RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 NINLQ9Y2I6 1382 aa26.97■■□□□ 1.91
CTDSP1-213ENST00000496785 USP6P35125 1406 aa26.96■■□□□ 1.91
CTDSP1-213ENST00000496785 NGLY1Q96IV0 654 aa26.95■■□□□ 1.9
CTDSP1-213ENST00000496785 EIF4G2P78344 907 aaKnown RBP eCLIP26.94■■□□□ 1.9
CTDSP1-213ENST00000496785 RGS17Q9UGC6 210 aaPredicted RBP26.94■■□□□ 1.9
CTDSP1-213ENST00000496785 AFF2P51816 1311 aa26.93■■□□□ 1.9
CTDSP1-213ENST00000496785 TMC1Q8TDI8 760 aa26.92■■□□□ 1.9
CTDSP1-213ENST00000496785 MARF1Q9Y4F3 1742 aaKnown RBP26.92■■□□□ 1.9
CTDSP1-213ENST00000496785 HDGFL2Q7Z4V5 671 aaPredicted RBP26.91■■□□□ 1.9
CTDSP1-213ENST00000496785 CPSF1Q10570 1443 aaKnown RBP26.9■■□□□ 1.9
CTDSP1-213ENST00000496785 ABCA3Q99758 1704 aa26.9■■□□□ 1.9
CTDSP1-213ENST00000496785 ABTB2Q8N961 1025 aa26.9■■□□□ 1.9
CTDSP1-213ENST00000496785 TERF2IPQ9NYB0 399 aa26.9■■□□□ 1.9
CTDSP1-213ENST00000496785 AKAP12Q02952 1782 aa26.89■■□□□ 1.9
CTDSP1-213ENST00000496785 KTN1Q86UP2 1357 aaKnown RBP26.89■■□□□ 1.9
CTDSP1-213ENST00000496785 CABLES1Q8TDN4 633 aa26.89■■□□□ 1.9
CTDSP1-213ENST00000496785 PLEKHG5O94827 1062 aa26.88■■□□□ 1.89
CTDSP1-213ENST00000496785 NLRP13Q86W25 1043 aa26.88■■□□□ 1.89
CTDSP1-213ENST00000496785 TTC21AQ8NDW8 1320 aa26.88■■□□□ 1.89
CTDSP1-213ENST00000496785 SSH2Q76I76 1423 aa26.86■■□□□ 1.89
CTDSP1-213ENST00000496785 FNBP4Q8N3X1 1017 aaPredicted RBP26.86■■□□□ 1.89
CTDSP1-213ENST00000496785 POTEAQ6S8J7 498 aa26.85■■□□□ 1.89
CTDSP1-213ENST00000496785 ILDR2Q71H61 639 aa26.84■■□□□ 1.89
CTDSP1-213ENST00000496785 SLC12A5Q9H2X9 1139 aa26.84■■□□□ 1.89
CTDSP1-213ENST00000496785 USP21Q9UK80 565 aa26.84■■□□□ 1.89
CTDSP1-213ENST00000496785 MON2Q7Z3U7 1717 aa26.84■■□□□ 1.89
CTDSP1-213ENST00000496785 CRYBG1Q9Y4K1 1723 aa26.83■■□□□ 1.89
CTDSP1-213ENST00000496785 HSPA5P11021 654 aaKnown RBP26.83■■□□□ 1.89
CTDSP1-213ENST00000496785 TTC21BQ7Z4L5 1316 aa26.83■■□□□ 1.89
CTDSP1-213ENST00000496785 NRKQ7Z2Y5 1582 aa26.82■■□□□ 1.88
CTDSP1-213ENST00000496785 USP19O94966 1318 aa26.82■■□□□ 1.88
CTDSP1-213ENST00000496785 CD163L1Q9NR16 1453 aa26.81■■□□□ 1.88
CTDSP1-213ENST00000496785 PHRF1Q9P1Y6 1649 aaKnown RBP26.81■■□□□ 1.88
CTDSP1-213ENST00000496785 NLRP6P59044 892 aa26.81■■□□□ 1.88
CTDSP1-213ENST00000496785 NUTM2GQ5VZR2 741 aa26.81■■□□□ 1.88
CTDSP1-213ENST00000496785 EDC4Q6P2E9 1401 aaKnown RBP26.81■■□□□ 1.88
CTDSP1-213ENST00000496785 TRPC5Q9UL62 973 aaPredicted RBP26.8■■□□□ 1.88
CTDSP1-213ENST00000496785 SLIT2O94813 1529 aa26.8■■□□□ 1.88
CTDSP1-213ENST00000496785 A0A1W2PP64 1363 aa26.79■■□□□ 1.88
CTDSP1-213ENST00000496785 RXRBP28702 533 aa26.78■■□□□ 1.88
CTDSP1-213ENST00000496785 QTRT2Q9H974 415 aaKnown RBP26.78■■□□□ 1.88
CTDSP1-213ENST00000496785 ANKRD36BQ8N2N9 1353 aa26.78■■□□□ 1.88
CTDSP1-213ENST00000496785 PIK3C2AO00443 1686 aa26.77■■□□□ 1.88
CTDSP1-213ENST00000496785 PRDM11Q9NQV5 511 aa26.77■■□□□ 1.88
CTDSP1-213ENST00000496785 COL14A1Q05707 1796 aaKnown RBP26.76■■□□□ 1.88
CTDSP1-213ENST00000496785 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.76■■□□□ 1.88
CTDSP1-213ENST00000496785 NWD2Q9ULI1 1742 aa26.76■■□□□ 1.88
CTDSP1-213ENST00000496785 BCL9LQ86UU0 1499 aa26.75■■□□□ 1.87
CTDSP1-213ENST00000496785 RBM6P78332 1123 aaKnown RBP26.75■■□□□ 1.87
CTDSP1-213ENST00000496785 UNC5CLQ8IV45 518 aa26.75■■□□□ 1.87
CTDSP1-213ENST00000496785 PLCH1Q4KWH8 1693 aa26.75■■□□□ 1.87
CTDSP1-213ENST00000496785 FAM83GA6ND36 823 aa26.74■■□□□ 1.87
CTDSP1-213ENST00000496785 GCP02774 474 aa26.74■■□□□ 1.87
CTDSP1-213ENST00000496785 ATRNO75882 1429 aa26.73■■□□□ 1.87
CTDSP1-213ENST00000496785 CPDO75976 1380 aa26.73■■□□□ 1.87
CTDSP1-213ENST00000496785 KIAA0232Q92628 1395 aa26.73■■□□□ 1.87
CTDSP1-213ENST00000496785 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.73■■□□□ 1.87
CTDSP1-213ENST00000496785 KCNH5Q8NCM2 988 aa26.73■■□□□ 1.87
CTDSP1-213ENST00000496785 SLIT3O75094 1523 aa26.73■■□□□ 1.87
CTDSP1-213ENST00000496785 CDK12Q9NYV4 1490 aaPredicted RBP26.72■■□□□ 1.87
CTDSP1-213ENST00000496785 USP31Q70CQ4 1352 aa26.71■■□□□ 1.87
CTDSP1-213ENST00000496785 ZC3H6P61129 1189 aaKnown RBP26.71■■□□□ 1.87
CTDSP1-213ENST00000496785 BTG4Q9NY30 223 aa26.68■■□□□ 1.86
CTDSP1-213ENST00000496785 MYOM1P52179 1685 aa26.67■■□□□ 1.86
CTDSP1-213ENST00000496785 USP54Q70EL1 1684 aa26.67■■□□□ 1.86
CTDSP1-213ENST00000496785 POLR3GLQ9BT43 218 aa26.67■■□□□ 1.86
CTDSP1-213ENST00000496785 VPS72Q15906 364 aa26.66■■□□□ 1.86
CTDSP1-213ENST00000496785 NME9Q86XW9 330 aa26.66■■□□□ 1.86
CTDSP1-213ENST00000496785 GJD4Q96KN9 370 aaPredicted RBP26.65■■□□□ 1.86
CTDSP1-213ENST00000496785 SOCS7O14512 581 aa26.64■■□□□ 1.86
CTDSP1-213ENST00000496785 CHRNA2Q15822 529 aa26.64■■□□□ 1.86
CTDSP1-213ENST00000496785 NRAPQ86VF7 1730 aa26.63■■□□□ 1.85
CTDSP1-213ENST00000496785 CCDC9Q9Y3X0 531 aaKnown RBP26.63■■□□□ 1.85
CTDSP1-213ENST00000496785 AATKQ6ZMQ8 1374 aa26.61■■□□□ 1.85
CTDSP1-213ENST00000496785 COG3Q96JB2 828 aa26.61■■□□□ 1.85
CTDSP1-213ENST00000496785 OVOS2A0A0J9YW53 1432 aa26.61■■□□□ 1.85
CTDSP1-213ENST00000496785 OVOS2Q6IE36 1432 aa26.61■■□□□ 1.85
CTDSP1-213ENST00000496785 ZBTB7CA1YPR0 619 aa26.59■■□□□ 1.85
CTDSP1-213ENST00000496785 LMO7Q8WWI1 1683 aa26.59■■□□□ 1.85
CTDSP1-213ENST00000496785 NFAT5O94916 1531 aa26.59■■□□□ 1.85
CTDSP1-213ENST00000496785 RGS12O14924 1447 aa26.58■■□□□ 1.85
CTDSP1-213ENST00000496785 SOX12O15370 315 aa26.58■■□□□ 1.85
CTDSP1-213ENST00000496785 EVA1CP58658 441 aa26.58■■□□□ 1.85
CTDSP1-213ENST00000496785 ZRANB1Q9UGI0 708 aa26.58■■□□□ 1.85
CTDSP1-213ENST00000496785 NSD3Q9BZ95 1437 aa26.57■■□□□ 1.84
CTDSP1-213ENST00000496785 ABCC6O95255 1503 aa26.57■■□□□ 1.84
CTDSP1-213ENST00000496785 ARHGEF25Q86VW2 580 aa26.57■■□□□ 1.84
CTDSP1-213ENST00000496785 GLI3P10071 1580 aa26.56■■□□□ 1.84
CTDSP1-213ENST00000496785 STRN4Q9NRL3 753 aa26.56■■□□□ 1.84
CTDSP1-213ENST00000496785 CAMTA1Q9Y6Y1 1673 aa26.55■■□□□ 1.84
CTDSP1-213ENST00000496785 FYB1O15117 783 aa26.53■■□□□ 1.84
CTDSP1-213ENST00000496785 CGNL1Q0VF96 1302 aa26.53■■□□□ 1.84
CTDSP1-213ENST00000496785 SPATA31A5Q5VU36 1347 aa26.53■■□□□ 1.84
CTDSP1-213ENST00000496785 SPATA31A7Q8IWB4 1347 aa26.53■■□□□ 1.84
CTDSP1-213ENST00000496785 KIF20BQ96Q89 1820 aa26.53■■□□□ 1.84
CTDSP1-213ENST00000496785 C11orf95C9JLR9 678 aaPredicted RBP26.52■■□□□ 1.84
CTDSP1-213ENST00000496785 COL5A2P05997 1499 aaPredicted RBP26.52■■□□□ 1.84
CTDSP1-213ENST00000496785 KIF7Q2M1P5 1343 aa26.52■■□□□ 1.84
CTDSP1-213ENST00000496785 CARD14Q9BXL6 1004 aa26.52■■□□□ 1.84
CTDSP1-213ENST00000496785 GGNBP2Q9H3C7 697 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 224.5 ms