RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 TMPOP42166 694 aaKnown RBP16.07■□□□□ 0.16
HMGN1-220ENST00000492280 COL3A1P02461 1466 aaPredicted RBP16.06■□□□□ 0.16
HMGN1-220ENST00000492280 NME9Q86XW9 330 aa16.06■□□□□ 0.16
HMGN1-220ENST00000492280 PLEKHF1Q96S99 279 aa16.06■□□□□ 0.16
HMGN1-220ENST00000492280 THUMPD2Q9BTF0 503 aaKnown RBP16.06■□□□□ 0.16
HMGN1-220ENST00000492280 TRIM35Q9UPQ4 493 aa16.06■□□□□ 0.16
HMGN1-220ENST00000492280 PCDHB15Q9Y5E8 787 aa16.06■□□□□ 0.16
HMGN1-220ENST00000492280 EMILIN1Q9Y6C2 1016 aa16.06■□□□□ 0.16
HMGN1-220ENST00000492280 WDR63Q8IWG1 891 aa16.05■□□□□ 0.16
HMGN1-220ENST00000492280 RIPK4P57078 832 aa16.04■□□□□ 0.16
HMGN1-220ENST00000492280 PUS7Q96PZ0 661 aaKnown RBP16.04■□□□□ 0.16
HMGN1-220ENST00000492280 DIAPH1O60610 1272 aaKnown RBP16.04■□□□□ 0.16
HMGN1-220ENST00000492280 PDE3AQ14432 1141 aa16.04■□□□□ 0.16
HMGN1-220ENST00000492280 FAM161AQ3B820 660 aa16.03■□□□□ 0.16
HMGN1-220ENST00000492280 ADGRB2O60241 1585 aa16.03■□□□□ 0.16
HMGN1-220ENST00000492280 RRS1Q15050 365 aaKnown RBP16.03■□□□□ 0.16
HMGN1-220ENST00000492280 NGEFQ8N5V2 710 aa16.03■□□□□ 0.16
HMGN1-220ENST00000492280 SMC4Q9NTJ3 1288 aa16.03■□□□□ 0.16
HMGN1-220ENST00000492280 PRKAR2BP31323 418 aa16.03■□□□□ 0.16
HMGN1-220ENST00000492280 MYH16Q9H6N6 1097 aa16.03■□□□□ 0.16
HMGN1-220ENST00000492280 CEBPAP49715 358 aaPredicted RBP16.02■□□□□ 0.16
HMGN1-220ENST00000492280 POLKQ9UBT6 870 aa16.02■□□□□ 0.16
HMGN1-220ENST00000492280 KIF20BQ96Q89 1820 aa16.02■□□□□ 0.16
HMGN1-220ENST00000492280 DEKP35659 375 aaKnown RBP16.02■□□□□ 0.15
HMGN1-220ENST00000492280 SETD1AO15047 1707 aaKnown RBP16.02■□□□□ 0.15
HMGN1-220ENST00000492280 SOX12O15370 315 aa16.01■□□□□ 0.15
HMGN1-220ENST00000492280 PHACTR3Q96KR7 559 aa16.01■□□□□ 0.15
HMGN1-220ENST00000492280 SPATA31D1Q6ZQQ2 1576 aa16.01■□□□□ 0.15
HMGN1-220ENST00000492280 NINLQ9Y2I6 1382 aa16.01■□□□□ 0.15
HMGN1-220ENST00000492280 ANKRD26Q9UPS8 1709 aa16.01■□□□□ 0.15
HMGN1-220ENST00000492280 SEC24BO95487 1268 aa16.01■□□□□ 0.15
HMGN1-220ENST00000492280 CCDC27Q2M243 656 aa16.01■□□□□ 0.15
HMGN1-220ENST00000492280 SSH1Q8WYL5 1049 aa16.01■□□□□ 0.15
HMGN1-220ENST00000492280 NRXN3Q9Y4C0 1643 aa16.01■□□□□ 0.15
HMGN1-220ENST00000492280 ZMYM3Q14202 1370 aa16.01■□□□□ 0.15
HMGN1-220ENST00000492280 MAP2P11137 1827 aaKnown RBP16■□□□□ 0.15
HMGN1-220ENST00000492280 LRRC7Q96NW7 1537 aa16■□□□□ 0.15
HMGN1-220ENST00000492280 FTSJ3Q8IY81 847 aaKnown RBP16■□□□□ 0.15
HMGN1-220ENST00000492280 PPIP5K1Q6PFW1 1433 aa16■□□□□ 0.15
HMGN1-220ENST00000492280 KIF13AQ9H1H9 1805 aa16■□□□□ 0.15
HMGN1-220ENST00000492280 ELL2O00472 640 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-220ENST00000492280 WASLO00401 505 aaPredicted RBP15.98■□□□□ 0.15
HMGN1-220ENST00000492280 TRIM27P14373 513 aa15.98■□□□□ 0.15
HMGN1-220ENST00000492280 AGLP35573 1532 aa15.98■□□□□ 0.15
HMGN1-220ENST00000492280 ITPRIPQ8IWB1 547 aa15.97■□□□□ 0.15
HMGN1-220ENST00000492280 RTL5Q5HYW3 569 aaPredicted RBP15.97■□□□□ 0.15
HMGN1-220ENST00000492280 NUDT16Q96DE0 195 aaKnown RBP15.97■□□□□ 0.15
HMGN1-220ENST00000492280 ZKSCAN2Q63HK3 967 aa15.96■□□□□ 0.15
HMGN1-220ENST00000492280 NEFMP07197 916 aa15.96■□□□□ 0.15
HMGN1-220ENST00000492280 SLC26A8Q96RN1 970 aa15.96■□□□□ 0.15
HMGN1-220ENST00000492280 NOB1Q9ULX3 412 aaKnown RBP15.96■□□□□ 0.15
HMGN1-220ENST00000492280 PPP6R1Q9UPN7 881 aa15.96■□□□□ 0.15
HMGN1-220ENST00000492280 CPS1P31327 1500 aa15.96■□□□□ 0.14
HMGN1-220ENST00000492280 PRR36Q9H6K5 1346 aa15.96■□□□□ 0.14
HMGN1-220ENST00000492280 MVPQ14764 893 aaKnown RBP15.96■□□□□ 0.14
HMGN1-220ENST00000492280 DZIP1LQ8IYY4 767 aaKnown RBP15.96■□□□□ 0.14
HMGN1-220ENST00000492280 RSPH6AQ9H0K4 717 aa15.96■□□□□ 0.14
HMGN1-220ENST00000492280 PDZRN3Q9UPQ7 1066 aa15.96■□□□□ 0.14
HMGN1-220ENST00000492280 FAM83GA6ND36 823 aa15.95■□□□□ 0.14
HMGN1-220ENST00000492280 DCTN1Q14203 1278 aa15.95■□□□□ 0.14
HMGN1-220ENST00000492280 REREQ9P2R6 1566 aa15.94■□□□□ 0.14
HMGN1-220ENST00000492280 BCL11AQ9H165 835 aa15.93■□□□□ 0.14
HMGN1-220ENST00000492280 PNPLA6Q8IY17 1366 aa15.93■□□□□ 0.14
HMGN1-220ENST00000492280 ROBO2Q9HCK4 1378 aa15.93■□□□□ 0.14
HMGN1-220ENST00000492280 LTKP29376 864 aa15.93■□□□□ 0.14
HMGN1-220ENST00000492280 TMEM57Q8N5G2 664 aa15.93■□□□□ 0.14
HMGN1-220ENST00000492280 MED14O60244 1454 aa15.92■□□□□ 0.14
HMGN1-220ENST00000492280 TNRQ92752 1358 aa15.92■□□□□ 0.14
HMGN1-220ENST00000492280 TSPYL6Q8N831 410 aa15.92■□□□□ 0.14
HMGN1-220ENST00000492280 AEBP1Q8IUX7 1158 aa15.91■□□□□ 0.14
HMGN1-220ENST00000492280 ATP7BP35670 1465 aa15.91■□□□□ 0.14
HMGN1-220ENST00000492280 DLC1Q96QB1 1528 aa15.91■□□□□ 0.14
HMGN1-220ENST00000492280 USP19O94966 1318 aa15.91■□□□□ 0.14
HMGN1-220ENST00000492280 FAM135BQ49AJ0 1406 aa15.9■□□□□ 0.14
HMGN1-220ENST00000492280 C1orf115Q9H7X2 142 aa15.9■□□□□ 0.14
HMGN1-220ENST00000492280 ATF7IPQ6VMQ6 1270 aa15.9■□□□□ 0.14
HMGN1-220ENST00000492280 COG3Q96JB2 828 aa15.9■□□□□ 0.14
HMGN1-220ENST00000492280 PMFBP1Q8TBY8 1022 aa15.89■□□□□ 0.13
HMGN1-220ENST00000492280 CCDC61Q9Y6R9 512 aa15.89■□□□□ 0.13
HMGN1-220ENST00000492280 CPSF1Q10570 1443 aaKnown RBP15.89■□□□□ 0.13
HMGN1-220ENST00000492280 FCHSD2O94868 740 aa15.89■□□□□ 0.13
HMGN1-220ENST00000492280 IL13P35225 146 aa15.89■□□□□ 0.13
HMGN1-220ENST00000492280 DDRGK1Q96HY6 314 aa15.89■□□□□ 0.13
HMGN1-220ENST00000492280 DAXXQ9UER7 740 aaPredicted RBP15.89■□□□□ 0.13
HMGN1-220ENST00000492280 EDC4Q6P2E9 1401 aaKnown RBP15.88■□□□□ 0.13
HMGN1-220ENST00000492280 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.88■□□□□ 0.13
HMGN1-220ENST00000492280 VIRMAQ69YN4 1812 aaKnown RBP15.87■□□□□ 0.13
HMGN1-220ENST00000492280 TMEM2Q9UHN6 1383 aa15.87■□□□□ 0.13
HMGN1-220ENST00000492280 NFE2L2Q16236 605 aa15.87■□□□□ 0.13
HMGN1-220ENST00000492280 KRT24Q2M2I5 525 aa15.87■□□□□ 0.13
HMGN1-220ENST00000492280 RWDD1Q9H446 243 aaPredicted RBP15.86■□□□□ 0.13
HMGN1-220ENST00000492280 DLG5Q8TDM6 1919 aa15.86■□□□□ 0.13
HMGN1-220ENST00000492280 MBIPQ9NS73 344 aa15.86■□□□□ 0.13
HMGN1-220ENST00000492280 UBR1Q8IWV7 1749 aa15.86■□□□□ 0.13
HMGN1-220ENST00000492280 CDC42BPGQ6DT37 1551 aa15.85■□□□□ 0.13
HMGN1-220ENST00000492280 ADAMTS13Q76LX8 1427 aa15.85■□□□□ 0.13
HMGN1-220ENST00000492280 ACEP12821 1306 aa15.84■□□□□ 0.13
HMGN1-220ENST00000492280 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.84■□□□□ 0.13
HMGN1-220ENST00000492280 HDGFP51858 240 aaKnown RBP15.83■□□□□ 0.13
HMGN1-220ENST00000492280 TRHP20396 242 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms