RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 VSIG10Q8N0Z9 540 aa9.32□□□□□ -0.92
CLK1-214ENST00000496205 KLF16Q9BXK1 252 aaPredicted RBP9.32□□□□□ -0.92
CLK1-214ENST00000496205 SOBPA7XYQ1 873 aa9.31□□□□□ -0.92
CLK1-214ENST00000496205 TIMP2P16035 220 aa9.31□□□□□ -0.92
CLK1-214ENST00000496205 TTLL12Q14166 644 aaPredicted RBP9.31□□□□□ -0.92
CLK1-214ENST00000496205 MRPL14Q6P1L8 145 aaKnown RBP9.31□□□□□ -0.92
CLK1-214ENST00000496205 PLEKHG3A1L390 1219 aa9.3□□□□□ -0.92
CLK1-214ENST00000496205 WDR4P57081 412 aaKnown RBP9.3□□□□□ -0.92
CLK1-214ENST00000496205 PURBQ96QR8 312 aaKnown RBP9.3□□□□□ -0.92
CLK1-214ENST00000496205 PCDHB15Q9Y5E8 787 aa9.3□□□□□ -0.92
CLK1-214ENST00000496205 SPDYE5A6NIY4 337 aa9.29□□□□□ -0.92
CLK1-214ENST00000496205 AMHR2Q16671 573 aa9.29□□□□□ -0.92
CLK1-214ENST00000496205 LYPD8Q6UX82 237 aa9.29□□□□□ -0.92
CLK1-214ENST00000496205 GIGYF2Q6Y7W6 1299 aaKnown RBP9.29□□□□□ -0.92
CLK1-214ENST00000496205 BARGINQ6ZT62 677 aa9.29□□□□□ -0.92
CLK1-214ENST00000496205 BEGAINQ9BUH8 593 aa9.29□□□□□ -0.92
CLK1-214ENST00000496205 FAM181BA6NEQ2 426 aa9.28□□□□□ -0.92
CLK1-214ENST00000496205 CFAP99D6REC4 459 aa9.28□□□□□ -0.92
CLK1-214ENST00000496205 ADH1CP00326 375 aa9.28□□□□□ -0.92
CLK1-214ENST00000496205 CTHP32929 405 aa9.28□□□□□ -0.92
CLK1-214ENST00000496205 FOXJ1Q92949 421 aa9.28□□□□□ -0.92
CLK1-214ENST00000496205 ZMYND10O75800 440 aa9.27□□□□□ -0.93
CLK1-214ENST00000496205 TBC1D2Q9BYX2 928 aa9.27□□□□□ -0.93
CLK1-214ENST00000496205 RSBN1LQ6PCB5 846 aaPredicted RBP9.26□□□□□ -0.93
CLK1-214ENST00000496205 MAP10Q9P2G4 905 aa9.26□□□□□ -0.93
CLK1-214ENST00000496205 SCARF1Q14162 830 aa9.25□□□□□ -0.93
CLK1-214ENST00000496205 FAM174AQ8TBP5 190 aa9.25□□□□□ -0.93
CLK1-214ENST00000496205 CDK15Q96Q40 435 aa9.25□□□□□ -0.93
CLK1-214ENST00000496205 ZFAND3Q9H8U3 227 aa9.25□□□□□ -0.93
CLK1-214ENST00000496205 F12P00748 615 aaPredicted RBP9.24□□□□□ -0.93
CLK1-214ENST00000496205 HRCP23327 699 aa9.24□□□□□ -0.93
CLK1-214ENST00000496205 GJA5P36382 358 aa9.24□□□□□ -0.93
CLK1-214ENST00000496205 ARID5BQ14865 1188 aa9.24□□□□□ -0.93
CLK1-214ENST00000496205 C4orf48Q5BLP8 95 aa9.24□□□□□ -0.93
CLK1-214ENST00000496205 SPTLC1O15269 473 aa9.23□□□□□ -0.93
CLK1-214ENST00000496205 NR3C2P08235 984 aa9.23□□□□□ -0.93
CLK1-214ENST00000496205 ITPKCQ96DU7 683 aa9.23□□□□□ -0.93
CLK1-214ENST00000496205 ZIC2O95409 532 aaPredicted RBP9.22□□□□□ -0.93
CLK1-214ENST00000496205 GRM5P41594 1212 aa9.22□□□□□ -0.93
CLK1-214ENST00000496205 ZC3H15Q8WU90 426 aaKnown RBP9.22□□□□□ -0.93
CLK1-214ENST00000496205 PER1O15534 1290 aaPredicted RBP9.21□□□□□ -0.94
CLK1-214ENST00000496205 VSIG8P0DPA2 414 aa9.21□□□□□ -0.94
CLK1-214ENST00000496205 PARP9Q8IXQ6 854 aa9.21□□□□□ -0.94
CLK1-214ENST00000496205 CABLES1Q8TDN4 633 aa9.21□□□□□ -0.94
CLK1-214ENST00000496205 C6orf118Q5T5N4 469 aa9.2□□□□□ -0.94
CLK1-214ENST00000496205 ZBTB3Q9H5J0 574 aa9.19□□□□□ -0.94
CLK1-214ENST00000496205 NR5A1Q13285 461 aa9.18□□□□□ -0.94
CLK1-214ENST00000496205 CSPP1Q1MSJ5 1256 aa9.18□□□□□ -0.94
CLK1-214ENST00000496205 RIC3Q7Z5B4 369 aa9.18□□□□□ -0.94
CLK1-214ENST00000496205 MAN1A2O60476 641 aa9.17□□□□□ -0.94
CLK1-214ENST00000496205 AGERQ15109 404 aa9.17□□□□□ -0.94
CLK1-214ENST00000496205 DIXDC1Q155Q3 683 aa9.17□□□□□ -0.94
CLK1-214ENST00000496205 TRIM66O15016 1216 aa9.16□□□□□ -0.94
CLK1-214ENST00000496205 PPFIA3O75145 1194 aa9.16□□□□□ -0.94
CLK1-214ENST00000496205 PRPF38BQ5VTL8 546 aaKnown RBP9.16□□□□□ -0.94
CLK1-214ENST00000496205 BPHLQ86WA6 291 aaPredicted RBP9.15□□□□□ -0.94
CLK1-214ENST00000496205 BMP2P12643 396 aa9.14□□□□□ -0.95
CLK1-214ENST00000496205 QPCTQ16769 361 aa9.14□□□□□ -0.95
CLK1-214ENST00000496205 MEIOBQ8N635 442 aa9.14□□□□□ -0.95
CLK1-214ENST00000496205 LIMD1Q9UGP4 676 aa9.14□□□□□ -0.95
CLK1-214ENST00000496205 LINC00528Q8N1L1 170 aa9.13□□□□□ -0.95
CLK1-214ENST00000496205 C1QTNF2Q9BXJ5 285 aa9.13□□□□□ -0.95
CLK1-214ENST00000496205 DNMT3LQ9UJW3 386 aa9.13□□□□□ -0.95
CLK1-214ENST00000496205 SOS2Q07890 1332 aaPredicted RBP9.12□□□□□ -0.95
CLK1-214ENST00000496205 SH3RF1Q7Z6J0 888 aa9.12□□□□□ -0.95
CLK1-214ENST00000496205 TSC1Q92574 1164 aa9.12□□□□□ -0.95
CLK1-214ENST00000496205 LOC100996750A0A140TA64 210 aa9.11□□□□□ -0.95
CLK1-214ENST00000496205 KRTAP4-6Q9BYQ5 205 aa9.11□□□□□ -0.95
CLK1-214ENST00000496205 FSHRP23945 695 aa9.1□□□□□ -0.95
CLK1-214ENST00000496205 GSK3AP49840 483 aa9.1□□□□□ -0.95
CLK1-214ENST00000496205 MYSM1Q5VVJ2 828 aa9.1□□□□□ -0.95
CLK1-214ENST00000496205 GPR161Q8N6U8 529 aaKnown RBP9.1□□□□□ -0.95
CLK1-214ENST00000496205 NUTM2BA6NNL0 878 aaPredicted RBP9.09□□□□□ -0.95
CLK1-214ENST00000496205 NUTM2EB1AL46 878 aaPredicted RBP9.09□□□□□ -0.95
CLK1-214ENST00000496205 LILRB3O75022 631 aa9.09□□□□□ -0.95
CLK1-214ENST00000496205 UPP2O95045 317 aa9.09□□□□□ -0.95
CLK1-214ENST00000496205 KRT76Q01546 638 aa9.09□□□□□ -0.95
CLK1-214ENST00000496205 NUTM2DQ5VT03 806 aaPredicted RBP9.09□□□□□ -0.95
CLK1-214ENST00000496205 SH3BP5LQ7L8J4 393 aa9.09□□□□□ -0.95
CLK1-214ENST00000496205 NUTM2AQ8IVF1 878 aaPredicted RBP9.09□□□□□ -0.95
CLK1-214ENST00000496205 RTL5Q5HYW3 569 aaPredicted RBP9.08□□□□□ -0.96
CLK1-214ENST00000496205 AK7Q96M32 723 aa9.08□□□□□ -0.96
CLK1-214ENST00000496205 MAP4K5Q9Y4K4 846 aa9.08□□□□□ -0.96
CLK1-214ENST00000496205 VASH1Q7L8A9 365 aaPredicted RBP9.07□□□□□ -0.96
CLK1-214ENST00000496205 TRMT44Q8IYL2 757 aaKnown RBP9.07□□□□□ -0.96
CLK1-214ENST00000496205 MAGEB6P1A0A0J9YX57 407 aa9.06□□□□□ -0.96
CLK1-214ENST00000496205 KCNMA1Q12791 1236 aa9.06□□□□□ -0.96
CLK1-214ENST00000496205 TUSC1Q2TAM9 212 aa9.06□□□□□ -0.96
CLK1-214ENST00000496205 ARMC2Q8NEN0 867 aa9.06□□□□□ -0.96
CLK1-214ENST00000496205 TSEN34Q9BSV6 310 aaKnown RBP9.06□□□□□ -0.96
CLK1-214ENST00000496205 EMILIN1Q9Y6C2 1016 aa9.05□□□□□ -0.96
CLK1-214ENST00000496205 FIGNL2A6NMB9 653 aa9.04□□□□□ -0.96
CLK1-214ENST00000496205 CBLBQ13191 982 aa9.04□□□□□ -0.96
CLK1-214ENST00000496205 NBPF14Q5TI25 921 aa9.04□□□□□ -0.96
CLK1-214ENST00000496205 CCDC116Q8IYX3 515 aa9.04□□□□□ -0.96
CLK1-214ENST00000496205 KCTD17Q8N5Z5 321 aa9.04□□□□□ -0.96
CLK1-214ENST00000496205 CARD14Q9BXL6 1004 aa9.04□□□□□ -0.96
CLK1-214ENST00000496205 TTLL8A6PVC2 850 aa9.03□□□□□ -0.96
CLK1-214ENST00000496205 PTSQ03393 145 aa9.03□□□□□ -0.96
CLK1-214ENST00000496205 PDE4DQ08499 809 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms