RNA–Protein interactions for RNA: ENST00000495645.5

CHPF2-204, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 2 BASIC

Gene CHPF2, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-204ENST00000495645 NINLQ9Y2I6 1382 aa19.55■□□□□ 0.72
CHPF2-204ENST00000495645 ZNF142P52746 1687 aaPredicted RBP19.55■□□□□ 0.72
CHPF2-204ENST00000495645 PPP4R2Q9NY27 417 aa19.55■□□□□ 0.72
CHPF2-204ENST00000495645 CFAP53Q96M91 514 aa19.54■□□□□ 0.72
CHPF2-204ENST00000495645 GOLGA2Q08379 1002 aa19.54■□□□□ 0.72
CHPF2-204ENST00000495645 HSPA2P54652 639 aa19.53■□□□□ 0.72
CHPF2-204ENST00000495645 CPSF1Q10570 1443 aaKnown RBP19.53■□□□□ 0.72
CHPF2-204ENST00000495645 HMOX1P09601 288 aa19.53■□□□□ 0.72
CHPF2-204ENST00000495645 SIRT1Q96EB6 747 aa19.53■□□□□ 0.72
CHPF2-204ENST00000495645 C20orf194Q5TEA3 1177 aa19.53■□□□□ 0.72
CHPF2-204ENST00000495645 WWC1Q8IX03 1113 aa19.52■□□□□ 0.72
CHPF2-204ENST00000495645 SETD1BQ9UPS6 1966 aaKnown RBP19.52■□□□□ 0.72
CHPF2-204ENST00000495645 NKTRP30414 1462 aaKnown RBP19.51■□□□□ 0.71
CHPF2-204ENST00000495645 RRP1P56182 461 aaKnown RBP19.51■□□□□ 0.71
CHPF2-204ENST00000495645 PDE3BQ13370 1112 aa19.51■□□□□ 0.71
CHPF2-204ENST00000495645 NSD2O96028 1365 aa19.51■□□□□ 0.71
CHPF2-204ENST00000495645 EXOC6Q8TAG9 804 aa19.51■□□□□ 0.71
CHPF2-204ENST00000495645 RNF123Q5XPI4 1314 aa19.5■□□□□ 0.71
CHPF2-204ENST00000495645 SHPRHQ149N8 1683 aa19.5■□□□□ 0.71
CHPF2-204ENST00000495645 SLFN5Q08AF3 891 aa19.5■□□□□ 0.71
CHPF2-204ENST00000495645 RUNDC1Q96C34 613 aa19.5■□□□□ 0.71
CHPF2-204ENST00000495645 NGDNQ8NEJ9 315 aaKnown RBP19.49■□□□□ 0.71
CHPF2-204ENST00000495645 COG3Q96JB2 828 aa19.48■□□□□ 0.71
CHPF2-204ENST00000495645 TTC21BQ7Z4L5 1316 aa19.48■□□□□ 0.71
CHPF2-204ENST00000495645 USP32Q8NFA0 1604 aa19.48■□□□□ 0.71
CHPF2-204ENST00000495645 DIAPH1O60610 1272 aaKnown RBP19.47■□□□□ 0.71
CHPF2-204ENST00000495645 PRKCSHP14314 528 aaPredicted RBP19.47■□□□□ 0.71
CHPF2-204ENST00000495645 BCAR3O75815 825 aa19.46■□□□□ 0.71
CHPF2-204ENST00000495645 XPCQ01831 940 aaPredicted RBP19.46■□□□□ 0.71
CHPF2-204ENST00000495645 EDC4Q6P2E9 1401 aaKnown RBP19.46■□□□□ 0.71
CHPF2-204ENST00000495645 LMTK3Q96Q04 1460 aa19.46■□□□□ 0.71
CHPF2-204ENST00000495645 C14orf37Q86TY3 774 aa19.46■□□□□ 0.71
CHPF2-204ENST00000495645 PHACTR3Q96KR7 559 aa19.45■□□□□ 0.7
CHPF2-204ENST00000495645 INSRP06213 1382 aa19.44■□□□□ 0.7
CHPF2-204ENST00000495645 PAK3O75914 559 aaPredicted RBP19.44■□□□□ 0.7
CHPF2-204ENST00000495645 PLEKHF1Q96S99 279 aa19.44■□□□□ 0.7
CHPF2-204ENST00000495645 PLEKHG3A1L390 1219 aa19.44■□□□□ 0.7
CHPF2-204ENST00000495645 KNDC1Q76NI1 1749 aa19.44■□□□□ 0.7
CHPF2-204ENST00000495645 TSR2Q969E8 191 aaKnown RBP19.43■□□□□ 0.7
CHPF2-204ENST00000495645 BCL2L13Q9BXK5 485 aa19.43■□□□□ 0.7
CHPF2-204ENST00000495645 AEBP2Q6ZN18 517 aaPredicted RBP19.43■□□□□ 0.7
CHPF2-204ENST00000495645 THUMPD2Q9BTF0 503 aaKnown RBP19.43■□□□□ 0.7
CHPF2-204ENST00000495645 COL3A1P02461 1466 aaPredicted RBP19.43■□□□□ 0.7
CHPF2-204ENST00000495645 PRKAR2BP31323 418 aa19.42■□□□□ 0.7
CHPF2-204ENST00000495645 HSP90AB2PQ58FF8 381 aa19.42■□□□□ 0.7
CHPF2-204ENST00000495645 ERICH6Q7L0X2 663 aa19.42■□□□□ 0.7
CHPF2-204ENST00000495645 ZNF692Q9BU19 519 aaPredicted RBP19.42■□□□□ 0.7
CHPF2-204ENST00000495645 CDC42BPGQ6DT37 1551 aa19.42■□□□□ 0.7
CHPF2-204ENST00000495645 SKAP1Q86WV1 359 aa19.41■□□□□ 0.7
CHPF2-204ENST00000495645 AEBP1Q8IUX7 1158 aa19.41■□□□□ 0.7
CHPF2-204ENST00000495645 RGPD8O14715 1765 aaPredicted RBP19.4■□□□□ 0.7
CHPF2-204ENST00000495645 TRMT2AQ8IZ69 625 aaKnown RBP19.4■□□□□ 0.7
CHPF2-204ENST00000495645 FANCIQ9NVI1 1328 aa19.4■□□□□ 0.7
CHPF2-204ENST00000495645 USP6P35125 1406 aa19.4■□□□□ 0.7
CHPF2-204ENST00000495645 PTCH1Q13635 1447 aa19.4■□□□□ 0.7
CHPF2-204ENST00000495645 TMPOP42166 694 aaKnown RBP19.39■□□□□ 0.7
CHPF2-204ENST00000495645 ORAI2Q96SN7 254 aa19.39■□□□□ 0.7
CHPF2-204ENST00000495645 CRBNQ96SW2 442 aa19.39■□□□□ 0.7
CHPF2-204ENST00000495645 CCDC136Q96JN2 1154 aa19.39■□□□□ 0.69
CHPF2-204ENST00000495645 PNPLA6Q8IY17 1366 aa19.39■□□□□ 0.69
CHPF2-204ENST00000495645 ESCO1Q5FWF5 840 aa19.38■□□□□ 0.69
CHPF2-204ENST00000495645 TRIM35Q9UPQ4 493 aa19.38■□□□□ 0.69
CHPF2-204ENST00000495645 DIP2AQ14689 1571 aa19.38■□□□□ 0.69
CHPF2-204ENST00000495645 IL13P35225 146 aa19.38■□□□□ 0.69
CHPF2-204ENST00000495645 RIPK4P57078 832 aa19.38■□□□□ 0.69
CHPF2-204ENST00000495645 NPHP4O75161 1426 aaPredicted RBP19.37■□□□□ 0.69
CHPF2-204ENST00000495645 E9PSI1 815 aa19.37■□□□□ 0.69
CHPF2-204ENST00000495645 NLRP6P59044 892 aa19.37■□□□□ 0.69
CHPF2-204ENST00000495645 TNNQ9UQP3 1299 aa19.37■□□□□ 0.69
CHPF2-204ENST00000495645 MAPK8IP3Q9UPT6 1336 aa19.36■□□□□ 0.69
CHPF2-204ENST00000495645 RSPH6AQ9H0K4 717 aa19.36■□□□□ 0.69
CHPF2-204ENST00000495645 IQSEC2Q5JU85 1478 aa19.36■□□□□ 0.69
CHPF2-204ENST00000495645 FOXO3O43524 673 aa19.36■□□□□ 0.69
CHPF2-204ENST00000495645 DDX17Q92841 729 aaKnown RBP19.36■□□□□ 0.69
CHPF2-204ENST00000495645 KIF20BQ96Q89 1820 aa19.35■□□□□ 0.69
CHPF2-204ENST00000495645 PHF23Q9BUL5 403 aaPredicted RBP19.35■□□□□ 0.69
CHPF2-204ENST00000495645 MAP2P11137 1827 aaKnown RBP19.35■□□□□ 0.69
CHPF2-204ENST00000495645 ZBTB7CA1YPR0 619 aa19.34■□□□□ 0.69
CHPF2-204ENST00000495645 FAM83GA6ND36 823 aa19.34■□□□□ 0.69
CHPF2-204ENST00000495645 DCTN1Q14203 1278 aa19.34■□□□□ 0.69
CHPF2-204ENST00000495645 ERICH6BQ5W0A0 696 aa19.34■□□□□ 0.69
CHPF2-204ENST00000495645 LAS1LQ9Y4W2 734 aaKnown RBP19.34■□□□□ 0.69
CHPF2-204ENST00000495645 XRN1Q8IZH2 1706 aaKnown RBP19.34■□□□□ 0.69
CHPF2-204ENST00000495645 EIF4A2Q14240 407 aaKnown RBP19.34■□□□□ 0.69
CHPF2-204ENST00000495645 PROSER2Q86WR7 435 aaPredicted RBP19.34■□□□□ 0.69
CHPF2-204ENST00000495645 ABTB2Q8N961 1025 aa19.34■□□□□ 0.69
CHPF2-204ENST00000495645 MAP3K19Q56UN5 1328 aa19.33■□□□□ 0.68
CHPF2-204ENST00000495645 FRAT1Q92837 279 aaPredicted RBP19.33■□□□□ 0.68
CHPF2-204ENST00000495645 ADGRB2O60241 1585 aa19.32■□□□□ 0.68
CHPF2-204ENST00000495645 LMOD2Q6P5Q4 547 aa19.32■□□□□ 0.68
CHPF2-204ENST00000495645 PHF8Q9UPP1 1060 aa19.32■□□□□ 0.68
CHPF2-204ENST00000495645 LTV1Q96GA3 475 aaPredicted RBP19.32■□□□□ 0.68
CHPF2-204ENST00000495645 SULT6B1Q6IMI4 303 aa19.31■□□□□ 0.68
CHPF2-204ENST00000495645 SSH2Q76I76 1423 aa19.31■□□□□ 0.68
CHPF2-204ENST00000495645 MON2Q7Z3U7 1717 aa19.3■□□□□ 0.68
CHPF2-204ENST00000495645 ANKRD26Q9UPS8 1709 aa19.3■□□□□ 0.68
CHPF2-204ENST00000495645 STRCQ7RTU9 1775 aa19.3■□□□□ 0.68
CHPF2-204ENST00000495645 OVOS2A0A0J9YW53 1432 aa19.3■□□□□ 0.68
CHPF2-204ENST00000495645 OVOS2Q6IE36 1432 aa19.3■□□□□ 0.68
CHPF2-204ENST00000495645 FCHSD2O94868 740 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms