RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 PPARGC1BQ86YN6 1023 aaKnown RBP14.74□□□□□ -0.05
SRSF4-205ENST00000497015 THSD7AQ9UPZ6 1657 aa14.73□□□□□ -0.05
SRSF4-205ENST00000497015 ARHGEF10O15013 1369 aa14.73□□□□□ -0.05
SRSF4-205ENST00000497015 YTHDC2Q9H6S0 1430 aaKnown RBP14.72□□□□□ -0.05
SRSF4-205ENST00000497015 FAM196AQ6ZSG2 479 aa14.71□□□□□ -0.05
SRSF4-205ENST00000497015 SPATA31A1Q5TZJ5 1347 aa14.7□□□□□ -0.06
SRSF4-205ENST00000497015 SPATA31E1Q6ZUB1 1445 aa14.69□□□□□ -0.06
SRSF4-205ENST00000497015 KCNQ2O43526 872 aa14.69□□□□□ -0.06
SRSF4-205ENST00000497015 SAFB2Q14151 953 aaKnown RBP eCLIP14.69□□□□□ -0.06
SRSF4-205ENST00000497015 ZNF784Q8NCA9 323 aaPredicted RBP14.68□□□□□ -0.06
SRSF4-205ENST00000497015 C14orf93Q9H972 538 aaKnown RBP14.68□□□□□ -0.06
SRSF4-205ENST00000497015 SPON1Q9HCB6 807 aa14.68□□□□□ -0.06
SRSF4-205ENST00000497015 PIK3C2GO75747 1445 aa14.67□□□□□ -0.06
SRSF4-205ENST00000497015 KNDC1Q76NI1 1749 aa14.67□□□□□ -0.06
SRSF4-205ENST00000497015 PRAM1Q96QH2 718 aa14.67□□□□□ -0.06
SRSF4-205ENST00000497015 COL14A1Q05707 1796 aaKnown RBP14.67□□□□□ -0.06
SRSF4-205ENST00000497015 PRR36Q9H6K5 1346 aa14.66□□□□□ -0.06
SRSF4-205ENST00000497015 TRPM3Q9HCF6 1732 aaPredicted RBP14.66□□□□□ -0.06
SRSF4-205ENST00000497015 PARD3Q8TEW0 1356 aa14.66□□□□□ -0.06
SRSF4-205ENST00000497015 CHRNA2Q15822 529 aa14.66□□□□□ -0.06
SRSF4-205ENST00000497015 CFAP70Q5T0N1 1121 aa14.66□□□□□ -0.06
SRSF4-205ENST00000497015 PDGFDQ9GZP0 370 aaPredicted RBP14.66□□□□□ -0.06
SRSF4-205ENST00000497015 CAMTA1Q9Y6Y1 1673 aa14.65□□□□□ -0.06
SRSF4-205ENST00000497015 NBPF8Q3BBV2 869 aa14.65□□□□□ -0.06
SRSF4-205ENST00000497015 NBPF14Q5TI25 921 aa14.65□□□□□ -0.06
SRSF4-205ENST00000497015 PPP1R1BQ9UD71 204 aaPredicted RBP14.65□□□□□ -0.06
SRSF4-205ENST00000497015 IFT172Q9UG01 1749 aa14.65□□□□□ -0.06
SRSF4-205ENST00000497015 RREB1Q92766 1687 aa14.65□□□□□ -0.06
SRSF4-205ENST00000497015 NUP188Q5SRE5 1749 aa14.64□□□□□ -0.07
SRSF4-205ENST00000497015 ANKRD30BQ9BXX2 1392 aa14.64□□□□□ -0.07
SRSF4-205ENST00000497015 ALS2Q96Q42 1657 aa14.64□□□□□ -0.07
SRSF4-205ENST00000497015 ACIN1Q9UKV3 1341 aaKnown RBP14.64□□□□□ -0.07
SRSF4-205ENST00000497015 IFFO2Q5TF58 517 aa14.63□□□□□ -0.07
SRSF4-205ENST00000497015 PRDM11Q9NQV5 511 aa14.63□□□□□ -0.07
SRSF4-205ENST00000497015 STRN4Q9NRL3 753 aa14.63□□□□□ -0.07
SRSF4-205ENST00000497015 USP35Q9P2H5 1018 aa14.63□□□□□ -0.07
SRSF4-205ENST00000497015 KIAA0232Q92628 1395 aa14.62□□□□□ -0.07
SRSF4-205ENST00000497015 NINLQ9Y2I6 1382 aa14.62□□□□□ -0.07
SRSF4-205ENST00000497015 BARGINQ6ZT62 677 aa14.62□□□□□ -0.07
SRSF4-205ENST00000497015 HIRIP3Q9BW71 556 aaPredicted RBP14.62□□□□□ -0.07
SRSF4-205ENST00000497015 CRYBG1Q9Y4K1 1723 aa14.61□□□□□ -0.07
SRSF4-205ENST00000497015 PTF1AQ7RTS3 328 aa14.61□□□□□ -0.07
SRSF4-205ENST00000497015 ANO8Q9HCE9 1232 aaPredicted RBP14.61□□□□□ -0.07
SRSF4-205ENST00000497015 UTRNP46939 3433 aa14.61□□□□□ -0.07
SRSF4-205ENST00000497015 ADGRB2O60241 1585 aa14.6□□□□□ -0.07
SRSF4-205ENST00000497015 ANKARQ7Z5J8 1434 aa14.6□□□□□ -0.07
SRSF4-205ENST00000497015 ZC3H6P61129 1189 aaKnown RBP14.6□□□□□ -0.07
SRSF4-205ENST00000497015 PDE3BQ13370 1112 aa14.6□□□□□ -0.07
SRSF4-205ENST00000497015 PROM2Q8N271 834 aa14.6□□□□□ -0.07
SRSF4-205ENST00000497015 DHX57Q6P158 1386 aaKnown RBP14.6□□□□□ -0.07
SRSF4-205ENST00000497015 SENP3-EIF4A1A0A087X0R7 540 aa14.59□□□□□ -0.07
SRSF4-205ENST00000497015 DCAF8L1A6NGE4 600 aa14.59□□□□□ -0.07
SRSF4-205ENST00000497015 PTGER2P43116 358 aa14.59□□□□□ -0.07
SRSF4-205ENST00000497015 LARP1Q6PKG0 1096 aaKnown RBP14.59□□□□□ -0.07
SRSF4-205ENST00000497015 GPRASP1Q5JY77 1395 aa14.59□□□□□ -0.07
SRSF4-205ENST00000497015 PAK3O75914 559 aaPredicted RBP14.58□□□□□ -0.08
SRSF4-205ENST00000497015 C1QTNF8P60827 252 aa14.58□□□□□ -0.08
SRSF4-205ENST00000497015 NUTM2GQ5VZR2 741 aa14.57□□□□□ -0.08
SRSF4-205ENST00000497015 POGKQ9P215 609 aa14.57□□□□□ -0.08
SRSF4-205ENST00000497015 MYCNP04198 464 aaPredicted RBP14.56□□□□□ -0.08
SRSF4-205ENST00000497015 WASLO00401 505 aaPredicted RBP14.55□□□□□ -0.08
SRSF4-205ENST00000497015 PLSCR1O15162 318 aa14.55□□□□□ -0.08
SRSF4-205ENST00000497015 ZBTB7AO95365 584 aa14.55□□□□□ -0.08
SRSF4-205ENST00000497015 EVA1CP58658 441 aa14.55□□□□□ -0.08
SRSF4-205ENST00000497015 TCP11L2Q8N4U5 519 aa14.55□□□□□ -0.08
SRSF4-205ENST00000497015 NGDNQ8NEJ9 315 aaKnown RBP14.55□□□□□ -0.08
SRSF4-205ENST00000497015 MPHOSPH9Q99550 1183 aa14.55□□□□□ -0.08
SRSF4-205ENST00000497015 SYT17Q9BSW7 474 aa14.55□□□□□ -0.08
SRSF4-205ENST00000497015 ATF5Q9Y2D1 282 aaPredicted RBP14.55□□□□□ -0.08
SRSF4-205ENST00000497015 MINK1Q8N4C8 1332 aaPredicted RBP14.55□□□□□ -0.08
SRSF4-205ENST00000497015 SSH2Q76I76 1423 aa14.55□□□□□ -0.08
SRSF4-205ENST00000497015 MSH5O43196 834 aa14.54□□□□□ -0.08
SRSF4-205ENST00000497015 TRAK1Q9UPV9 953 aa14.54□□□□□ -0.08
SRSF4-205ENST00000497015 CASZ1Q86V15 1759 aa14.52□□□□□ -0.08
SRSF4-205ENST00000497015 NRKQ7Z2Y5 1582 aa14.52□□□□□ -0.08
SRSF4-205ENST00000497015 DLC1Q96QB1 1528 aa14.52□□□□□ -0.08
SRSF4-205ENST00000497015 SGIP1Q9BQI5 828 aa14.52□□□□□ -0.09
SRSF4-205ENST00000497015 FHDC1Q9C0D6 1143 aaPredicted RBP14.52□□□□□ -0.09
SRSF4-205ENST00000497015 SLC4A2P04920 1241 aa14.5□□□□□ -0.09
SRSF4-205ENST00000497015 MAPK8IP2Q13387 824 aaPredicted RBP14.5□□□□□ -0.09
SRSF4-205ENST00000497015 TULP4Q9NRJ4 1543 aa14.5□□□□□ -0.09
SRSF4-205ENST00000497015 ADGRB1O14514 1584 aa14.49□□□□□ -0.09
SRSF4-205ENST00000497015 NUDT16Q96DE0 195 aaKnown RBP14.49□□□□□ -0.09
SRSF4-205ENST00000497015 THRAP3Q9Y2W1 955 aaKnown RBP14.49□□□□□ -0.09
SRSF4-205ENST00000497015 MYOM1P52179 1685 aa14.49□□□□□ -0.09
SRSF4-205ENST00000497015 PEAK1Q9H792 1746 aa14.48□□□□□ -0.09
SRSF4-205ENST00000497015 PHRF1Q9P1Y6 1649 aaKnown RBP14.48□□□□□ -0.09
SRSF4-205ENST00000497015 BCL11BQ9C0K0 894 aaPredicted RBP14.47□□□□□ -0.09
SRSF4-205ENST00000497015 LMO7Q8WWI1 1683 aa14.46□□□□□ -0.09
SRSF4-205ENST00000497015 MARCH10Q8NA82 808 aaPredicted RBP14.46□□□□□ -0.09
SRSF4-205ENST00000497015 CPDO75976 1380 aa14.46□□□□□ -0.1
SRSF4-205ENST00000497015 CEP350Q5VT06 3117 aa14.46□□□□□ -0.1
SRSF4-205ENST00000497015 ACEP12821 1306 aa14.45□□□□□ -0.1
SRSF4-205ENST00000497015 GCP02774 474 aa14.44□□□□□ -0.1
SRSF4-205ENST00000497015 SLC15A2Q16348 729 aa14.44□□□□□ -0.1
SRSF4-205ENST00000497015 TXNRD1Q16881 649 aa14.44□□□□□ -0.1
SRSF4-205ENST00000497015 POLR3AO14802 1390 aaPredicted RBP14.44□□□□□ -0.1
SRSF4-205ENST00000497015 ATP7BP35670 1465 aa14.44□□□□□ -0.1
SRSF4-205ENST00000497015 PARP4Q9UKK3 1724 aaKnown RBP14.44□□□□□ -0.1
SRSF4-205ENST00000497015 USP19O94966 1318 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms