RNA–Protein interactions for RNA: ENST00000493658.2

ARID1B-208, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 3

Gene ARID1B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-208ENST00000493658 HDGFL2Q7Z4V5 671 aaPredicted RBP18■□□□□ 0.47
ARID1B-208ENST00000493658 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
ARID1B-208ENST00000493658 CENPQQ7L2Z9 268 aaPredicted RBP17.99■□□□□ 0.47
ARID1B-208ENST00000493658 KDM2BQ8NHM5 1336 aa17.98■□□□□ 0.47
ARID1B-208ENST00000493658 ANP32AP39687 249 aaKnown RBP17.98■□□□□ 0.47
ARID1B-208ENST00000493658 TCP11L2Q8N4U5 519 aa17.98■□□□□ 0.47
ARID1B-208ENST00000493658 CDC42BPGQ6DT37 1551 aa17.98■□□□□ 0.47
ARID1B-208ENST00000493658 CDK19Q9BWU1 502 aa17.97■□□□□ 0.47
ARID1B-208ENST00000493658 ZNF142P52746 1687 aaPredicted RBP17.96■□□□□ 0.47
ARID1B-208ENST00000493658 UBR1Q8IWV7 1749 aa17.96■□□□□ 0.47
ARID1B-208ENST00000493658 ZMYM3Q14202 1370 aa17.94■□□□□ 0.46
ARID1B-208ENST00000493658 TNRQ92752 1358 aa17.94■□□□□ 0.46
ARID1B-208ENST00000493658 PDE3AQ14432 1141 aa17.94■□□□□ 0.46
ARID1B-208ENST00000493658 TECPR2O15040 1411 aa17.94■□□□□ 0.46
ARID1B-208ENST00000493658 FAM135BQ49AJ0 1406 aa17.94■□□□□ 0.46
ARID1B-208ENST00000493658 FYB1O15117 783 aa17.93■□□□□ 0.46
ARID1B-208ENST00000493658 U2AF1L5P0DN76 240 aaPredicted RBP17.93■□□□□ 0.46
ARID1B-208ENST00000493658 HDGFP51858 240 aaKnown RBP17.93■□□□□ 0.46
ARID1B-208ENST00000493658 U2AF1Q01081 240 aaKnown RBP eCLIP17.93■□□□□ 0.46
ARID1B-208ENST00000493658 IFFO2Q5TF58 517 aa17.93■□□□□ 0.46
ARID1B-208ENST00000493658 MON2Q7Z3U7 1717 aa17.92■□□□□ 0.46
ARID1B-208ENST00000493658 PDE4AP27815 886 aa17.92■□□□□ 0.46
ARID1B-208ENST00000493658 SIRT1Q96EB6 747 aa17.92■□□□□ 0.46
ARID1B-208ENST00000493658 GGNBP2Q9H3C7 697 aa17.92■□□□□ 0.46
ARID1B-208ENST00000493658 MYH16Q9H6N6 1097 aa17.92■□□□□ 0.46
ARID1B-208ENST00000493658 ITSN1Q15811 1721 aa17.92■□□□□ 0.46
ARID1B-208ENST00000493658 CEP170BQ9Y4F5 1589 aaPredicted RBP17.91■□□□□ 0.46
ARID1B-208ENST00000493658 BCAR3O75815 825 aa17.91■□□□□ 0.46
ARID1B-208ENST00000493658 BACH2Q9BYV9 841 aa17.91■□□□□ 0.46
ARID1B-208ENST00000493658 NOP58Q9Y2X3 529 aaKnown RBP17.91■□□□□ 0.46
ARID1B-208ENST00000493658 AKAP12Q02952 1782 aa17.91■□□□□ 0.46
ARID1B-208ENST00000493658 PNPLA6Q8IY17 1366 aa17.91■□□□□ 0.46
ARID1B-208ENST00000493658 AAMPQ13685 434 aa17.9■□□□□ 0.46
ARID1B-208ENST00000493658 PNNQ9H307 717 aaKnown RBP17.9■□□□□ 0.46
ARID1B-208ENST00000493658 RRP7AQ9Y3A4 280 aaKnown RBP17.9■□□□□ 0.46
ARID1B-208ENST00000493658 EDC4Q6P2E9 1401 aaKnown RBP17.89■□□□□ 0.46
ARID1B-208ENST00000493658 IPO9Q96P70 1041 aaKnown RBP17.89■□□□□ 0.45
ARID1B-208ENST00000493658 CT47B1P0C2W7 299 aaPredicted RBP17.88■□□□□ 0.45
ARID1B-208ENST00000493658 CANXP27824 592 aaKnown RBP17.88■□□□□ 0.45
ARID1B-208ENST00000493658 NEUROD2Q15784 382 aa17.88■□□□□ 0.45
ARID1B-208ENST00000493658 CABP1Q9NZU7 370 aa17.88■□□□□ 0.45
ARID1B-208ENST00000493658 CPSF1Q10570 1443 aaKnown RBP17.88■□□□□ 0.45
ARID1B-208ENST00000493658 IL16Q14005 1332 aa17.87■□□□□ 0.45
ARID1B-208ENST00000493658 MAPK8IP3Q9UPT6 1336 aa17.87■□□□□ 0.45
ARID1B-208ENST00000493658 WASLO00401 505 aaPredicted RBP17.86■□□□□ 0.45
ARID1B-208ENST00000493658 RARSP54136 660 aaKnown RBP17.86■□□□□ 0.45
ARID1B-208ENST00000493658 PLEKHF1Q96S99 279 aa17.86■□□□□ 0.45
ARID1B-208ENST00000493658 METP08581 1390 aa17.86■□□□□ 0.45
ARID1B-208ENST00000493658 PPIP5K1Q6PFW1 1433 aa17.86■□□□□ 0.45
ARID1B-208ENST00000493658 U2SURPO15042 1029 aaKnown RBP17.85■□□□□ 0.45
ARID1B-208ENST00000493658 DIAPH1O60610 1272 aaKnown RBP17.85■□□□□ 0.45
ARID1B-208ENST00000493658 WAPLQ7Z5K2 1190 aa17.85■□□□□ 0.45
ARID1B-208ENST00000493658 LRRC7Q96NW7 1537 aa17.85■□□□□ 0.45
ARID1B-208ENST00000493658 TMEM2Q9UHN6 1383 aa17.85■□□□□ 0.45
ARID1B-208ENST00000493658 MAP2P11137 1827 aaKnown RBP17.84■□□□□ 0.45
ARID1B-208ENST00000493658 VIRMAQ69YN4 1812 aaKnown RBP17.84■□□□□ 0.45
ARID1B-208ENST00000493658 TOPAZ1Q8N9V7 1692 aa17.83■□□□□ 0.45
ARID1B-208ENST00000493658 CDK12Q9NYV4 1490 aaPredicted RBP17.83■□□□□ 0.45
ARID1B-208ENST00000493658 TMPOP42166 694 aaKnown RBP17.83■□□□□ 0.44
ARID1B-208ENST00000493658 PLEKHG1Q9ULL1 1385 aa17.81■□□□□ 0.44
ARID1B-208ENST00000493658 CLUAP1Q96AJ1 413 aa17.81■□□□□ 0.44
ARID1B-208ENST00000493658 AATKQ6ZMQ8 1374 aa17.8■□□□□ 0.44
ARID1B-208ENST00000493658 NRKQ7Z2Y5 1582 aa17.8■□□□□ 0.44
ARID1B-208ENST00000493658 ZBTB47Q9UFB7 747 aaPredicted RBP17.8■□□□□ 0.44
ARID1B-208ENST00000493658 ADAMTS13Q76LX8 1427 aa17.8■□□□□ 0.44
ARID1B-208ENST00000493658 FCHSD2O94868 740 aa17.79■□□□□ 0.44
ARID1B-208ENST00000493658 PANK1Q8TE04 598 aa17.78■□□□□ 0.44
ARID1B-208ENST00000493658 NUDT16Q96DE0 195 aaKnown RBP17.78■□□□□ 0.44
ARID1B-208ENST00000493658 TRIM35Q9UPQ4 493 aa17.78■□□□□ 0.44
ARID1B-208ENST00000493658 FAM161AQ3B820 660 aa17.77■□□□□ 0.44
ARID1B-208ENST00000493658 TXNDC2Q86VQ3 553 aa17.77■□□□□ 0.44
ARID1B-208ENST00000493658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.77■□□□□ 0.44
ARID1B-208ENST00000493658 PMFBP1Q8TBY8 1022 aa17.77■□□□□ 0.44
ARID1B-208ENST00000493658 FRAT1Q92837 279 aaPredicted RBP17.77■□□□□ 0.44
ARID1B-208ENST00000493658 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.44
ARID1B-208ENST00000493658 COG6Q9Y2V7 657 aa17.77■□□□□ 0.44
ARID1B-208ENST00000493658 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.77■□□□□ 0.44
ARID1B-208ENST00000493658 SLIT1O75093 1534 aa17.77■□□□□ 0.43
ARID1B-208ENST00000493658 DIP2AQ14689 1571 aa17.76■□□□□ 0.43
ARID1B-208ENST00000493658 NEFMP07197 916 aa17.76■□□□□ 0.43
ARID1B-208ENST00000493658 DDRGK1Q96HY6 314 aa17.76■□□□□ 0.43
ARID1B-208ENST00000493658 POLKQ9UBT6 870 aa17.76■□□□□ 0.43
ARID1B-208ENST00000493658 NPM2Q86SE8 214 aaKnown RBP17.75■□□□□ 0.43
ARID1B-208ENST00000493658 RBM33Q96EV2 1170 aaKnown RBP17.75■□□□□ 0.43
ARID1B-208ENST00000493658 CCDC61Q9Y6R9 512 aa17.75■□□□□ 0.43
ARID1B-208ENST00000493658 ARHGAP23Q9P227 1491 aa17.75■□□□□ 0.43
ARID1B-208ENST00000493658 PAK3O75914 559 aaPredicted RBP17.74■□□□□ 0.43
ARID1B-208ENST00000493658 RIPK4P57078 832 aa17.74■□□□□ 0.43
ARID1B-208ENST00000493658 ZKSCAN2Q63HK3 967 aa17.74■□□□□ 0.43
ARID1B-208ENST00000493658 SKAP1Q86WV1 359 aa17.74■□□□□ 0.43
ARID1B-208ENST00000493658 ZNF692Q9BU19 519 aaPredicted RBP17.74■□□□□ 0.43
ARID1B-208ENST00000493658 RSPH6AQ9H0K4 717 aa17.74■□□□□ 0.43
ARID1B-208ENST00000493658 ROBO2Q9HCK4 1378 aa17.74■□□□□ 0.43
ARID1B-208ENST00000493658 NALCNQ8IZF0 1738 aa17.73■□□□□ 0.43
ARID1B-208ENST00000493658 IGHDP01880 384 aa17.72■□□□□ 0.43
ARID1B-208ENST00000493658 CALD1Q05682 793 aaKnown RBP17.72■□□□□ 0.43
ARID1B-208ENST00000493658 EXOSC9Q06265 439 aaKnown RBP17.72■□□□□ 0.43
ARID1B-208ENST00000493658 ZNF772Q68DY9 489 aaPredicted RBP17.72■□□□□ 0.43
ARID1B-208ENST00000493658 COG3Q96JB2 828 aa17.72■□□□□ 0.43
ARID1B-208ENST00000493658 NFE2L2Q16236 605 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms