RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 PDE4DQ08499 809 aa5.87□□□□□ -1.47
LRIF1-203ENST00000494675 DXOO77932 396 aaKnown RBP5.87□□□□□ -1.47
LRIF1-203ENST00000494675 AMHR2Q16671 573 aa5.87□□□□□ -1.47
LRIF1-203ENST00000494675 TMEM132AQ24JP5 1023 aa5.87□□□□□ -1.47
LRIF1-203ENST00000494675 FAM217BQ9NTX9 383 aaPredicted RBP5.87□□□□□ -1.47
LRIF1-203ENST00000494675 TRIM32Q13049 653 aa5.86□□□□□ -1.47
LRIF1-203ENST00000494675 REPIN1Q9BWE0 567 aaKnown RBP5.86□□□□□ -1.47
LRIF1-203ENST00000494675 HOXA2O43364 376 aa5.86□□□□□ -1.47
LRIF1-203ENST00000494675 JUNDP17535 347 aa5.86□□□□□ -1.47
LRIF1-203ENST00000494675 SSTR3P32745 418 aaPredicted RBP5.86□□□□□ -1.47
LRIF1-203ENST00000494675 TTLL12Q14166 644 aaPredicted RBP5.86□□□□□ -1.47
LRIF1-203ENST00000494675 KRTAP19-1Q8IUB9 90 aa5.86□□□□□ -1.47
LRIF1-203ENST00000494675 GPBP1L1Q9HC44 474 aaPredicted RBP5.86□□□□□ -1.47
LRIF1-203ENST00000494675 KDM4CQ9H3R0 1056 aa5.84□□□□□ -1.48
LRIF1-203ENST00000494675 WNT7BP56706 349 aa5.83□□□□□ -1.48
LRIF1-203ENST00000494675 RETREG3Q86VR2 466 aa5.83□□□□□ -1.48
LRIF1-203ENST00000494675 HLA-CQ95604 372 aa5.83□□□□□ -1.48
LRIF1-203ENST00000494675 FDX1P10109 184 aa5.82□□□□□ -1.48
LRIF1-203ENST00000494675 VEGFBP49765 207 aa5.82□□□□□ -1.48
LRIF1-203ENST00000494675 RC3H1Q5TC82 1133 aaKnown RBP5.82□□□□□ -1.48
LRIF1-203ENST00000494675 GIGYF2Q6Y7W6 1299 aaKnown RBP5.82□□□□□ -1.48
LRIF1-203ENST00000494675 KRTAP4-9Q9BYQ8 210 aa5.82□□□□□ -1.48
LRIF1-203ENST00000494675 C6orf229H3BNL8 230 aa5.82□□□□□ -1.48
LRIF1-203ENST00000494675 GUCA2AQ02747 115 aa5.82□□□□□ -1.48
LRIF1-203ENST00000494675 PARP9Q8IXQ6 854 aa5.81□□□□□ -1.48
LRIF1-203ENST00000494675 IL27Q8NEV9 243 aa5.81□□□□□ -1.48
LRIF1-203ENST00000494675 SYMPKQ92797 1274 aaKnown RBP5.8□□□□□ -1.48
LRIF1-203ENST00000494675 NUDT12Q9BQG2 462 aa5.8□□□□□ -1.48
LRIF1-203ENST00000494675 MS4A1P11836 297 aa5.8□□□□□ -1.48
LRIF1-203ENST00000494675 TRIM46Q7Z4K8 759 aa5.8□□□□□ -1.48
LRIF1-203ENST00000494675 ALDH1A1P00352 501 aa5.79□□□□□ -1.48
LRIF1-203ENST00000494675 SPIRE2Q8WWL2 714 aa5.79□□□□□ -1.48
LRIF1-203ENST00000494675 ADAMTS8Q9UP79 889 aa5.79□□□□□ -1.48
LRIF1-203ENST00000494675 CAPN5O15484 640 aaPredicted RBP5.78□□□□□ -1.48
LRIF1-203ENST00000494675 DIXDC1Q155Q3 683 aa5.78□□□□□ -1.48
LRIF1-203ENST00000494675 EHBP1Q8NDI1 1231 aa5.78□□□□□ -1.48
LRIF1-203ENST00000494675 BEGAINQ9BUH8 593 aa5.78□□□□□ -1.48
LRIF1-203ENST00000494675 SKOR1P84550 965 aa5.78□□□□□ -1.48
LRIF1-203ENST00000494675 FAM117AQ9C073 453 aa5.78□□□□□ -1.48
LRIF1-203ENST00000494675 GTF3C3Q9Y5Q9 886 aa5.78□□□□□ -1.48
LRIF1-203ENST00000494675 WASF2Q9Y6W5 498 aa5.78□□□□□ -1.48
LRIF1-203ENST00000494675 SPDYE5A6NIY4 337 aa5.77□□□□□ -1.49
LRIF1-203ENST00000494675 CCNYL3P0C7X3 344 aa5.77□□□□□ -1.49
LRIF1-203ENST00000494675 BMP1P13497 986 aa5.77□□□□□ -1.49
LRIF1-203ENST00000494675 DDRGK1Q96HY6 314 aa5.77□□□□□ -1.49
LRIF1-203ENST00000494675 KRTAP4-5Q9BYR2 181 aa5.76□□□□□ -1.49
LRIF1-203ENST00000494675 MSTNO14793 375 aa5.76□□□□□ -1.49
LRIF1-203ENST00000494675 NDUFV2P19404 249 aa5.76□□□□□ -1.49
LRIF1-203ENST00000494675 PTPRNQ16849 979 aa5.76□□□□□ -1.49
LRIF1-203ENST00000494675 PTCRAQ6ISU1 281 aaPredicted RBP5.76□□□□□ -1.49
LRIF1-203ENST00000494675 TBC1D2Q9BYX2 928 aa5.76□□□□□ -1.49
LRIF1-203ENST00000494675 PCDHGC3Q9UN70 934 aa5.76□□□□□ -1.49
LRIF1-203ENST00000494675 MOXD2PA6NHM9 499 aa5.75□□□□□ -1.49
LRIF1-203ENST00000494675 VSIG8P0DPA2 414 aa5.75□□□□□ -1.49
LRIF1-203ENST00000494675 KCNH2Q12809 1159 aa5.75□□□□□ -1.49
LRIF1-203ENST00000494675 MTMR2Q13614 643 aa5.75□□□□□ -1.49
LRIF1-203ENST00000494675 KANK3Q6NY19 840 aa5.75□□□□□ -1.49
LRIF1-203ENST00000494675 PRR7Q8TB68 274 aa5.75□□□□□ -1.49
LRIF1-203ENST00000494675 IRS1P35568 1242 aa5.74□□□□□ -1.49
LRIF1-203ENST00000494675 EVA1BQ9NVM1 165 aa5.74□□□□□ -1.49
LRIF1-203ENST00000494675 PLEKHG3A1L390 1219 aa5.74□□□□□ -1.49
LRIF1-203ENST00000494675 K7ELQ4 463 aaPredicted RBP5.74□□□□□ -1.49
LRIF1-203ENST00000494675 GOLGA2P5Q9HBQ8 144 aa5.74□□□□□ -1.49
LRIF1-203ENST00000494675 SIAH2O43255 324 aa5.73□□□□□ -1.49
LRIF1-203ENST00000494675 GJA5P36382 358 aa5.73□□□□□ -1.49
LRIF1-203ENST00000494675 SH3BP2P78314 561 aa5.73□□□□□ -1.49
LRIF1-203ENST00000494675 DESI1Q6ICB0 168 aa5.73□□□□□ -1.49
LRIF1-203ENST00000494675 ZFP42Q96MM3 310 aa5.73□□□□□ -1.49
LRIF1-203ENST00000494675 UNC93B1Q9H1C4 597 aa5.73□□□□□ -1.49
LRIF1-203ENST00000494675 SPTLC1O15269 473 aa5.72□□□□□ -1.49
LRIF1-203ENST00000494675 CTHP32929 405 aa5.72□□□□□ -1.49
LRIF1-203ENST00000494675 LINC01559Q495D7 138 aa5.72□□□□□ -1.49
LRIF1-203ENST00000494675 RIC3Q7Z5B4 369 aa5.72□□□□□ -1.49
LRIF1-203ENST00000494675 BAP1Q92560 729 aa5.72□□□□□ -1.49
LRIF1-203ENST00000494675 VARSP26640 1264 aaKnown RBP5.72□□□□□ -1.49
LRIF1-203ENST00000494675 RSBN1LQ6PCB5 846 aaPredicted RBP5.72□□□□□ -1.49
LRIF1-203ENST00000494675 RSPH6AQ9H0K4 717 aa5.71□□□□□ -1.5
LRIF1-203ENST00000494675 FAM174AQ8TBP5 190 aa5.7□□□□□ -1.5
LRIF1-203ENST00000494675 ZBTB3Q9H5J0 574 aa5.7□□□□□ -1.5
LRIF1-203ENST00000494675 SCARF1Q14162 830 aa5.7□□□□□ -1.5
LRIF1-203ENST00000494675 LYPD8Q6UX82 237 aa5.7□□□□□ -1.5
LRIF1-203ENST00000494675 TUSC1Q2TAM9 212 aa5.69□□□□□ -1.5
LRIF1-203ENST00000494675 MYSM1Q5VVJ2 828 aa5.69□□□□□ -1.5
LRIF1-203ENST00000494675 MPNDQ8N594 471 aa5.69□□□□□ -1.5
LRIF1-203ENST00000494675 ZNF511Q8NB15 262 aa5.69□□□□□ -1.5
LRIF1-203ENST00000494675 SPOCK3Q9BQ16 436 aa5.69□□□□□ -1.5
LRIF1-203ENST00000494675 PCDHB15Q9Y5E8 787 aa5.69□□□□□ -1.5
LRIF1-203ENST00000494675 PRPF38BQ5VTL8 546 aaKnown RBP5.68□□□□□ -1.5
LRIF1-203ENST00000494675 ATP1B4Q9UN42 357 aaPredicted RBP5.68□□□□□ -1.5
LRIF1-203ENST00000494675 MRPL14Q6P1L8 145 aaKnown RBP5.68□□□□□ -1.5
LRIF1-203ENST00000494675 GOPCQ9HD26 462 aa5.68□□□□□ -1.5
LRIF1-203ENST00000494675 NUTM2BA6NNL0 878 aaPredicted RBP5.67□□□□□ -1.5
LRIF1-203ENST00000494675 NUTM2EB1AL46 878 aaPredicted RBP5.67□□□□□ -1.5
LRIF1-203ENST00000494675 HRCP23327 699 aa5.67□□□□□ -1.5
LRIF1-203ENST00000494675 CSPP1Q1MSJ5 1256 aa5.67□□□□□ -1.5
LRIF1-203ENST00000494675 NUTM2DQ5VT03 806 aaPredicted RBP5.67□□□□□ -1.5
LRIF1-203ENST00000494675 NUTM2AQ8IVF1 878 aaPredicted RBP5.67□□□□□ -1.5
LRIF1-203ENST00000494675 LIMD1Q9UGP4 676 aa5.67□□□□□ -1.5
LRIF1-203ENST00000494675 CLK2P49760 499 aaKnown RBP5.66□□□□□ -1.5
LRIF1-203ENST00000494675 NNTQ13423 1086 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms