RNA–Protein interactions for RNA: ENST00000494278.1

FAM50A-207, Transcript of family with sequence similarity 50 member A, humanhuman

TSL 2

Gene FAM50A, Length 294 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM50A-207ENST00000494278 SLIT2O94813 1529 aa16.4■□□□□ 0.22
FAM50A-207ENST00000494278 BRD4O60885 1362 aaPredicted RBP16.4■□□□□ 0.22
FAM50A-207ENST00000494278 ATAD2Q6PL18 1390 aa16.4■□□□□ 0.22
FAM50A-207ENST00000494278 FNBP4Q8N3X1 1017 aaPredicted RBP16.4■□□□□ 0.22
FAM50A-207ENST00000494278 MON2Q7Z3U7 1717 aa16.39■□□□□ 0.21
FAM50A-207ENST00000494278 USP6P35125 1406 aa16.38■□□□□ 0.21
FAM50A-207ENST00000494278 BCL9LQ86UU0 1499 aa16.38■□□□□ 0.21
FAM50A-207ENST00000494278 NGLY1Q96IV0 654 aa16.38■□□□□ 0.21
FAM50A-207ENST00000494278 NRAPQ86VF7 1730 aa16.38■□□□□ 0.21
FAM50A-207ENST00000494278 COL14A1Q05707 1796 aaKnown RBP16.38■□□□□ 0.21
FAM50A-207ENST00000494278 ATRNO75882 1429 aa16.37■□□□□ 0.21
FAM50A-207ENST00000494278 SSH2Q76I76 1423 aa16.36■□□□□ 0.21
FAM50A-207ENST00000494278 LMOD2Q6P5Q4 547 aa16.36■□□□□ 0.21
FAM50A-207ENST00000494278 PIK3C2AO00443 1686 aa16.36■□□□□ 0.21
FAM50A-207ENST00000494278 CCER1Q8TC90 406 aaPredicted RBP16.35■□□□□ 0.21
FAM50A-207ENST00000494278 CABLES1Q8TDN4 633 aa16.35■□□□□ 0.21
FAM50A-207ENST00000494278 USP21Q9UK80 565 aa16.35■□□□□ 0.21
FAM50A-207ENST00000494278 USP47Q96K76 1375 aa16.35■□□□□ 0.21
FAM50A-207ENST00000494278 CPSF1Q10570 1443 aaKnown RBP16.35■□□□□ 0.21
FAM50A-207ENST00000494278 TESK2Q96S53 571 aa16.34■□□□□ 0.21
FAM50A-207ENST00000494278 CABP1Q9NZU7 370 aa16.34■□□□□ 0.21
FAM50A-207ENST00000494278 USP54Q70EL1 1684 aa16.34■□□□□ 0.21
FAM50A-207ENST00000494278 PAK3O75914 559 aaPredicted RBP16.33■□□□□ 0.2
FAM50A-207ENST00000494278 RXRBP28702 533 aa16.33■□□□□ 0.2
FAM50A-207ENST00000494278 HAP1P54257 671 aaPredicted RBP16.33■□□□□ 0.2
FAM50A-207ENST00000494278 PUS7Q96PZ0 661 aaKnown RBP16.33■□□□□ 0.2
FAM50A-207ENST00000494278 TRPC5Q9UL62 973 aaPredicted RBP16.33■□□□□ 0.2
FAM50A-207ENST00000494278 RGS12O14924 1447 aa16.33■□□□□ 0.2
FAM50A-207ENST00000494278 CD163L1Q9NR16 1453 aa16.33■□□□□ 0.2
FAM50A-207ENST00000494278 SLIT3O75094 1523 aa16.33■□□□□ 0.2
FAM50A-207ENST00000494278 ST20-MTHFSA0A0A6YYL1 179 aa16.32■□□□□ 0.2
FAM50A-207ENST00000494278 USP19O94966 1318 aa16.32■□□□□ 0.2
FAM50A-207ENST00000494278 GLI3P10071 1580 aa16.32■□□□□ 0.2
FAM50A-207ENST00000494278 QTRT2Q9H974 415 aaKnown RBP16.32■□□□□ 0.2
FAM50A-207ENST00000494278 SLC24A1O60721 1099 aa16.31■□□□□ 0.2
FAM50A-207ENST00000494278 RBM6P78332 1123 aaKnown RBP16.31■□□□□ 0.2
FAM50A-207ENST00000494278 LMO7Q8WWI1 1683 aa16.3■□□□□ 0.2
FAM50A-207ENST00000494278 NINLQ9Y2I6 1382 aa16.29■□□□□ 0.2
FAM50A-207ENST00000494278 UNC5CLQ8IV45 518 aa16.29■□□□□ 0.2
FAM50A-207ENST00000494278 ABTB2Q8N961 1025 aa16.28■□□□□ 0.2
FAM50A-207ENST00000494278 ZNF692Q9BU19 519 aaPredicted RBP16.28■□□□□ 0.2
FAM50A-207ENST00000494278 CPDO75976 1380 aa16.27■□□□□ 0.2
FAM50A-207ENST00000494278 PLEKHG5O94827 1062 aa16.27■□□□□ 0.2
FAM50A-207ENST00000494278 KTN1Q86UP2 1357 aaKnown RBP16.26■□□□□ 0.19
FAM50A-207ENST00000494278 KIAA0232Q92628 1395 aa16.26■□□□□ 0.19
FAM50A-207ENST00000494278 TTC21AQ8NDW8 1320 aa16.26■□□□□ 0.19
FAM50A-207ENST00000494278 FAM83GA6ND36 823 aa16.26■□□□□ 0.19
FAM50A-207ENST00000494278 NLRP13Q86W25 1043 aa16.26■□□□□ 0.19
FAM50A-207ENST00000494278 MYOM1P52179 1685 aa16.26■□□□□ 0.19
FAM50A-207ENST00000494278 TTC21BQ7Z4L5 1316 aa16.25■□□□□ 0.19
FAM50A-207ENST00000494278 GJD4Q96KN9 370 aaPredicted RBP16.25■□□□□ 0.19
FAM50A-207ENST00000494278 A0A1W2PP64 1363 aa16.25■□□□□ 0.19
FAM50A-207ENST00000494278 VPS72Q15906 364 aa16.24■□□□□ 0.19
FAM50A-207ENST00000494278 NUTM2GQ5VZR2 741 aa16.24■□□□□ 0.19
FAM50A-207ENST00000494278 EDC4Q6P2E9 1401 aaKnown RBP16.24■□□□□ 0.19
FAM50A-207ENST00000494278 TMF1P82094 1093 aa16.23■□□□□ 0.19
FAM50A-207ENST00000494278 PRDM11Q9NQV5 511 aa16.23■□□□□ 0.19
FAM50A-207ENST00000494278 NFAT5O94916 1531 aa16.23■□□□□ 0.19
FAM50A-207ENST00000494278 COL18A1P39060 1754 aa16.23■□□□□ 0.19
FAM50A-207ENST00000494278 BTG4Q9NY30 223 aa16.22■□□□□ 0.19
FAM50A-207ENST00000494278 USP31Q70CQ4 1352 aa16.22■□□□□ 0.19
FAM50A-207ENST00000494278 ABCC6O95255 1503 aa16.21■□□□□ 0.19
FAM50A-207ENST00000494278 NLRP6P59044 892 aa16.21■□□□□ 0.19
FAM50A-207ENST00000494278 HDGFL2Q7Z4V5 671 aaPredicted RBP16.21■□□□□ 0.19
FAM50A-207ENST00000494278 SLC12A5Q9H2X9 1139 aa16.21■□□□□ 0.19
FAM50A-207ENST00000494278 BRWD3Q6RI45 1802 aa16.21■□□□□ 0.19
FAM50A-207ENST00000494278 THSD7AQ9UPZ6 1657 aa16.21■□□□□ 0.18
FAM50A-207ENST00000494278 CAMTA1Q9Y6Y1 1673 aa16.21■□□□□ 0.18
FAM50A-207ENST00000494278 GCP02774 474 aa16.2■□□□□ 0.18
FAM50A-207ENST00000494278 TMC1Q8TDI8 760 aa16.2■□□□□ 0.18
FAM50A-207ENST00000494278 TERF2IPQ9NYB0 399 aa16.2■□□□□ 0.18
FAM50A-207ENST00000494278 ANKRD36BQ8N2N9 1353 aa16.2■□□□□ 0.18
FAM50A-207ENST00000494278 OVOS2A0A0J9YW53 1432 aa16.19■□□□□ 0.18
FAM50A-207ENST00000494278 OVOS2Q6IE36 1432 aa16.19■□□□□ 0.18
FAM50A-207ENST00000494278 ZC3H6P61129 1189 aaKnown RBP16.19■□□□□ 0.18
FAM50A-207ENST00000494278 COL5A2P05997 1499 aaPredicted RBP16.18■□□□□ 0.18
FAM50A-207ENST00000494278 CDCA8Q53HL2 280 aa16.18■□□□□ 0.18
FAM50A-207ENST00000494278 AATKQ6ZMQ8 1374 aa16.17■□□□□ 0.18
FAM50A-207ENST00000494278 CHRNA2Q15822 529 aa16.17■□□□□ 0.18
FAM50A-207ENST00000494278 LTN1O94822 1766 aa16.17■□□□□ 0.18
FAM50A-207ENST00000494278 KIF20BQ96Q89 1820 aa16.17■□□□□ 0.18
FAM50A-207ENST00000494278 ONECUT3O60422 494 aaPredicted RBP16.16■□□□□ 0.18
FAM50A-207ENST00000494278 KCNH5Q8NCM2 988 aa16.16■□□□□ 0.18
FAM50A-207ENST00000494278 SPATA31A5Q5VU36 1347 aa16.16■□□□□ 0.18
FAM50A-207ENST00000494278 SPATA31A7Q8IWB4 1347 aa16.16■□□□□ 0.18
FAM50A-207ENST00000494278 EP400Q96L91 3159 aa16.16■□□□□ 0.18
FAM50A-207ENST00000494278 WNK3Q9BYP7 1800 aa16.15■□□□□ 0.18
FAM50A-207ENST00000494278 RGPD5Q99666 1765 aa16.15■□□□□ 0.18
FAM50A-207ENST00000494278 EIF4G2P78344 907 aaKnown RBP eCLIP16.14■□□□□ 0.17
FAM50A-207ENST00000494278 NME9Q86XW9 330 aa16.14■□□□□ 0.17
FAM50A-207ENST00000494278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.13■□□□□ 0.17
FAM50A-207ENST00000494278 UPF1Q92900 1129 aaKnown RBP eCLIP16.13■□□□□ 0.17
FAM50A-207ENST00000494278 CCDC9Q9Y3X0 531 aaKnown RBP16.13■□□□□ 0.17
FAM50A-207ENST00000494278 SPATA31A1Q5TZJ5 1347 aa16.13■□□□□ 0.17
FAM50A-207ENST00000494278 HSPA5P11021 654 aaKnown RBP16.12■□□□□ 0.17
FAM50A-207ENST00000494278 ARHGEF25Q86VW2 580 aa16.12■□□□□ 0.17
FAM50A-207ENST00000494278 PARP4Q9UKK3 1724 aaKnown RBP16.11■□□□□ 0.17
FAM50A-207ENST00000494278 SEPT12Q8IYM1 358 aa16.11■□□□□ 0.17
FAM50A-207ENST00000494278 STRN4Q9NRL3 753 aa16.11■□□□□ 0.17
FAM50A-207ENST00000494278 ZRANB1Q9UGI0 708 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms