RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 WASLO00401 505 aaPredicted RBP20.21■□□□□ 0.83
SAMM50-204ENST00000493161 DCAF11Q8TEB1 546 aa20.21■□□□□ 0.83
SAMM50-204ENST00000493161 COL14A1Q05707 1796 aaKnown RBP20.21■□□□□ 0.83
SAMM50-204ENST00000493161 CRYBG1Q9Y4K1 1723 aa20.2■□□□□ 0.82
SAMM50-204ENST00000493161 PAK3O75914 559 aaPredicted RBP20.18■□□□□ 0.82
SAMM50-204ENST00000493161 NGDNQ8NEJ9 315 aaKnown RBP20.18■□□□□ 0.82
SAMM50-204ENST00000493161 SPATA31A5Q5VU36 1347 aa20.18■□□□□ 0.82
SAMM50-204ENST00000493161 SPATA31A7Q8IWB4 1347 aa20.18■□□□□ 0.82
SAMM50-204ENST00000493161 BAG6P46379 1132 aa20.17■□□□□ 0.82
SAMM50-204ENST00000493161 EN1Q05925 392 aaPredicted RBP20.17■□□□□ 0.82
SAMM50-204ENST00000493161 EIF3AQ14152 1382 aaKnown RBP20.16■□□□□ 0.82
SAMM50-204ENST00000493161 LRP5O75197 1615 aa20.16■□□□□ 0.82
SAMM50-204ENST00000493161 PRDM11Q9NQV5 511 aa20.15■□□□□ 0.82
SAMM50-204ENST00000493161 THSD7AQ9UPZ6 1657 aa20.14■□□□□ 0.81
SAMM50-204ENST00000493161 HRCP23327 699 aa20.14■□□□□ 0.81
SAMM50-204ENST00000493161 CHRNA2Q15822 529 aa20.14■□□□□ 0.81
SAMM50-204ENST00000493161 ATP7BP35670 1465 aa20.13■□□□□ 0.81
SAMM50-204ENST00000493161 NUDT16Q96DE0 195 aaKnown RBP20.13■□□□□ 0.81
SAMM50-204ENST00000493161 ARHGEF28Q8N1W1 1705 aaKnown RBP20.13■□□□□ 0.81
SAMM50-204ENST00000493161 KIAA0232Q92628 1395 aa20.12■□□□□ 0.81
SAMM50-204ENST00000493161 NUTM2GQ5VZR2 741 aa20.12■□□□□ 0.81
SAMM50-204ENST00000493161 RGPD1P0DJD0 1748 aa20.11■□□□□ 0.81
SAMM50-204ENST00000493161 SPATA31A1Q5TZJ5 1347 aa20.1■□□□□ 0.81
SAMM50-204ENST00000493161 ZC3H6P61129 1189 aaKnown RBP20.1■□□□□ 0.81
SAMM50-204ENST00000493161 R3HDM1Q15032 1099 aaKnown RBP20.09■□□□□ 0.81
SAMM50-204ENST00000493161 STRN4Q9NRL3 753 aa20.09■□□□□ 0.81
SAMM50-204ENST00000493161 TNS1Q9HBL0 1735 aaKnown RBP20.09■□□□□ 0.81
SAMM50-204ENST00000493161 PHRF1Q9P1Y6 1649 aaKnown RBP20.09■□□□□ 0.81
SAMM50-204ENST00000493161 EZH2Q15910 746 aaKnown RBP20.08■□□□□ 0.81
SAMM50-204ENST00000493161 CDK19Q9BWU1 502 aa20.08■□□□□ 0.81
SAMM50-204ENST00000493161 ITSN1Q15811 1721 aa20.07■□□□□ 0.8
SAMM50-204ENST00000493161 DISP2A7MBM2 1401 aa20.06■□□□□ 0.8
SAMM50-204ENST00000493161 TRIM37O94972 964 aa20.06■□□□□ 0.8
SAMM50-204ENST00000493161 STAC3Q96MF2 364 aa20.06■□□□□ 0.8
SAMM50-204ENST00000493161 ACEP12821 1306 aa20.05■□□□□ 0.8
SAMM50-204ENST00000493161 USP35Q9P2H5 1018 aa20.05■□□□□ 0.8
SAMM50-204ENST00000493161 NBPF8Q3BBV2 869 aa20.04■□□□□ 0.8
SAMM50-204ENST00000493161 CAMKK2Q96RR4 588 aa20.04■□□□□ 0.8
SAMM50-204ENST00000493161 POLR3AO14802 1390 aaPredicted RBP20.04■□□□□ 0.8
SAMM50-204ENST00000493161 TOPAZ1Q8N9V7 1692 aa20.03■□□□□ 0.8
SAMM50-204ENST00000493161 FAM196AQ6ZSG2 479 aa20.02■□□□□ 0.8
SAMM50-204ENST00000493161 CAMTA1Q9Y6Y1 1673 aa20.01■□□□□ 0.79
SAMM50-204ENST00000493161 LARP1Q6PKG0 1096 aaKnown RBP20.01■□□□□ 0.79
SAMM50-204ENST00000493161 CCDC61Q9Y6R9 512 aa20.01■□□□□ 0.79
SAMM50-204ENST00000493161 SSH2Q76I76 1423 aa20.01■□□□□ 0.79
SAMM50-204ENST00000493161 NRKQ7Z2Y5 1582 aa20■□□□□ 0.79
SAMM50-204ENST00000493161 PLEKHG3A1L390 1219 aa20■□□□□ 0.79
SAMM50-204ENST00000493161 APBA3O96018 575 aa20■□□□□ 0.79
SAMM50-204ENST00000493161 EVA1CP58658 441 aa20■□□□□ 0.79
SAMM50-204ENST00000493161 NBPF1Q3BBV0 1214 aa20■□□□□ 0.79
SAMM50-204ENST00000493161 ABTB2Q8N961 1025 aa19.99■□□□□ 0.79
SAMM50-204ENST00000493161 BARGINQ6ZT62 677 aa19.98■□□□□ 0.79
SAMM50-204ENST00000493161 LMO7Q8WWI1 1683 aa19.97■□□□□ 0.79
SAMM50-204ENST00000493161 USP19O94966 1318 aa19.97■□□□□ 0.79
SAMM50-204ENST00000493161 PDE3BQ13370 1112 aa19.96■□□□□ 0.79
SAMM50-204ENST00000493161 TCP11L2Q8N4U5 519 aa19.95■□□□□ 0.78
SAMM50-204ENST00000493161 CPDO75976 1380 aa19.95■□□□□ 0.78
SAMM50-204ENST00000493161 KIAA1210Q9ULL0 1709 aa19.94■□□□□ 0.78
SAMM50-204ENST00000493161 CABP2Q9NPB3 220 aa19.94■□□□□ 0.78
SAMM50-204ENST00000493161 PPIP5K1Q6PFW1 1433 aa19.93■□□□□ 0.78
SAMM50-204ENST00000493161 GCP02774 474 aa19.93■□□□□ 0.78
SAMM50-204ENST00000493161 SRPK2P78362 688 aaKnown RBP19.93■□□□□ 0.78
SAMM50-204ENST00000493161 RREB1Q92766 1687 aa19.93■□□□□ 0.78
SAMM50-204ENST00000493161 NUP188Q5SRE5 1749 aa19.91■□□□□ 0.78
SAMM50-204ENST00000493161 NLRP13Q86W25 1043 aa19.91■□□□□ 0.78
SAMM50-204ENST00000493161 PARD3Q8TEW0 1356 aa19.91■□□□□ 0.78
SAMM50-204ENST00000493161 COL5A2P05997 1499 aaPredicted RBP19.9■□□□□ 0.78
SAMM50-204ENST00000493161 ZBTB7CA1YPR0 619 aa19.89■□□□□ 0.77
SAMM50-204ENST00000493161 CENPJQ9HC77 1338 aaPredicted RBP19.89■□□□□ 0.77
SAMM50-204ENST00000493161 CABP1Q9NZU7 370 aa19.88■□□□□ 0.77
SAMM50-204ENST00000493161 THRAP3Q9Y2W1 955 aaKnown RBP19.88■□□□□ 0.77
SAMM50-204ENST00000493161 PARP4Q9UKK3 1724 aaKnown RBP19.87■□□□□ 0.77
SAMM50-204ENST00000493161 CRB1P82279 1406 aa19.85■□□□□ 0.77
SAMM50-204ENST00000493161 QRICH2Q9H0J4 1663 aa19.85■□□□□ 0.77
SAMM50-204ENST00000493161 NLRP6P59044 892 aa19.85■□□□□ 0.77
SAMM50-204ENST00000493161 NBPF14Q5TI25 921 aa19.85■□□□□ 0.77
SAMM50-204ENST00000493161 USP6P35125 1406 aa19.85■□□□□ 0.77
SAMM50-204ENST00000493161 PTF1AQ7RTS3 328 aa19.84■□□□□ 0.77
SAMM50-204ENST00000493161 PEAK1Q9H792 1746 aa19.84■□□□□ 0.77
SAMM50-204ENST00000493161 SLIT3O75094 1523 aa19.83■□□□□ 0.77
SAMM50-204ENST00000493161 AXIN2Q9Y2T1 843 aa19.83■□□□□ 0.77
SAMM50-204ENST00000493161 AATKQ6ZMQ8 1374 aa19.83■□□□□ 0.76
SAMM50-204ENST00000493161 LRRC37A3O60309 1634 aa19.82■□□□□ 0.76
SAMM50-204ENST00000493161 BRD4O60885 1362 aaPredicted RBP19.82■□□□□ 0.76
SAMM50-204ENST00000493161 COL18A1P39060 1754 aa19.81■□□□□ 0.76
SAMM50-204ENST00000493161 PIK3C2AO00443 1686 aa19.81■□□□□ 0.76
SAMM50-204ENST00000493161 OVOS2A0A0G2JMS6 1433 aa19.8■□□□□ 0.76
SAMM50-204ENST00000493161 OVOS2A0A0J9YW53 1432 aa19.8■□□□□ 0.76
SAMM50-204ENST00000493161 OVOS2Q6IE36 1432 aa19.8■□□□□ 0.76
SAMM50-204ENST00000493161 TOM1L2Q6ZVM7 507 aa19.79■□□□□ 0.76
SAMM50-204ENST00000493161 L3MBTL2Q969R5 705 aa19.79■□□□□ 0.76
SAMM50-204ENST00000493161 KCNQ2O43526 872 aa19.78■□□□□ 0.76
SAMM50-204ENST00000493161 DDB1Q16531 1140 aa19.78■□□□□ 0.76
SAMM50-204ENST00000493161 ANO8Q9HCE9 1232 aaPredicted RBP19.78■□□□□ 0.76
SAMM50-204ENST00000493161 SBF2Q86WG5 1849 aa19.78■□□□□ 0.76
SAMM50-204ENST00000493161 MARCH10Q8NA82 808 aaPredicted RBP19.77■□□□□ 0.76
SAMM50-204ENST00000493161 SPON1Q9HCB6 807 aa19.77■□□□□ 0.76
SAMM50-204ENST00000493161 SOX12O15370 315 aa19.76■□□□□ 0.75
SAMM50-204ENST00000493161 PDGFDQ9GZP0 370 aaPredicted RBP19.76■□□□□ 0.75
SAMM50-204ENST00000493161 WDR17Q8IZU2 1322 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms