RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 TESK2Q96S53 571 aa19.46■□□□□ 0.71
PDCD11-206ENST00000493610 CABP1Q9NZU7 370 aa19.46■□□□□ 0.71
PDCD11-206ENST00000493610 PHRF1Q9P1Y6 1649 aaKnown RBP19.46■□□□□ 0.71
PDCD11-206ENST00000493610 PLCH1Q4KWH8 1693 aa19.46■□□□□ 0.71
PDCD11-206ENST00000493610 AKAP12Q02952 1782 aa19.45■□□□□ 0.7
PDCD11-206ENST00000493610 QTRT2Q9H974 415 aaKnown RBP19.45■□□□□ 0.7
PDCD11-206ENST00000493610 USP21Q9UK80 565 aa19.45■□□□□ 0.7
PDCD11-206ENST00000493610 CDK12Q9NYV4 1490 aaPredicted RBP19.45■□□□□ 0.7
PDCD11-206ENST00000493610 LMOD2Q6P5Q4 547 aa19.44■□□□□ 0.7
PDCD11-206ENST00000493610 USP6P35125 1406 aa19.43■□□□□ 0.7
PDCD11-206ENST00000493610 PLEKHG5O94827 1062 aa19.43■□□□□ 0.7
PDCD11-206ENST00000493610 RGS12O14924 1447 aa19.42■□□□□ 0.7
PDCD11-206ENST00000493610 NRAPQ86VF7 1730 aa19.42■□□□□ 0.7
PDCD11-206ENST00000493610 CD163L1Q9NR16 1453 aa19.42■□□□□ 0.7
PDCD11-206ENST00000493610 NRKQ7Z2Y5 1582 aa19.42■□□□□ 0.7
PDCD11-206ENST00000493610 RXRBP28702 533 aa19.42■□□□□ 0.7
PDCD11-206ENST00000493610 TIMELESSQ9UNS1 1208 aa19.42■□□□□ 0.7
PDCD11-206ENST00000493610 NWD2Q9ULI1 1742 aa19.42■□□□□ 0.7
PDCD11-206ENST00000493610 CPSF1Q10570 1443 aaKnown RBP19.42■□□□□ 0.7
PDCD11-206ENST00000493610 GLI3P10071 1580 aa19.41■□□□□ 0.7
PDCD11-206ENST00000493610 FAM83GA6ND36 823 aa19.41■□□□□ 0.7
PDCD11-206ENST00000493610 PAK3O75914 559 aaPredicted RBP19.41■□□□□ 0.7
PDCD11-206ENST00000493610 ST20-MTHFSA0A0A6YYL1 179 aa19.4■□□□□ 0.7
PDCD11-206ENST00000493610 RBM6P78332 1123 aaKnown RBP19.4■□□□□ 0.7
PDCD11-206ENST00000493610 PIK3C2AO00443 1686 aa19.4■□□□□ 0.7
PDCD11-206ENST00000493610 NUTM2GQ5VZR2 741 aa19.39■□□□□ 0.69
PDCD11-206ENST00000493610 USP19O94966 1318 aa19.39■□□□□ 0.69
PDCD11-206ENST00000493610 MON2Q7Z3U7 1717 aa19.39■□□□□ 0.69
PDCD11-206ENST00000493610 COL14A1Q05707 1796 aaKnown RBP19.38■□□□□ 0.69
PDCD11-206ENST00000493610 ATAD2Q6PL18 1390 aa19.38■□□□□ 0.69
PDCD11-206ENST00000493610 TRPC5Q9UL62 973 aaPredicted RBP19.38■□□□□ 0.69
PDCD11-206ENST00000493610 BRD4O60885 1362 aaPredicted RBP19.37■□□□□ 0.69
PDCD11-206ENST00000493610 UNC5CLQ8IV45 518 aa19.37■□□□□ 0.69
PDCD11-206ENST00000493610 USP47Q96K76 1375 aa19.36■□□□□ 0.69
PDCD11-206ENST00000493610 CCER1Q8TC90 406 aaPredicted RBP19.35■□□□□ 0.69
PDCD11-206ENST00000493610 SLIT3O75094 1523 aa19.35■□□□□ 0.69
PDCD11-206ENST00000493610 ABTB2Q8N961 1025 aa19.34■□□□□ 0.69
PDCD11-206ENST00000493610 LMO7Q8WWI1 1683 aa19.33■□□□□ 0.69
PDCD11-206ENST00000493610 KIAA0232Q92628 1395 aa19.33■□□□□ 0.69
PDCD11-206ENST00000493610 HAP1P54257 671 aaPredicted RBP19.33■□□□□ 0.68
PDCD11-206ENST00000493610 GJD4Q96KN9 370 aaPredicted RBP19.33■□□□□ 0.68
PDCD11-206ENST00000493610 PUS7Q96PZ0 661 aaKnown RBP19.33■□□□□ 0.68
PDCD11-206ENST00000493610 TTC21BQ7Z4L5 1316 aa19.32■□□□□ 0.68
PDCD11-206ENST00000493610 SLC12A5Q9H2X9 1139 aa19.32■□□□□ 0.68
PDCD11-206ENST00000493610 VPS72Q15906 364 aa19.31■□□□□ 0.68
PDCD11-206ENST00000493610 USP54Q70EL1 1684 aa19.3■□□□□ 0.68
PDCD11-206ENST00000493610 ZNF692Q9BU19 519 aaPredicted RBP19.3■□□□□ 0.68
PDCD11-206ENST00000493610 BTG4Q9NY30 223 aa19.3■□□□□ 0.68
PDCD11-206ENST00000493610 CPDO75976 1380 aa19.3■□□□□ 0.68
PDCD11-206ENST00000493610 CAMTA1Q9Y6Y1 1673 aa19.3■□□□□ 0.68
PDCD11-206ENST00000493610 ZC3H6P61129 1189 aaKnown RBP19.29■□□□□ 0.68
PDCD11-206ENST00000493610 CHRNA2Q15822 529 aa19.29■□□□□ 0.68
PDCD11-206ENST00000493610 KTN1Q86UP2 1357 aaKnown RBP19.29■□□□□ 0.68
PDCD11-206ENST00000493610 COL18A1P39060 1754 aa19.29■□□□□ 0.68
PDCD11-206ENST00000493610 BRWD3Q6RI45 1802 aa19.28■□□□□ 0.68
PDCD11-206ENST00000493610 GCP02774 474 aa19.28■□□□□ 0.68
PDCD11-206ENST00000493610 NLRP13Q86W25 1043 aa19.28■□□□□ 0.68
PDCD11-206ENST00000493610 A0A1W2PP64 1363 aa19.28■□□□□ 0.68
PDCD11-206ENST00000493610 UPF1Q92900 1129 aaKnown RBP eCLIP19.27■□□□□ 0.68
PDCD11-206ENST00000493610 PRDM11Q9NQV5 511 aa19.27■□□□□ 0.68
PDCD11-206ENST00000493610 ZRANB1Q9UGI0 708 aa19.27■□□□□ 0.68
PDCD11-206ENST00000493610 ONECUT3O60422 494 aaPredicted RBP19.26■□□□□ 0.67
PDCD11-206ENST00000493610 NLRP6P59044 892 aa19.26■□□□□ 0.67
PDCD11-206ENST00000493610 TTC21AQ8NDW8 1320 aa19.25■□□□□ 0.67
PDCD11-206ENST00000493610 NFAT5O94916 1531 aa19.25■□□□□ 0.67
PDCD11-206ENST00000493610 MYOM1P52179 1685 aa19.25■□□□□ 0.67
PDCD11-206ENST00000493610 USP31Q70CQ4 1352 aa19.24■□□□□ 0.67
PDCD11-206ENST00000493610 TMC1Q8TDI8 760 aa19.23■□□□□ 0.67
PDCD11-206ENST00000493610 EDC4Q6P2E9 1401 aaKnown RBP19.23■□□□□ 0.67
PDCD11-206ENST00000493610 THSD7AQ9UPZ6 1657 aa19.23■□□□□ 0.67
PDCD11-206ENST00000493610 SPATA31A5Q5VU36 1347 aa19.23■□□□□ 0.67
PDCD11-206ENST00000493610 SPATA31A7Q8IWB4 1347 aa19.23■□□□□ 0.67
PDCD11-206ENST00000493610 NME9Q86XW9 330 aa19.22■□□□□ 0.67
PDCD11-206ENST00000493610 NINLQ9Y2I6 1382 aa19.21■□□□□ 0.67
PDCD11-206ENST00000493610 OVOS2A0A0J9YW53 1432 aa19.2■□□□□ 0.66
PDCD11-206ENST00000493610 OVOS2Q6IE36 1432 aa19.2■□□□□ 0.66
PDCD11-206ENST00000493610 RGPD5Q99666 1765 aa19.2■□□□□ 0.66
PDCD11-206ENST00000493610 TMF1P82094 1093 aa19.2■□□□□ 0.66
PDCD11-206ENST00000493610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.2■□□□□ 0.66
PDCD11-206ENST00000493610 COL5A2P05997 1499 aaPredicted RBP19.2■□□□□ 0.66
PDCD11-206ENST00000493610 ARHGEF25Q86VW2 580 aa19.19■□□□□ 0.66
PDCD11-206ENST00000493610 SEPT12Q8IYM1 358 aa19.19■□□□□ 0.66
PDCD11-206ENST00000493610 SPATA31A1Q5TZJ5 1347 aa19.19■□□□□ 0.66
PDCD11-206ENST00000493610 AATKQ6ZMQ8 1374 aa19.19■□□□□ 0.66
PDCD11-206ENST00000493610 SLC24A1O60721 1099 aa19.18■□□□□ 0.66
PDCD11-206ENST00000493610 HDGFL2Q7Z4V5 671 aaPredicted RBP19.18■□□□□ 0.66
PDCD11-206ENST00000493610 AXIN2Q9Y2T1 843 aa19.18■□□□□ 0.66
PDCD11-206ENST00000493610 ANKRD36BQ8N2N9 1353 aa19.18■□□□□ 0.66
PDCD11-206ENST00000493610 EP400Q96L91 3159 aa19.18■□□□□ 0.66
PDCD11-206ENST00000493610 TERF2IPQ9NYB0 399 aa19.17■□□□□ 0.66
PDCD11-206ENST00000493610 HSPA5P11021 654 aaKnown RBP19.16■□□□□ 0.66
PDCD11-206ENST00000493610 FAM98CQ17RN3 349 aaKnown RBP19.16■□□□□ 0.66
PDCD11-206ENST00000493610 LARP1Q6PKG0 1096 aaKnown RBP19.16■□□□□ 0.66
PDCD11-206ENST00000493610 CCDC9Q9Y3X0 531 aaKnown RBP19.16■□□□□ 0.66
PDCD11-206ENST00000493610 STRN4Q9NRL3 753 aa19.15■□□□□ 0.66
PDCD11-206ENST00000493610 LTN1O94822 1766 aa19.14■□□□□ 0.65
PDCD11-206ENST00000493610 CARD14Q9BXL6 1004 aa19.13■□□□□ 0.65
PDCD11-206ENST00000493610 ABCC6O95255 1503 aa19.12■□□□□ 0.65
PDCD11-206ENST00000493610 C11orf95C9JLR9 678 aaPredicted RBP19.12■□□□□ 0.65
PDCD11-206ENST00000493610 SOX12O15370 315 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms