RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 MARF1Q9Y4F3 1742 aaKnown RBP16.53■□□□□ 0.24
UBA3-211ENST00000493957 SRPK2P78362 688 aaKnown RBP16.53■□□□□ 0.24
UBA3-211ENST00000493957 AKAP12Q02952 1782 aa16.53■□□□□ 0.24
UBA3-211ENST00000493957 DISP3Q9P2K9 1392 aa16.52■□□□□ 0.24
UBA3-211ENST00000493957 KRT28Q7Z3Y7 464 aa16.52■□□□□ 0.24
UBA3-211ENST00000493957 LRRC59Q96AG4 307 aaKnown RBP16.52■□□□□ 0.24
UBA3-211ENST00000493957 USP47Q96K76 1375 aa16.51■□□□□ 0.23
UBA3-211ENST00000493957 SBNO2Q9Y2G9 1366 aa16.51■□□□□ 0.23
UBA3-211ENST00000493957 PPIP5K1Q6PFW1 1433 aa16.51■□□□□ 0.23
UBA3-211ENST00000493957 CRYBG1Q9Y4K1 1723 aa16.5■□□□□ 0.23
UBA3-211ENST00000493957 EVC2Q86UK5 1308 aa16.5■□□□□ 0.23
UBA3-211ENST00000493957 ST20-MTHFSA0A0A6YYL1 179 aa16.5■□□□□ 0.23
UBA3-211ENST00000493957 NUTM2BA6NNL0 878 aaPredicted RBP16.49■□□□□ 0.23
UBA3-211ENST00000493957 NUTM2EB1AL46 878 aaPredicted RBP16.49■□□□□ 0.23
UBA3-211ENST00000493957 TNS3Q68CZ2 1445 aa16.49■□□□□ 0.23
UBA3-211ENST00000493957 NUTM2AQ8IVF1 878 aaPredicted RBP16.49■□□□□ 0.23
UBA3-211ENST00000493957 TESK2Q96S53 571 aa16.49■□□□□ 0.23
UBA3-211ENST00000493957 SPATA31A6Q5VVP1 1343 aa16.48■□□□□ 0.23
UBA3-211ENST00000493957 SPATA31A3Q5VYP0 1347 aa16.48■□□□□ 0.23
UBA3-211ENST00000493957 PSME1Q06323 249 aa16.48■□□□□ 0.23
UBA3-211ENST00000493957 CCDC61Q9Y6R9 512 aa16.48■□□□□ 0.23
UBA3-211ENST00000493957 NGDNQ8NEJ9 315 aaKnown RBP16.47■□□□□ 0.23
UBA3-211ENST00000493957 POLR3AO14802 1390 aaPredicted RBP16.47■□□□□ 0.23
UBA3-211ENST00000493957 MON2Q7Z3U7 1717 aa16.47■□□□□ 0.23
UBA3-211ENST00000493957 ACEP12821 1306 aa16.46■□□□□ 0.23
UBA3-211ENST00000493957 PLEKHG3A1L390 1219 aa16.46■□□□□ 0.23
UBA3-211ENST00000493957 SBNO1A3KN83 1393 aa16.46■□□□□ 0.23
UBA3-211ENST00000493957 PLEKHG5O94827 1062 aa16.45■□□□□ 0.22
UBA3-211ENST00000493957 EVX2Q03828 476 aa16.45■□□□□ 0.22
UBA3-211ENST00000493957 CABP1Q9NZU7 370 aa16.45■□□□□ 0.22
UBA3-211ENST00000493957 NRKQ7Z2Y5 1582 aa16.45■□□□□ 0.22
UBA3-211ENST00000493957 PHRF1Q9P1Y6 1649 aaKnown RBP16.45■□□□□ 0.22
UBA3-211ENST00000493957 RGS17Q9UGC6 210 aaPredicted RBP16.44■□□□□ 0.22
UBA3-211ENST00000493957 MYOM1P52179 1685 aa16.43■□□□□ 0.22
UBA3-211ENST00000493957 LMOD2Q6P5Q4 547 aa16.43■□□□□ 0.22
UBA3-211ENST00000493957 PIK3C2AO00443 1686 aa16.43■□□□□ 0.22
UBA3-211ENST00000493957 ADAMTS2O95450 1211 aa16.42■□□□□ 0.22
UBA3-211ENST00000493957 CABLES1Q8TDN4 633 aa16.42■□□□□ 0.22
UBA3-211ENST00000493957 CD163L1Q9NR16 1453 aa16.42■□□□□ 0.22
UBA3-211ENST00000493957 ATAD2Q6PL18 1390 aa16.41■□□□□ 0.22
UBA3-211ENST00000493957 MEX3CQ5U5Q3 659 aaKnown RBP16.41■□□□□ 0.22
UBA3-211ENST00000493957 USP6P35125 1406 aa16.41■□□□□ 0.22
UBA3-211ENST00000493957 PLCH1Q4KWH8 1693 aa16.4■□□□□ 0.22
UBA3-211ENST00000493957 PAK3O75914 559 aaPredicted RBP16.4■□□□□ 0.22
UBA3-211ENST00000493957 ILDR2Q71H61 639 aa16.4■□□□□ 0.22
UBA3-211ENST00000493957 ARHGEF10O15013 1369 aa16.39■□□□□ 0.21
UBA3-211ENST00000493957 CPSF1Q10570 1443 aaKnown RBP16.38■□□□□ 0.21
UBA3-211ENST00000493957 SSH2Q76I76 1423 aa16.38■□□□□ 0.21
UBA3-211ENST00000493957 HSPA5P11021 654 aaKnown RBP16.38■□□□□ 0.21
UBA3-211ENST00000493957 NUTM2GQ5VZR2 741 aa16.38■□□□□ 0.21
UBA3-211ENST00000493957 C8orf37Q96NL8 207 aa16.38■□□□□ 0.21
UBA3-211ENST00000493957 SLC12A5Q9H2X9 1139 aa16.37■□□□□ 0.21
UBA3-211ENST00000493957 POTEAQ6S8J7 498 aa16.36■□□□□ 0.21
UBA3-211ENST00000493957 TMC1Q8TDI8 760 aa16.36■□□□□ 0.21
UBA3-211ENST00000493957 AFF2P51816 1311 aa16.36■□□□□ 0.21
UBA3-211ENST00000493957 TMF1P82094 1093 aa16.35■□□□□ 0.21
UBA3-211ENST00000493957 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.35■□□□□ 0.21
UBA3-211ENST00000493957 EIF4G2P78344 907 aaKnown RBP eCLIP16.34■□□□□ 0.21
UBA3-211ENST00000493957 A0A1W2PP64 1363 aa16.34■□□□□ 0.21
UBA3-211ENST00000493957 KTN1Q86UP2 1357 aaKnown RBP16.34■□□□□ 0.21
UBA3-211ENST00000493957 USP54Q70EL1 1684 aa16.34■□□□□ 0.21
UBA3-211ENST00000493957 NRAPQ86VF7 1730 aa16.33■□□□□ 0.21
UBA3-211ENST00000493957 PUS7Q96PZ0 661 aaKnown RBP16.33■□□□□ 0.2
UBA3-211ENST00000493957 NWD2Q9ULI1 1742 aa16.33■□□□□ 0.2
UBA3-211ENST00000493957 COL14A1Q05707 1796 aaKnown RBP16.32■□□□□ 0.2
UBA3-211ENST00000493957 ABTB2Q8N961 1025 aa16.32■□□□□ 0.2
UBA3-211ENST00000493957 NGLY1Q96IV0 654 aa16.32■□□□□ 0.2
UBA3-211ENST00000493957 FOXD4L1Q9NU39 408 aa16.32■□□□□ 0.2
UBA3-211ENST00000493957 KIF20BQ96Q89 1820 aa16.31■□□□□ 0.2
UBA3-211ENST00000493957 RGPD5Q99666 1765 aa16.31■□□□□ 0.2
UBA3-211ENST00000493957 TTC21BQ7Z4L5 1316 aa16.31■□□□□ 0.2
UBA3-211ENST00000493957 HAP1P54257 671 aaPredicted RBP16.31■□□□□ 0.2
UBA3-211ENST00000493957 SLIT3O75094 1523 aa16.3■□□□□ 0.2
UBA3-211ENST00000493957 BRD4O60885 1362 aaPredicted RBP16.3■□□□□ 0.2
UBA3-211ENST00000493957 USP19O94966 1318 aa16.3■□□□□ 0.2
UBA3-211ENST00000493957 ZRANB1Q9UGI0 708 aa16.3■□□□□ 0.2
UBA3-211ENST00000493957 SLIT2O94813 1529 aa16.29■□□□□ 0.2
UBA3-211ENST00000493957 BCL9LQ86UU0 1499 aa16.29■□□□□ 0.2
UBA3-211ENST00000493957 C11orf95C9JLR9 678 aaPredicted RBP16.29■□□□□ 0.2
UBA3-211ENST00000493957 ZNF692Q9BU19 519 aaPredicted RBP16.29■□□□□ 0.2
UBA3-211ENST00000493957 LTN1O94822 1766 aa16.28■□□□□ 0.2
UBA3-211ENST00000493957 NINLQ9Y2I6 1382 aa16.28■□□□□ 0.2
UBA3-211ENST00000493957 SLC24A1O60721 1099 aa16.28■□□□□ 0.2
UBA3-211ENST00000493957 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.28■□□□□ 0.2
UBA3-211ENST00000493957 EDC4Q6P2E9 1401 aaKnown RBP16.28■□□□□ 0.2
UBA3-211ENST00000493957 LMO7Q8WWI1 1683 aa16.27■□□□□ 0.2
UBA3-211ENST00000493957 FAM83GA6ND36 823 aa16.27■□□□□ 0.2
UBA3-211ENST00000493957 ZNF772Q68DY9 489 aaPredicted RBP16.27■□□□□ 0.2
UBA3-211ENST00000493957 HDGFL2Q7Z4V5 671 aaPredicted RBP16.27■□□□□ 0.2
UBA3-211ENST00000493957 NME9Q86XW9 330 aa16.27■□□□□ 0.2
UBA3-211ENST00000493957 FNBP4Q8N3X1 1017 aaPredicted RBP16.27■□□□□ 0.2
UBA3-211ENST00000493957 POLR3GLQ9BT43 218 aa16.27■□□□□ 0.2
UBA3-211ENST00000493957 USP21Q9UK80 565 aa16.27■□□□□ 0.2
UBA3-211ENST00000493957 COL18A1P39060 1754 aa16.27■□□□□ 0.2
UBA3-211ENST00000493957 ANKRD36BQ8N2N9 1353 aa16.26■□□□□ 0.19
UBA3-211ENST00000493957 KIAA0232Q92628 1395 aa16.26■□□□□ 0.19
UBA3-211ENST00000493957 NLRP6P59044 892 aa16.26■□□□□ 0.19
UBA3-211ENST00000493957 ZC3H6P61129 1189 aaKnown RBP16.26■□□□□ 0.19
UBA3-211ENST00000493957 GLI3P10071 1580 aa16.26■□□□□ 0.19
UBA3-211ENST00000493957 NFAT5O94916 1531 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms