00000497539 PEAK1Q9H792 1746 aa14.94□□□□□ -0.02
SNRNP200-208ENST00000497539 ACEP12821 1306 aa14.94□□□□□ -0.02
SNRNP200-208ENST00000497539 NEFMP07197 916 aa14.94□□□□□ -0.02
SNRNP200-208ENST00000497539 CT47B1P0C2W7 299 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms