RNA–Protein interactions for RNA: ENST00000494397.5

ARHGAP4-223, Transcript of Rho GTPase activating protein 4, human

TSL 5

Gene ARHGAP4, Length 1,752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-223	ENST00000494397	ANKLE2	Q86XL3	938 aa		29.62	■■■□□ 2.33
ARHGAP4-223	ENST00000494397	PLEKHG3	A1L390	1219 aa		29.62	■■■□□ 2.33
ARHGAP4-223	ENST00000494397	NCBP3	Q53F19	620 aa	Known RBP	29.62	■■■□□ 2.33
ARHGAP4-223	ENST00000494397	TOPAZ1	Q8N9V7	1692 aa		29.61	■■■□□ 2.33
ARHGAP4-223	ENST00000494397	TRMT2A	Q8IZ69	625 aa	Known RBP	29.61	■■■□□ 2.33
ARHGAP4-223	ENST00000494397	AKAP12	Q02952	1782 aa		29.6	■■■□□ 2.33
ARHGAP4-223	ENST00000494397	U2AF1L5	P0DN76	240 aa	Predicted RBP	29.59	■■■□□ 2.33
ARHGAP4-223	ENST00000494397	U2AF1	Q01081	240 aa	Known RBP eCLIP	29.59	■■■□□ 2.33
ARHGAP4-223	ENST00000494397	ITSN1	Q15811	1721 aa		29.58	■■■□□ 2.33
ARHGAP4-223	ENST00000494397		E9PSI1	815 aa		29.57	■■■□□ 2.32
ARHGAP4-223	ENST00000494397	NME9	Q86XW9	330 aa		29.57	■■■□□ 2.32
ARHGAP4-223	ENST00000494397	AATK	Q6ZMQ8	1374 aa		29.56	■■■□□ 2.32
ARHGAP4-223	ENST00000494397	TCP11L2	Q8N4U5	519 aa		29.56	■■■□□ 2.32
ARHGAP4-223	ENST00000494397	WWC1	Q8IX03	1113 aa		29.55	■■■□□ 2.32
ARHGAP4-223	ENST00000494397	PHF23	Q9BUL5	403 aa	Predicted RBP	29.55	■■■□□ 2.32
ARHGAP4-223	ENST00000494397	CCDC27	Q2M243	656 aa		29.54	■■■□□ 2.32
ARHGAP4-223	ENST00000494397	DIAPH1	O60610	1272 aa	Known RBP	29.54	■■■□□ 2.32
ARHGAP4-223	ENST00000494397	POLK	Q9UBT6	870 aa		29.54	■■■□□ 2.32
ARHGAP4-223	ENST00000494397	KCNA6	P17658	529 aa		29.53	■■■□□ 2.32
ARHGAP4-223	ENST00000494397	COG3	Q96JB2	828 aa		29.53	■■■□□ 2.32
ARHGAP4-223	ENST00000494397	ACE	P12821	1306 aa		29.53	■■■□□ 2.32
ARHGAP4-223	ENST00000494397	NKTR	P30414	1462 aa	Known RBP	29.52	■■■□□ 2.32
ARHGAP4-223	ENST00000494397	NRK	Q7Z2Y5	1582 aa		29.5	■■■□□ 2.31
ARHGAP4-223	ENST00000494397	U2SURP	O15042	1029 aa	Known RBP	29.5	■■■□□ 2.31
ARHGAP4-223	ENST00000494397	USP6	P35125	1406 aa		29.5	■■■□□ 2.31
ARHGAP4-223	ENST00000494397	SPINK5	Q9NQ38	1064 aa	Predicted RBP	29.49	■■■□□ 2.31
ARHGAP4-223	ENST00000494397	TTC21B	Q7Z4L5	1316 aa		29.49	■■■□□ 2.31
ARHGAP4-223	ENST00000494397	SETD1B	Q9UPS6	1966 aa	Known RBP	29.49	■■■□□ 2.31
ARHGAP4-223	ENST00000494397	ANKAR	Q7Z5J8	1434 aa		29.49	■■■□□ 2.31
ARHGAP4-223	ENST00000494397	B4GALNT3	Q6L9W6	998 aa		29.48	■■■□□ 2.31
ARHGAP4-223	ENST00000494397	WDR63	Q8IWG1	891 aa		29.48	■■■□□ 2.31
ARHGAP4-223	ENST00000494397	PNN	Q9H307	717 aa	Known RBP	29.48	■■■□□ 2.31
ARHGAP4-223	ENST00000494397	CDK12	Q9NYV4	1490 aa	Predicted RBP	29.47	■■■□□ 2.31
ARHGAP4-223	ENST00000494397	PLEKHF1	Q96S99	279 aa		29.47	■■■□□ 2.31
ARHGAP4-223	ENST00000494397	NUTM2F	A1L443	756 aa		29.46	■■■□□ 2.31
ARHGAP4-223	ENST00000494397	ZRANB1	Q9UGI0	708 aa		29.46	■■■□□ 2.31
ARHGAP4-223	ENST00000494397	RRP7A	Q9Y3A4	280 aa	Known RBP	29.46	■■■□□ 2.31
ARHGAP4-223	ENST00000494397	DMRT2	Q9Y5R5	561 aa		29.46	■■■□□ 2.31
ARHGAP4-223	ENST00000494397	SSH2	Q76I76	1423 aa		29.45	■■■□□ 2.3
ARHGAP4-223	ENST00000494397	NEUROD2	Q15784	382 aa		29.44	■■■□□ 2.3
ARHGAP4-223	ENST00000494397	NPHP4	O75161	1426 aa	Predicted RBP	29.43	■■■□□ 2.3
ARHGAP4-223	ENST00000494397	MAPK8IP3	Q9UPT6	1336 aa		29.42	■■■□□ 2.3
ARHGAP4-223	ENST00000494397	OVOS2	A0A0J9YW53	1432 aa		29.42	■■■□□ 2.3
ARHGAP4-223	ENST00000494397	OVOS2	Q6IE36	1432 aa		29.42	■■■□□ 2.3
ARHGAP4-223	ENST00000494397	PPM1G	O15355	546 aa	Predicted RBP	29.41	■■■□□ 2.3
ARHGAP4-223	ENST00000494397	TTC21A	Q8NDW8	1320 aa		29.41	■■■□□ 2.3
ARHGAP4-223	ENST00000494397	FCHSD2	O94868	740 aa		29.41	■■■□□ 2.3
ARHGAP4-223	ENST00000494397	FBLN1	P23142	703 aa		29.41	■■■□□ 2.3
ARHGAP4-223	ENST00000494397	EMILIN1	Q9Y6C2	1016 aa		29.41	■■■□□ 2.3
ARHGAP4-223	ENST00000494397	TSHZ2	Q9NRE2	1034 aa		29.4	■■■□□ 2.3
ARHGAP4-223	ENST00000494397	CHD2	O14647	1828 aa	Known RBP	29.4	■■■□□ 2.3
ARHGAP4-223	ENST00000494397	CCDC136	Q96JN2	1154 aa		29.39	■■■□□ 2.3
ARHGAP4-223	ENST00000494397	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	29.38	■■■□□ 2.29
ARHGAP4-223	ENST00000494397	EXOC6	Q8TAG9	804 aa		29.38	■■■□□ 2.29
ARHGAP4-223	ENST00000494397	FMN2	Q9NZ56	1722 aa		29.37	■■■□□ 2.29
ARHGAP4-223	ENST00000494397	PLIN1	O60240	522 aa		29.36	■■■□□ 2.29
ARHGAP4-223	ENST00000494397	TMPO	P42166	694 aa	Known RBP	29.36	■■■□□ 2.29
ARHGAP4-223	ENST00000494397	USP31	Q70CQ4	1352 aa		29.36	■■■□□ 2.29
ARHGAP4-223	ENST00000494397	IL13	P35225	146 aa		29.36	■■■□□ 2.29
ARHGAP4-223	ENST00000494397	NGDN	Q8NEJ9	315 aa	Known RBP	29.36	■■■□□ 2.29
ARHGAP4-223	ENST00000494397	PMFBP1	Q8TBY8	1022 aa		29.36	■■■□□ 2.29
ARHGAP4-223	ENST00000494397	MAP2	P11137	1827 aa	Known RBP	29.35	■■■□□ 2.29
ARHGAP4-223	ENST00000494397	RSPH6A	Q9H0K4	717 aa		29.34	■■■□□ 2.29
ARHGAP4-223	ENST00000494397	LRRC7	Q96NW7	1537 aa		29.33	■■■□□ 2.29
ARHGAP4-223	ENST00000494397	MYH16	Q9H6N6	1097 aa		29.33	■■■□□ 2.29
ARHGAP4-223	ENST00000494397	RRS1	Q15050	365 aa	Known RBP	29.32	■■■□□ 2.28
ARHGAP4-223	ENST00000494397	NALCN	Q8IZF0	1738 aa		29.31	■■■□□ 2.28
ARHGAP4-223	ENST00000494397	ADGRL3	Q9HAR2	1447 aa		29.3	■■■□□ 2.28
ARHGAP4-223	ENST00000494397	NEFM	P07197	916 aa		29.29	■■■□□ 2.28
ARHGAP4-223	ENST00000494397	TRIM35	Q9UPQ4	493 aa		29.29	■■■□□ 2.28
ARHGAP4-223	ENST00000494397	PRKAR2B	P31323	418 aa		29.29	■■■□□ 2.28
ARHGAP4-223	ENST00000494397	IL16	Q14005	1332 aa		29.28	■■■□□ 2.28
ARHGAP4-223	ENST00000494397	CRBN	Q96SW2	442 aa		29.27	■■■□□ 2.28
ARHGAP4-223	ENST00000494397	RIPK4	P57078	832 aa		29.26	■■■□□ 2.28
ARHGAP4-223	ENST00000494397	NWD1	Q149M9	1564 aa		29.26	■■■□□ 2.27
ARHGAP4-223	ENST00000494397	RGPD8	O14715	1765 aa	Predicted RBP	29.25	■■■□□ 2.27
ARHGAP4-223	ENST00000494397	C20orf194	Q5TEA3	1177 aa		29.24	■■■□□ 2.27
ARHGAP4-223	ENST00000494397	BCAR3	O75815	825 aa		29.21	■■■□□ 2.27
ARHGAP4-223	ENST00000494397	HMOX1	P09601	288 aa		29.21	■■■□□ 2.27
ARHGAP4-223	ENST00000494397	CT47B1	P0C2W7	299 aa	Predicted RBP	29.21	■■■□□ 2.27
ARHGAP4-223	ENST00000494397	PHF8	Q9UPP1	1060 aa		29.21	■■■□□ 2.27
ARHGAP4-223	ENST00000494397	NFE2L2	Q16236	605 aa		29.2	■■■□□ 2.26
ARHGAP4-223	ENST00000494397	PIK3C2A	O00443	1686 aa		29.19	■■■□□ 2.26
ARHGAP4-223	ENST00000494397	EIF4A2	Q14240	407 aa	Known RBP	29.18	■■■□□ 2.26
ARHGAP4-223	ENST00000494397	FANCI	Q9NVI1	1328 aa		29.18	■■■□□ 2.26
ARHGAP4-223	ENST00000494397	RARS	P54136	660 aa	Known RBP	29.18	■■■□□ 2.26
ARHGAP4-223	ENST00000494397	PHACTR3	Q96KR7	559 aa		29.17	■■■□□ 2.26
ARHGAP4-223	ENST00000494397	SBNO1	A3KN83	1393 aa		29.16	■■■□□ 2.26
ARHGAP4-223	ENST00000494397	USP54	Q70EL1	1684 aa		29.16	■■■□□ 2.26
ARHGAP4-223	ENST00000494397	PEAK1	Q9H792	1746 aa		29.15	■■■□□ 2.26
ARHGAP4-223	ENST00000494397	PDE3A	Q14432	1141 aa		29.15	■■■□□ 2.26
ARHGAP4-223	ENST00000494397	RBM33	Q96EV2	1170 aa	Known RBP	29.15	■■■□□ 2.26
ARHGAP4-223	ENST00000494397	MAP3K19	Q56UN5	1328 aa		29.15	■■■□□ 2.26
ARHGAP4-223	ENST00000494397	FLT4	P35916	1363 aa		29.14	■■■□□ 2.26
ARHGAP4-223	ENST00000494397	NLRP6	P59044	892 aa		29.13	■■■□□ 2.25
ARHGAP4-223	ENST00000494397	CALD1	Q05682	793 aa	Known RBP	29.13	■■■□□ 2.25
ARHGAP4-223	ENST00000494397	KIF24	Q5T7B8	1368 aa		29.12	■■■□□ 2.25
ARHGAP4-223	ENST00000494397	HSP90AB2P	Q58FF8	381 aa		29.12	■■■□□ 2.25
ARHGAP4-223	ENST00000494397	C14orf37	Q86TY3	774 aa		29.12	■■■□□ 2.25
ARHGAP4-223	ENST00000494397	LMOD3	Q0VAK6	560 aa		29.11	■■■□□ 2.25

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