RNA–Protein interactions for RNA: ENST00000494340.1

LINC02008-202, Transcript of long intergenic non-protein coding RNA 2008, humanhuman

TSL 2

Gene LINC02008, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02008-202ENST00000494340 CCDC61Q9Y6R9 512 aa14.01□□□□□ -0.17
LINC02008-202ENST00000494340 BRWD3Q6RI45 1802 aa14.01□□□□□ -0.17
LINC02008-202ENST00000494340 PLEKHG3A1L390 1219 aa14□□□□□ -0.17
LINC02008-202ENST00000494340 BLMP54132 1417 aaPredicted RBP13.99□□□□□ -0.17
LINC02008-202ENST00000494340 BRD4O60885 1362 aaPredicted RBP13.99□□□□□ -0.17
LINC02008-202ENST00000494340 PHRF1Q9P1Y6 1649 aaKnown RBP13.99□□□□□ -0.17
LINC02008-202ENST00000494340 CENPJQ9HC77 1338 aaPredicted RBP13.98□□□□□ -0.17
LINC02008-202ENST00000494340 NBPF1Q3BBV0 1214 aa13.98□□□□□ -0.17
LINC02008-202ENST00000494340 PAK3O75914 559 aaPredicted RBP13.97□□□□□ -0.17
LINC02008-202ENST00000494340 SEPT12Q8IYM1 358 aa13.97□□□□□ -0.17
LINC02008-202ENST00000494340 BTG4Q9NY30 223 aa13.97□□□□□ -0.17
LINC02008-202ENST00000494340 QRICH2Q9H0J4 1663 aa13.97□□□□□ -0.17
LINC02008-202ENST00000494340 TRPM1Q7Z4N2 1603 aa13.97□□□□□ -0.17
LINC02008-202ENST00000494340 ACEP12821 1306 aa13.96□□□□□ -0.17
LINC02008-202ENST00000494340 NBPF8Q3BBV2 869 aa13.96□□□□□ -0.17
LINC02008-202ENST00000494340 CCDC9Q9Y3X0 531 aaKnown RBP13.96□□□□□ -0.17
LINC02008-202ENST00000494340 KRT27Q7Z3Y8 459 aa13.95□□□□□ -0.18
LINC02008-202ENST00000494340 L3MBTL2Q969R5 705 aa13.95□□□□□ -0.18
LINC02008-202ENST00000494340 SPATA31A5Q5VU36 1347 aa13.94□□□□□ -0.18
LINC02008-202ENST00000494340 SPATA31A7Q8IWB4 1347 aa13.94□□□□□ -0.18
LINC02008-202ENST00000494340 PPIP5K1Q6PFW1 1433 aa13.94□□□□□ -0.18
LINC02008-202ENST00000494340 PRDM11Q9NQV5 511 aa13.94□□□□□ -0.18
LINC02008-202ENST00000494340 THSD7AQ9UPZ6 1657 aa13.94□□□□□ -0.18
LINC02008-202ENST00000494340 NRKQ7Z2Y5 1582 aa13.93□□□□□ -0.18
LINC02008-202ENST00000494340 PLEKHG5O94827 1062 aa13.93□□□□□ -0.18
LINC02008-202ENST00000494340 ZRANB1Q9UGI0 708 aa13.93□□□□□ -0.18
LINC02008-202ENST00000494340 CPDO75976 1380 aa13.93□□□□□ -0.18
LINC02008-202ENST00000494340 KIAA0232Q92628 1395 aa13.93□□□□□ -0.18
LINC02008-202ENST00000494340 USP19O94966 1318 aa13.92□□□□□ -0.18
LINC02008-202ENST00000494340 SRPK2P78362 688 aaKnown RBP13.92□□□□□ -0.18
LINC02008-202ENST00000494340 SF3B2Q13435 895 aaKnown RBP13.91□□□□□ -0.18
LINC02008-202ENST00000494340 FAM98CQ17RN3 349 aaKnown RBP13.9□□□□□ -0.18
LINC02008-202ENST00000494340 NLRP13Q86W25 1043 aa13.9□□□□□ -0.18
LINC02008-202ENST00000494340 ABTB2Q8N961 1025 aa13.9□□□□□ -0.18
LINC02008-202ENST00000494340 LMO7Q8WWI1 1683 aa13.9□□□□□ -0.18
LINC02008-202ENST00000494340 USP6P35125 1406 aa13.9□□□□□ -0.19
LINC02008-202ENST00000494340 SPATA31A1Q5TZJ5 1347 aa13.9□□□□□ -0.19
LINC02008-202ENST00000494340 EVC2Q86UK5 1308 aa13.9□□□□□ -0.19
LINC02008-202ENST00000494340 ROCK2O75116 1388 aaKnown RBP13.89□□□□□ -0.19
LINC02008-202ENST00000494340 CABP2Q9NPB3 220 aa13.89□□□□□ -0.19
LINC02008-202ENST00000494340 RGPD1P0DJD0 1748 aa13.89□□□□□ -0.19
LINC02008-202ENST00000494340 SBNO2Q9Y2G9 1366 aa13.88□□□□□ -0.19
LINC02008-202ENST00000494340 SIN3AQ96ST3 1273 aa13.88□□□□□ -0.19
LINC02008-202ENST00000494340 SSH2Q76I76 1423 aa13.88□□□□□ -0.19
LINC02008-202ENST00000494340 SLIT3O75094 1523 aa13.87□□□□□ -0.19
LINC02008-202ENST00000494340 A0A0G2JS52 829 aa13.87□□□□□ -0.19
LINC02008-202ENST00000494340 MYT1Q01538 1121 aa13.87□□□□□ -0.19
LINC02008-202ENST00000494340 ZC3H6P61129 1189 aaKnown RBP13.86□□□□□ -0.19
LINC02008-202ENST00000494340 BARGINQ6ZT62 677 aa13.86□□□□□ -0.19
LINC02008-202ENST00000494340 ZNF692Q9BU19 519 aaPredicted RBP13.86□□□□□ -0.19
LINC02008-202ENST00000494340 CABP1Q9NZU7 370 aa13.86□□□□□ -0.19
LINC02008-202ENST00000494340 DISP2A7MBM2 1401 aa13.86□□□□□ -0.19
LINC02008-202ENST00000494340 AKAP12Q02952 1782 aa13.86□□□□□ -0.19
LINC02008-202ENST00000494340 CAMTA1Q9Y6Y1 1673 aa13.85□□□□□ -0.19
LINC02008-202ENST00000494340 GCP02774 474 aa13.85□□□□□ -0.19
LINC02008-202ENST00000494340 BAG6P46379 1132 aa13.85□□□□□ -0.19
LINC02008-202ENST00000494340 CHRNA2Q15822 529 aa13.85□□□□□ -0.19
LINC02008-202ENST00000494340 NUTM2GQ5VZR2 741 aa13.85□□□□□ -0.19
LINC02008-202ENST00000494340 THRAP3Q9Y2W1 955 aaKnown RBP13.85□□□□□ -0.19
LINC02008-202ENST00000494340 NEUROD1Q13562 356 aa13.84□□□□□ -0.19
LINC02008-202ENST00000494340 DEFB132Q7Z7B7 95 aa13.84□□□□□ -0.19
LINC02008-202ENST00000494340 PIK3C2AO00443 1686 aa13.84□□□□□ -0.19
LINC02008-202ENST00000494340 COL5A2P05997 1499 aaPredicted RBP13.83□□□□□ -0.2
LINC02008-202ENST00000494340 EVA1CP58658 441 aa13.83□□□□□ -0.2
LINC02008-202ENST00000494340 STRN4Q9NRL3 753 aa13.83□□□□□ -0.2
LINC02008-202ENST00000494340 TNS1Q9HBL0 1735 aaKnown RBP13.83□□□□□ -0.2
LINC02008-202ENST00000494340 AATKQ6ZMQ8 1374 aa13.83□□□□□ -0.2
LINC02008-202ENST00000494340 SRCAPQ6ZRS2 3230 aa13.83□□□□□ -0.2
LINC02008-202ENST00000494340 TTC21AQ8NDW8 1320 aa13.82□□□□□ -0.2
LINC02008-202ENST00000494340 CPSF1Q10570 1443 aaKnown RBP13.81□□□□□ -0.2
LINC02008-202ENST00000494340 PARP4Q9UKK3 1724 aaKnown RBP13.81□□□□□ -0.2
LINC02008-202ENST00000494340 C11orf95C9JLR9 678 aaPredicted RBP13.81□□□□□ -0.2
LINC02008-202ENST00000494340 NLRP6P59044 892 aa13.81□□□□□ -0.2
LINC02008-202ENST00000494340 FAM196AQ6ZSG2 479 aa13.81□□□□□ -0.2
LINC02008-202ENST00000494340 TCP11L2Q8N4U5 519 aa13.81□□□□□ -0.2
LINC02008-202ENST00000494340 CRB1P82279 1406 aa13.81□□□□□ -0.2
LINC02008-202ENST00000494340 ABCC6O95255 1503 aa13.8□□□□□ -0.2
LINC02008-202ENST00000494340 LARP1Q6PKG0 1096 aaKnown RBP13.8□□□□□ -0.2
LINC02008-202ENST00000494340 KCNH5Q8NCM2 988 aa13.8□□□□□ -0.2
LINC02008-202ENST00000494340 MON2Q7Z3U7 1717 aa13.8□□□□□ -0.2
LINC02008-202ENST00000494340 COL18A1P39060 1754 aa13.8□□□□□ -0.2
LINC02008-202ENST00000494340 PARD3Q8TEW0 1356 aa13.8□□□□□ -0.2
LINC02008-202ENST00000494340 LRP5O75197 1615 aa13.79□□□□□ -0.2
LINC02008-202ENST00000494340 USP54Q70EL1 1684 aa13.79□□□□□ -0.2
LINC02008-202ENST00000494340 PUS7Q96PZ0 661 aaKnown RBP13.79□□□□□ -0.2
LINC02008-202ENST00000494340 TTC21BQ7Z4L5 1316 aa13.79□□□□□ -0.2
LINC02008-202ENST00000494340 TONSLQ96HA7 1378 aa13.79□□□□□ -0.2
LINC02008-202ENST00000494340 CARD11Q9BXL7 1154 aa13.78□□□□□ -0.2
LINC02008-202ENST00000494340 PDE3BQ13370 1112 aa13.77□□□□□ -0.21
LINC02008-202ENST00000494340 WNK3Q9BYP7 1800 aa13.76□□□□□ -0.21
LINC02008-202ENST00000494340 USP31Q70CQ4 1352 aa13.76□□□□□ -0.21
LINC02008-202ENST00000494340 KTN1Q86UP2 1357 aaKnown RBP13.76□□□□□ -0.21
LINC02008-202ENST00000494340 SLC24A1O60721 1099 aa13.76□□□□□ -0.21
LINC02008-202ENST00000494340 USP35Q9P2H5 1018 aa13.76□□□□□ -0.21
LINC02008-202ENST00000494340 NFAT5O94916 1531 aa13.75□□□□□ -0.21
LINC02008-202ENST00000494340 WDR17Q8IZU2 1322 aa13.75□□□□□ -0.21
LINC02008-202ENST00000494340 EN1Q05925 392 aaPredicted RBP13.75□□□□□ -0.21
LINC02008-202ENST00000494340 FAM182BQ5T319 152 aa13.75□□□□□ -0.21
LINC02008-202ENST00000494340 ARHGEF25Q86VW2 580 aa13.75□□□□□ -0.21
LINC02008-202ENST00000494340 CDCA7Q9BWT1 371 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms