RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 PDE4DQ08499 809 aa9.03□□□□□ -0.96
RBM39-240ENST00000495293 NFX1Q12986 1120 aaKnown RBP9.03□□□□□ -0.96
RBM39-240ENST00000495293 MAP10Q9P2G4 905 aa9.03□□□□□ -0.96
RBM39-240ENST00000495293 BMP1P13497 986 aa9.02□□□□□ -0.97
RBM39-240ENST00000495293 QPCTQ16769 361 aa9.02□□□□□ -0.97
RBM39-240ENST00000495293 CSPP1Q1MSJ5 1256 aa9.02□□□□□ -0.97
RBM39-240ENST00000495293 MYSM1Q5VVJ2 828 aa9.02□□□□□ -0.97
RBM39-240ENST00000495293 LYPD8Q6UX82 237 aa9.02□□□□□ -0.97
RBM39-240ENST00000495293 ZNF511Q8NB15 262 aa9.02□□□□□ -0.97
RBM39-240ENST00000495293 TRIM47Q96LD4 638 aa9.02□□□□□ -0.97
RBM39-240ENST00000495293 SPDYE5A6NIY4 337 aa9.01□□□□□ -0.97
RBM39-240ENST00000495293 F12P00748 615 aaPredicted RBP9.01□□□□□ -0.97
RBM39-240ENST00000495293 TRIM46Q7Z4K8 759 aa9.01□□□□□ -0.97
RBM39-240ENST00000495293 RIC3Q7Z5B4 369 aa9.01□□□□□ -0.97
RBM39-240ENST00000495293 LOC100996750A0A140TA64 210 aa9□□□□□ -0.97
RBM39-240ENST00000495293 KRTAP4-6Q9BYQ5 205 aa9□□□□□ -0.97
RBM39-240ENST00000495293 ZBTB3Q9H5J0 574 aa8.99□□□□□ -0.97
RBM39-240ENST00000495293 INSM1Q01101 510 aaPredicted RBP8.98□□□□□ -0.97
RBM39-240ENST00000495293 C4orf48Q5BLP8 95 aa8.98□□□□□ -0.97
RBM39-240ENST00000495293 FOXJ1Q92949 421 aa8.98□□□□□ -0.97
RBM39-240ENST00000495293 CTHP32929 405 aa8.96□□□□□ -0.98
RBM39-240ENST00000495293 DIXDC1Q155Q3 683 aa8.96□□□□□ -0.98
RBM39-240ENST00000495293 PRPF38BQ5VTL8 546 aaKnown RBP8.96□□□□□ -0.98
RBM39-240ENST00000495293 FBXO31Q5XUX0 539 aaPredicted RBP8.96□□□□□ -0.98
RBM39-240ENST00000495293 WASF2Q9Y6W5 498 aa8.96□□□□□ -0.98
RBM39-240ENST00000495293 CAPN5O15484 640 aaPredicted RBP8.95□□□□□ -0.98
RBM39-240ENST00000495293 LILRB3O75022 631 aa8.95□□□□□ -0.98
RBM39-240ENST00000495293 RTL5Q5HYW3 569 aaPredicted RBP8.94□□□□□ -0.98
RBM39-240ENST00000495293 VARSP26640 1264 aaKnown RBP8.93□□□□□ -0.98
RBM39-240ENST00000495293 NNTQ13423 1086 aa8.93□□□□□ -0.98
RBM39-240ENST00000495293 KLF16Q9BXK1 252 aaPredicted RBP8.93□□□□□ -0.98
RBM39-240ENST00000495293 SENP2Q9HC62 589 aa8.93□□□□□ -0.98
RBM39-240ENST00000495293 TERTO14746 1132 aaKnown RBP8.92□□□□□ -0.98
RBM39-240ENST00000495293 MPNDQ8N594 471 aa8.92□□□□□ -0.98
RBM39-240ENST00000495293 TIMP2P16035 220 aa8.91□□□□□ -0.98
RBM39-240ENST00000495293 TUSC1Q2TAM9 212 aa8.91□□□□□ -0.98
RBM39-240ENST00000495293 TSC1Q92574 1164 aa8.91□□□□□ -0.98
RBM39-240ENST00000495293 NR3C2P08235 984 aa8.89□□□□□ -0.99
RBM39-240ENST00000495293 CLK2P49760 499 aaKnown RBP8.89□□□□□ -0.99
RBM39-240ENST00000495293 KIFC2Q96AC6 838 aa8.89□□□□□ -0.99
RBM39-240ENST00000495293 ZFP42Q96MM3 310 aa8.89□□□□□ -0.99
RBM39-240ENST00000495293 CDK15Q96Q40 435 aa8.89□□□□□ -0.99
RBM39-240ENST00000495293 POLR3EQ9NVU0 708 aa8.89□□□□□ -0.99
RBM39-240ENST00000495293 NUTM2BA6NNL0 878 aaPredicted RBP8.88□□□□□ -0.99
RBM39-240ENST00000495293 NUTM2EB1AL46 878 aaPredicted RBP8.88□□□□□ -0.99
RBM39-240ENST00000495293 ADH1CP00326 375 aa8.88□□□□□ -0.99
RBM39-240ENST00000495293 GRM5P41594 1212 aa8.88□□□□□ -0.99
RBM39-240ENST00000495293 NUTM2DQ5VT03 806 aaPredicted RBP8.88□□□□□ -0.99
RBM39-240ENST00000495293 NUTM2AQ8IVF1 878 aaPredicted RBP8.88□□□□□ -0.99
RBM39-240ENST00000495293 ZFAND3Q9H8U3 227 aa8.88□□□□□ -0.99
RBM39-240ENST00000495293 GPBP1L1Q9HC44 474 aaPredicted RBP8.88□□□□□ -0.99
RBM39-240ENST00000495293 VEGFBP49765 207 aa8.87□□□□□ -0.99
RBM39-240ENST00000495293 WDR4P57081 412 aaKnown RBP8.87□□□□□ -0.99
RBM39-240ENST00000495293 SH3RF1Q7Z6J0 888 aa8.87□□□□□ -0.99
RBM39-240ENST00000495293 FAM174AQ8TBP5 190 aa8.87□□□□□ -0.99
RBM39-240ENST00000495293 SOBPA7XYQ1 873 aa8.86□□□□□ -0.99
RBM39-240ENST00000495293 C1QTNF2Q9BXJ5 285 aa8.86□□□□□ -0.99
RBM39-240ENST00000495293 PLEKHG3A1L390 1219 aa8.85□□□□□ -0.99
RBM39-240ENST00000495293 ARID5BQ14865 1188 aa8.85□□□□□ -0.99
RBM39-240ENST00000495293 MRPL14Q6P1L8 145 aaKnown RBP8.85□□□□□ -0.99
RBM39-240ENST00000495293 SH3BP5LQ7L8J4 393 aa8.85□□□□□ -0.99
RBM39-240ENST00000495293 ITPKCQ96DU7 683 aa8.85□□□□□ -0.99
RBM39-240ENST00000495293 BCANQ96GW7 911 aa8.85□□□□□ -0.99
RBM39-240ENST00000495293 CTDSPL2Q05D32 466 aa8.84□□□□□ -0.99
RBM39-240ENST00000495293 PURBQ96QR8 312 aaKnown RBP8.84□□□□□ -0.99
RBM39-240ENST00000495293 PROCA1Q8NCQ7 364 aaPredicted RBP8.83□□□□□ -1
RBM39-240ENST00000495293 FAM117AQ9C073 453 aa8.83□□□□□ -1
RBM39-240ENST00000495293 NXF1Q9UBU9 619 aaKnown RBP8.83□□□□□ -1
RBM39-240ENST00000495293 ZIC2O95409 532 aaPredicted RBP8.82□□□□□ -1
RBM39-240ENST00000495293 LORP23490 312 aaPredicted RBP8.82□□□□□ -1
RBM39-240ENST00000495293 AGERQ15109 404 aa8.82□□□□□ -1
RBM39-240ENST00000495293 LRRN4Q8WUT4 740 aa8.82□□□□□ -1
RBM39-240ENST00000495293 RB1CC1Q8TDY2 1594 aa8.82□□□□□ -1
RBM39-240ENST00000495293 ERBB4Q15303 1308 aa8.81□□□□□ -1
RBM39-240ENST00000495293 BPHLQ86WA6 291 aaPredicted RBP8.81□□□□□ -1
RBM39-240ENST00000495293 KDM4CQ9H3R0 1056 aa8.81□□□□□ -1
RBM39-240ENST00000495293 HELBQ8NG08 1087 aaPredicted RBP8.8□□□□□ -1
RBM39-240ENST00000495293 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.8□□□□□ -1
RBM39-240ENST00000495293 NACADO15069 1562 aa8.79□□□□□ -1
RBM39-240ENST00000495293 FSHRP23945 695 aa8.79□□□□□ -1
RBM39-240ENST00000495293 GMPRP36959 345 aa8.79□□□□□ -1
RBM39-240ENST00000495293 NR5A1Q13285 461 aa8.79□□□□□ -1
RBM39-240ENST00000495293 OCSTAMPQ9BR26 566 aa8.79□□□□□ -1
RBM39-240ENST00000495293 MAGEB6P1A0A0J9YX57 407 aa8.78□□□□□ -1
RBM39-240ENST00000495293 H3BM21 787 aa8.78□□□□□ -1
RBM39-240ENST00000495293 TRMT44Q8IYL2 757 aaKnown RBP8.78□□□□□ -1
RBM39-240ENST00000495293 RSPH6AQ9H0K4 717 aa8.78□□□□□ -1
RBM39-240ENST00000495293 SKIV2LQ15477 1246 aaKnown RBP8.77□□□□□ -1.01
RBM39-240ENST00000495293 ERFEQ4G0M1 354 aa8.77□□□□□ -1.01
RBM39-240ENST00000495293 C6orf118Q5T5N4 469 aa8.77□□□□□ -1.01
RBM39-240ENST00000495293 CARD14Q9BXL6 1004 aa8.77□□□□□ -1.01
RBM39-240ENST00000495293 FAM181BA6NEQ2 426 aa8.76□□□□□ -1.01
RBM39-240ENST00000495293 SH3D19Q5HYK7 790 aa8.76□□□□□ -1.01
RBM39-240ENST00000495293 NBPF14Q5TI25 921 aa8.76□□□□□ -1.01
RBM39-240ENST00000495293 MEIOBQ8N635 442 aa8.76□□□□□ -1.01
RBM39-240ENST00000495293 EPS8L1Q8TE68 723 aa8.76□□□□□ -1.01
RBM39-240ENST00000495293 MAP4K5Q9Y4K4 846 aa8.76□□□□□ -1.01
RBM39-240ENST00000495293 NR6A1Q15406 480 aa8.75□□□□□ -1.01
RBM39-240ENST00000495293 ARMC2Q8NEN0 867 aa8.75□□□□□ -1.01
RBM39-240ENST00000495293 HMX1Q9NP08 348 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms