RNA–Protein interactions for RNA: ENST00000494299.1

SAPCD1-211, Transcript of suppressor APC domain containing 1, humanhuman

TSL 3

Gene SAPCD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-211ENST00000494299 PLCH1Q4KWH8 1693 aa19.01■□□□□ 0.63
SAPCD1-211ENST00000494299 CLSPNQ9HAW4 1339 aa19■□□□□ 0.63
SAPCD1-211ENST00000494299 TRPC5Q9UL62 973 aaPredicted RBP19■□□□□ 0.63
SAPCD1-211ENST00000494299 PPIP5K1Q6PFW1 1433 aa19■□□□□ 0.63
SAPCD1-211ENST00000494299 SSH2Q76I76 1423 aa19■□□□□ 0.63
SAPCD1-211ENST00000494299 CABLES1Q8TDN4 633 aa18.99■□□□□ 0.63
SAPCD1-211ENST00000494299 NRAPQ86VF7 1730 aa18.98■□□□□ 0.63
SAPCD1-211ENST00000494299 PHRF1Q9P1Y6 1649 aaKnown RBP18.98■□□□□ 0.63
SAPCD1-211ENST00000494299 GLI3P10071 1580 aa18.98■□□□□ 0.63
SAPCD1-211ENST00000494299 UNC5CLQ8IV45 518 aa18.97■□□□□ 0.63
SAPCD1-211ENST00000494299 CABP2Q9NPB3 220 aa18.97■□□□□ 0.63
SAPCD1-211ENST00000494299 EVC2Q86UK5 1308 aa18.97■□□□□ 0.63
SAPCD1-211ENST00000494299 COL14A1Q05707 1796 aaKnown RBP18.96■□□□□ 0.63
SAPCD1-211ENST00000494299 AKAP12Q02952 1782 aa18.96■□□□□ 0.63
SAPCD1-211ENST00000494299 FAM83GA6ND36 823 aa18.95■□□□□ 0.62
SAPCD1-211ENST00000494299 SRPK2P78362 688 aaKnown RBP18.95■□□□□ 0.62
SAPCD1-211ENST00000494299 USP6P35125 1406 aa18.94■□□□□ 0.62
SAPCD1-211ENST00000494299 CPSF1Q10570 1443 aaKnown RBP18.94■□□□□ 0.62
SAPCD1-211ENST00000494299 CARD11Q9BXL7 1154 aa18.94■□□□□ 0.62
SAPCD1-211ENST00000494299 TIMELESSQ9UNS1 1208 aa18.94■□□□□ 0.62
SAPCD1-211ENST00000494299 USP19O94966 1318 aa18.94■□□□□ 0.62
SAPCD1-211ENST00000494299 GJD4Q96KN9 370 aaPredicted RBP18.93■□□□□ 0.62
SAPCD1-211ENST00000494299 VPS72Q15906 364 aa18.92■□□□□ 0.62
SAPCD1-211ENST00000494299 PUS7Q96PZ0 661 aaKnown RBP18.92■□□□□ 0.62
SAPCD1-211ENST00000494299 CABP1Q9NZU7 370 aa18.92■□□□□ 0.62
SAPCD1-211ENST00000494299 NRKQ7Z2Y5 1582 aa18.92■□□□□ 0.62
SAPCD1-211ENST00000494299 ONECUT3O60422 494 aaPredicted RBP18.91■□□□□ 0.62
SAPCD1-211ENST00000494299 LMOD2Q6P5Q4 547 aa18.91■□□□□ 0.62
SAPCD1-211ENST00000494299 TESK2Q96S53 571 aa18.91■□□□□ 0.62
SAPCD1-211ENST00000494299 ATAD2Q6PL18 1390 aa18.91■□□□□ 0.62
SAPCD1-211ENST00000494299 PIK3C2AO00443 1686 aa18.9■□□□□ 0.62
SAPCD1-211ENST00000494299 UPF1Q92900 1129 aaKnown RBP eCLIP18.9■□□□□ 0.62
SAPCD1-211ENST00000494299 LMO7Q8WWI1 1683 aa18.89■□□□□ 0.61
SAPCD1-211ENST00000494299 MON2Q7Z3U7 1717 aa18.89■□□□□ 0.61
SAPCD1-211ENST00000494299 CPDO75976 1380 aa18.89■□□□□ 0.61
SAPCD1-211ENST00000494299 CD163L1Q9NR16 1453 aa18.89■□□□□ 0.61
SAPCD1-211ENST00000494299 SLIT3O75094 1523 aa18.89■□□□□ 0.61
SAPCD1-211ENST00000494299 PAK3O75914 559 aaPredicted RBP18.88■□□□□ 0.61
SAPCD1-211ENST00000494299 USP54Q70EL1 1684 aa18.87■□□□□ 0.61
SAPCD1-211ENST00000494299 ZNF692Q9BU19 519 aaPredicted RBP18.87■□□□□ 0.61
SAPCD1-211ENST00000494299 BRWD3Q6RI45 1802 aa18.86■□□□□ 0.61
SAPCD1-211ENST00000494299 KIAA0232Q92628 1395 aa18.86■□□□□ 0.61
SAPCD1-211ENST00000494299 HAP1P54257 671 aaPredicted RBP18.85■□□□□ 0.61
SAPCD1-211ENST00000494299 ABTB2Q8N961 1025 aa18.85■□□□□ 0.61
SAPCD1-211ENST00000494299 PCGF6Q9BYE7 350 aa18.85■□□□□ 0.61
SAPCD1-211ENST00000494299 NLRP13Q86W25 1043 aa18.83■□□□□ 0.6
SAPCD1-211ENST00000494299 BTG4Q9NY30 223 aa18.83■□□□□ 0.6
SAPCD1-211ENST00000494299 COL18A1P39060 1754 aa18.83■□□□□ 0.6
SAPCD1-211ENST00000494299 CAMTA1Q9Y6Y1 1673 aa18.82■□□□□ 0.6
SAPCD1-211ENST00000494299 ST20-MTHFSA0A0A6YYL1 179 aa18.82■□□□□ 0.6
SAPCD1-211ENST00000494299 SLC24A1O60721 1099 aa18.82■□□□□ 0.6
SAPCD1-211ENST00000494299 THSD7AQ9UPZ6 1657 aa18.82■□□□□ 0.6
SAPCD1-211ENST00000494299 SPATA31A5Q5VU36 1347 aa18.81■□□□□ 0.6
SAPCD1-211ENST00000494299 TTC21BQ7Z4L5 1316 aa18.81■□□□□ 0.6
SAPCD1-211ENST00000494299 SPATA31A7Q8IWB4 1347 aa18.81■□□□□ 0.6
SAPCD1-211ENST00000494299 TTC21AQ8NDW8 1320 aa18.81■□□□□ 0.6
SAPCD1-211ENST00000494299 GCP02774 474 aa18.81■□□□□ 0.6
SAPCD1-211ENST00000494299 PRDM11Q9NQV5 511 aa18.81■□□□□ 0.6
SAPCD1-211ENST00000494299 NUTM2GQ5VZR2 741 aa18.8■□□□□ 0.6
SAPCD1-211ENST00000494299 USP31Q70CQ4 1352 aa18.79■□□□□ 0.6
SAPCD1-211ENST00000494299 USP47Q96K76 1375 aa18.79■□□□□ 0.6
SAPCD1-211ENST00000494299 NINLQ9Y2I6 1382 aa18.79■□□□□ 0.6
SAPCD1-211ENST00000494299 PLEKHG5O94827 1062 aa18.78■□□□□ 0.6
SAPCD1-211ENST00000494299 NFAT5O94916 1531 aa18.78■□□□□ 0.6
SAPCD1-211ENST00000494299 KTN1Q86UP2 1357 aaKnown RBP18.78■□□□□ 0.6
SAPCD1-211ENST00000494299 ZC3H6P61129 1189 aaKnown RBP18.77■□□□□ 0.6
SAPCD1-211ENST00000494299 AATKQ6ZMQ8 1374 aa18.77■□□□□ 0.6
SAPCD1-211ENST00000494299 NLRP6P59044 892 aa18.76■□□□□ 0.59
SAPCD1-211ENST00000494299 CHRNA2Q15822 529 aa18.76■□□□□ 0.59
SAPCD1-211ENST00000494299 SEPT12Q8IYM1 358 aa18.76■□□□□ 0.59
SAPCD1-211ENST00000494299 SLC12A5Q9H2X9 1139 aa18.76■□□□□ 0.59
SAPCD1-211ENST00000494299 SPATA31A1Q5TZJ5 1347 aa18.75■□□□□ 0.59
SAPCD1-211ENST00000494299 EDC4Q6P2E9 1401 aaKnown RBP18.75■□□□□ 0.59
SAPCD1-211ENST00000494299 COL5A2P05997 1499 aaPredicted RBP18.75■□□□□ 0.59
SAPCD1-211ENST00000494299 ABCC6O95255 1503 aa18.74■□□□□ 0.59
SAPCD1-211ENST00000494299 A0A1W2PP64 1363 aa18.74■□□□□ 0.59
SAPCD1-211ENST00000494299 ARHGEF25Q86VW2 580 aa18.73■□□□□ 0.59
SAPCD1-211ENST00000494299 BARGINQ6ZT62 677 aa18.71■□□□□ 0.59
SAPCD1-211ENST00000494299 CCDC125Q86Z20 511 aa18.71■□□□□ 0.59
SAPCD1-211ENST00000494299 OVOS2A0A0J9YW53 1432 aa18.71■□□□□ 0.59
SAPCD1-211ENST00000494299 OVOS2Q6IE36 1432 aa18.71■□□□□ 0.59
SAPCD1-211ENST00000494299 FAM98CQ17RN3 349 aaKnown RBP18.7■□□□□ 0.58
SAPCD1-211ENST00000494299 KCNH5Q8NCM2 988 aa18.7■□□□□ 0.58
SAPCD1-211ENST00000494299 RGPD5Q99666 1765 aa18.7■□□□□ 0.58
SAPCD1-211ENST00000494299 SRCAPQ6ZRS2 3230 aa18.69■□□□□ 0.58
SAPCD1-211ENST00000494299 TERF2IPQ9NYB0 399 aa18.69■□□□□ 0.58
SAPCD1-211ENST00000494299 MYOM1P52179 1685 aa18.69■□□□□ 0.58
SAPCD1-211ENST00000494299 ANKRD36BQ8N2N9 1353 aa18.68■□□□□ 0.58
SAPCD1-211ENST00000494299 KRT27Q7Z3Y8 459 aa18.68■□□□□ 0.58
SAPCD1-211ENST00000494299 HDGFL2Q7Z4V5 671 aaPredicted RBP18.68■□□□□ 0.58
SAPCD1-211ENST00000494299 AXIN2Q9Y2T1 843 aa18.68■□□□□ 0.58
SAPCD1-211ENST00000494299 CCDC9Q9Y3X0 531 aaKnown RBP18.68■□□□□ 0.58
SAPCD1-211ENST00000494299 PARP4Q9UKK3 1724 aaKnown RBP18.68■□□□□ 0.58
SAPCD1-211ENST00000494299 BLMP54132 1417 aaPredicted RBP18.67■□□□□ 0.58
SAPCD1-211ENST00000494299 TMF1P82094 1093 aa18.67■□□□□ 0.58
SAPCD1-211ENST00000494299 LARP1Q6PKG0 1096 aaKnown RBP18.67■□□□□ 0.58
SAPCD1-211ENST00000494299 THRAP3Q9Y2W1 955 aaKnown RBP18.67■□□□□ 0.58
SAPCD1-211ENST00000494299 CRB1P82279 1406 aa18.66■□□□□ 0.58
SAPCD1-211ENST00000494299 NME9Q86XW9 330 aa18.66■□□□□ 0.58
SAPCD1-211ENST00000494299 TMC1Q8TDI8 760 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms