RNA–Protein interactions for RNA: ENST00000493359.1

NCKAP1-207, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 615 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-207ENST00000493359 PLEKHG3A1L390 1219 aa9.54□□□□□ -0.88
NCKAP1-207ENST00000493359 EFCAB6Q5THR3 1501 aa9.53□□□□□ -0.88
NCKAP1-207ENST00000493359 LMTK2Q8IWU2 1503 aa9.53□□□□□ -0.88
NCKAP1-207ENST00000493359 ARHGEF40Q8TER5 1519 aa9.53□□□□□ -0.88
NCKAP1-207ENST00000493359 E9PCH4 1651 aa9.53□□□□□ -0.88
NCKAP1-207ENST00000493359 YEATS2Q9ULM3 1422 aa9.53□□□□□ -0.88
NCKAP1-207ENST00000493359 TRPM2O94759 1503 aa9.52□□□□□ -0.88
NCKAP1-207ENST00000493359 ZC3H13Q5T200 1668 aaKnown RBP9.52□□□□□ -0.89
NCKAP1-207ENST00000493359 SPHKAPQ2M3C7 1700 aa9.52□□□□□ -0.89
NCKAP1-207ENST00000493359 REREQ9P2R6 1566 aa9.52□□□□□ -0.89
NCKAP1-207ENST00000493359 ATP10AO60312 1499 aa9.52□□□□□ -0.89
NCKAP1-207ENST00000493359 CEP152O94986 1710 aa9.51□□□□□ -0.89
NCKAP1-207ENST00000493359 PTGDRQ13258 359 aa9.51□□□□□ -0.89
NCKAP1-207ENST00000493359 DOK7Q18PE1 504 aa9.51□□□□□ -0.89
NCKAP1-207ENST00000493359 L3MBTL2Q969R5 705 aa9.51□□□□□ -0.89
NCKAP1-207ENST00000493359 FLIIQ13045 1269 aa9.5□□□□□ -0.89
NCKAP1-207ENST00000493359 GGT6Q6P531 493 aa9.5□□□□□ -0.89
NCKAP1-207ENST00000493359 ZNF710Q8N1W2 664 aa9.5□□□□□ -0.89
NCKAP1-207ENST00000493359 CAMSAP1Q5T5Y3 1602 aa9.49□□□□□ -0.89
NCKAP1-207ENST00000493359 POTEMA6NI47 508 aa9.49□□□□□ -0.89
NCKAP1-207ENST00000493359 MARVELD3Q96A59 401 aa9.49□□□□□ -0.89
NCKAP1-207ENST00000493359 ABCC3O15438 1527 aa9.49□□□□□ -0.89
NCKAP1-207ENST00000493359 AGLP35573 1532 aa9.48□□□□□ -0.89
NCKAP1-207ENST00000493359 POTEGQ6S5H5 508 aa9.48□□□□□ -0.89
NCKAP1-207ENST00000493359 GIGYF2Q6Y7W6 1299 aaKnown RBP9.48□□□□□ -0.89
NCKAP1-207ENST00000493359 GOPCQ9HD26 462 aa9.48□□□□□ -0.89
NCKAP1-207ENST00000493359 WASHC2CQ9Y4E1 1318 aa9.48□□□□□ -0.89
NCKAP1-207ENST00000493359 PLA2R1Q13018 1463 aa9.47□□□□□ -0.89
NCKAP1-207ENST00000493359 PRIM1P49642 420 aaKnown RBP9.47□□□□□ -0.89
NCKAP1-207ENST00000493359 DIEXFQ68CQ4 756 aaKnown RBP9.47□□□□□ -0.89
NCKAP1-207ENST00000493359 PTPRTO14522 1441 aa9.47□□□□□ -0.89
NCKAP1-207ENST00000493359 CLTCL1P53675 1640 aa9.46□□□□□ -0.89
NCKAP1-207ENST00000493359 ZNF326Q5BKZ1 582 aaKnown RBP9.46□□□□□ -0.9
NCKAP1-207ENST00000493359 PTCD2Q8WV60 388 aaKnown RBP9.46□□□□□ -0.9
NCKAP1-207ENST00000493359 PCMTD1Q96MG8 357 aaPredicted RBP9.46□□□□□ -0.9
NCKAP1-207ENST00000493359 RIMBP2O15034 1052 aa9.45□□□□□ -0.9
NCKAP1-207ENST00000493359 MAP3K7O43318 606 aa9.45□□□□□ -0.9
NCKAP1-207ENST00000493359 ARID3AQ99856 593 aa9.45□□□□□ -0.9
NCKAP1-207ENST00000493359 UHRF1BP1Q6BDS2 1440 aa9.45□□□□□ -0.9
NCKAP1-207ENST00000493359 CNTLNQ9NXG0 1405 aa9.45□□□□□ -0.9
NCKAP1-207ENST00000493359 COL17A1Q9UMD9 1497 aaPredicted RBP9.45□□□□□ -0.9
NCKAP1-207ENST00000493359 MS4A1P11836 297 aa9.44□□□□□ -0.9
NCKAP1-207ENST00000493359 DCAF11Q8TEB1 546 aa9.44□□□□□ -0.9
NCKAP1-207ENST00000493359 KHSRPQ92945 711 aaKnown RBP eCLIP9.44□□□□□ -0.95e-14■□□□□ 8.1
NCKAP1-207ENST00000493359 EPAS1Q99814 870 aa9.44□□□□□ -0.9
NCKAP1-207ENST00000493359 NPATQ14207 1427 aa9.44□□□□□ -0.9
NCKAP1-207ENST00000493359 RALGAPBQ86X10 1494 aa9.44□□□□□ -0.9
NCKAP1-207ENST00000493359 NEURL4Q96JN8 1562 aa9.44□□□□□ -0.9
NCKAP1-207ENST00000493359 ARHGAP31Q2M1Z3 1444 aa9.43□□□□□ -0.9
NCKAP1-207ENST00000493359 CLCN1P35523 988 aa9.43□□□□□ -0.9
NCKAP1-207ENST00000493359 EMP3P54852 163 aa9.43□□□□□ -0.9
NCKAP1-207ENST00000493359 EIF4G2P78344 907 aaKnown RBP eCLIP9.43□□□□□ -0.9
NCKAP1-207ENST00000493359 RGL3Q3MIN7 710 aa9.43□□□□□ -0.9
NCKAP1-207ENST00000493359 ARSIQ5FYB1 569 aa9.43□□□□□ -0.9
NCKAP1-207ENST00000493359 RBM33Q96EV2 1170 aaKnown RBP9.43□□□□□ -0.9
NCKAP1-207ENST00000493359 ANO8Q9HCE9 1232 aaPredicted RBP9.43□□□□□ -0.9
NCKAP1-207ENST00000493359 PHF14O94880 888 aa9.42□□□□□ -0.9
NCKAP1-207ENST00000493359 HOXB1P14653 301 aaPredicted RBP9.42□□□□□ -0.9
NCKAP1-207ENST00000493359 EN1Q05925 392 aaPredicted RBP9.42□□□□□ -0.9
NCKAP1-207ENST00000493359 NBPF8Q3BBV2 869 aa9.42□□□□□ -0.9
NCKAP1-207ENST00000493359 ESF1Q9H501 851 aaKnown RBP9.42□□□□□ -0.9
NCKAP1-207ENST00000493359 CDHR5Q9HBB8 845 aa9.42□□□□□ -0.9
NCKAP1-207ENST00000493359 UGGT1Q9NYU2 1555 aa9.41□□□□□ -0.9
NCKAP1-207ENST00000493359 SPATA31E1Q6ZUB1 1445 aa9.41□□□□□ -0.9
NCKAP1-207ENST00000493359 KIF1BO60333 1816 aa9.41□□□□□ -0.9
NCKAP1-207ENST00000493359 GPR153Q6NV75 609 aa9.41□□□□□ -0.9
NCKAP1-207ENST00000493359 CLTCQ00610 1675 aaKnown RBP9.41□□□□□ -0.9
NCKAP1-207ENST00000493359 ADGRB3O60242 1522 aa9.41□□□□□ -0.9
NCKAP1-207ENST00000493359 PRAG1Q86YV5 1406 aa9.4□□□□□ -0.9
NCKAP1-207ENST00000493359 ARID4BQ4LE39 1312 aaPredicted RBP9.4□□□□□ -0.9
NCKAP1-207ENST00000493359 SLC34A2O95436 690 aa9.4□□□□□ -0.9
NCKAP1-207ENST00000493359 HSPA5P11021 654 aaKnown RBP9.4□□□□□ -0.9
NCKAP1-207ENST00000493359 MDM2Q00987 491 aaPredicted RBP9.4□□□□□ -0.9
NCKAP1-207ENST00000493359 STAC3Q96MF2 364 aa9.4□□□□□ -0.9
NCKAP1-207ENST00000493359 REPIN1Q9BWE0 567 aaKnown RBP9.4□□□□□ -0.9
NCKAP1-207ENST00000493359 ZSWIM6Q9HCJ5 1215 aa9.4□□□□□ -0.9
NCKAP1-207ENST00000493359 GPCPD1Q9NPB8 672 aa9.4□□□□□ -0.9
NCKAP1-207ENST00000493359 TRPM1Q7Z4N2 1603 aa9.4□□□□□ -0.9
NCKAP1-207ENST00000493359 NOS1P29475 1434 aa9.39□□□□□ -0.91
NCKAP1-207ENST00000493359 ROCK2O75116 1388 aaKnown RBP9.39□□□□□ -0.91
NCKAP1-207ENST00000493359 MROH2AA6NES4 1674 aa9.39□□□□□ -0.91
NCKAP1-207ENST00000493359 PREX1Q8TCU6 1659 aa9.39□□□□□ -0.91
NCKAP1-207ENST00000493359 APBB1O00213 710 aa9.39□□□□□ -0.91
NCKAP1-207ENST00000493359 MLECQ14165 292 aa9.39□□□□□ -0.91
NCKAP1-207ENST00000493359 PCDHGA4Q9Y5G9 962 aa9.39□□□□□ -0.91
NCKAP1-207ENST00000493359 SIGLEC1Q9BZZ2 1709 aa9.39□□□□□ -0.91
NCKAP1-207ENST00000493359 MADDQ8WXG6 1647 aa9.38□□□□□ -0.91
NCKAP1-207ENST00000493359 USP47Q96K76 1375 aa9.38□□□□□ -0.91
NCKAP1-207ENST00000493359 SYNMO15061 1565 aa9.38□□□□□ -0.91
NCKAP1-207ENST00000493359 FAM205CA6NFA0 338 aa9.38□□□□□ -0.91
NCKAP1-207ENST00000493359 HIRIP3Q9BW71 556 aaPredicted RBP9.38□□□□□ -0.91
NCKAP1-207ENST00000493359 CARD11Q9BXL7 1154 aa9.38□□□□□ -0.91
NCKAP1-207ENST00000493359 NPDC1Q9NQX5 325 aaPredicted RBP9.38□□□□□ -0.91
NCKAP1-207ENST00000493359 MYOM2P54296 1465 aa9.38□□□□□ -0.91
NCKAP1-207ENST00000493359 PIK3C2BO00750 1634 aa9.38□□□□□ -0.91
NCKAP1-207ENST00000493359 LAMC1P11047 1609 aa9.38□□□□□ -0.91
NCKAP1-207ENST00000493359 ERVK-7P63135 1459 aa9.37□□□□□ -0.91
NCKAP1-207ENST00000493359 NUDT7P0C024 238 aa9.37□□□□□ -0.91
NCKAP1-207ENST00000493359 SSTR3P32745 418 aaPredicted RBP9.37□□□□□ -0.91
NCKAP1-207ENST00000493359 SH3D19Q5HYK7 790 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms