RNA–Protein interactions for RNA: ENST00000491831.5

AFF4-209, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 1 (best)

Gene AFF4, Length 1,667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-209ENST00000491831 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.45■■□□□ 1.34
AFF4-209ENST00000491831 FBXO41Q8TF61 875 aa23.45■■□□□ 1.34
AFF4-209ENST00000491831 TERF2IPQ9NYB0 399 aa23.45■■□□□ 1.34
AFF4-209ENST00000491831 NSD3Q9BZ95 1437 aa23.45■■□□□ 1.34
AFF4-209ENST00000491831 PAK3O75914 559 aaPredicted RBP23.44■■□□□ 1.34
AFF4-209ENST00000491831 PIK3C2AO00443 1686 aa23.44■■□□□ 1.34
AFF4-209ENST00000491831 ALS2Q96Q42 1657 aa23.44■■□□□ 1.34
AFF4-209ENST00000491831 NUTM2GQ5VZR2 741 aa23.44■■□□□ 1.34
AFF4-209ENST00000491831 ZRANB1Q9UGI0 708 aa23.43■■□□□ 1.34
AFF4-209ENST00000491831 MARF1Q9Y4F3 1742 aaKnown RBP23.41■■□□□ 1.34
AFF4-209ENST00000491831 TTC21BQ7Z4L5 1316 aa23.41■■□□□ 1.34
AFF4-209ENST00000491831 LMOD2Q6P5Q4 547 aa23.41■■□□□ 1.34
AFF4-209ENST00000491831 NME9Q86XW9 330 aa23.41■■□□□ 1.34
AFF4-209ENST00000491831 EDC4Q6P2E9 1401 aaKnown RBP23.4■■□□□ 1.34
AFF4-209ENST00000491831 TNS3Q68CZ2 1445 aa23.39■■□□□ 1.34
AFF4-209ENST00000491831 KIF20BQ96Q89 1820 aa23.39■■□□□ 1.34
AFF4-209ENST00000491831 CNGB1Q14028 1251 aaPredicted RBP23.39■■□□□ 1.34
AFF4-209ENST00000491831 ZNF692Q9BU19 519 aaPredicted RBP23.39■■□□□ 1.34
AFF4-209ENST00000491831 SPATA31A3Q5VYP0 1347 aa23.39■■□□□ 1.33
AFF4-209ENST00000491831 SBNO1A3KN83 1393 aa23.37■■□□□ 1.33
AFF4-209ENST00000491831 PER1O15534 1290 aaPredicted RBP23.35■■□□□ 1.33
AFF4-209ENST00000491831 CABLES1Q8TDN4 633 aa23.35■■□□□ 1.33
AFF4-209ENST00000491831 ABTB2Q8N961 1025 aa23.34■■□□□ 1.33
AFF4-209ENST00000491831 GGNBP2Q9H3C7 697 aa23.34■■□□□ 1.33
AFF4-209ENST00000491831 ABCA3Q99758 1704 aa23.34■■□□□ 1.33
AFF4-209ENST00000491831 CRYBG1Q9Y4K1 1723 aa23.34■■□□□ 1.33
AFF4-209ENST00000491831 MED1Q15648 1581 aaPredicted RBP23.34■■□□□ 1.33
AFF4-209ENST00000491831 PNPLA6Q8IY17 1366 aa23.33■■□□□ 1.33
AFF4-209ENST00000491831 SHPRHQ149N8 1683 aa23.32■■□□□ 1.32
AFF4-209ENST00000491831 FYB1O15117 783 aa23.32■■□□□ 1.32
AFF4-209ENST00000491831 LRRC59Q96AG4 307 aaKnown RBP23.32■■□□□ 1.32
AFF4-209ENST00000491831 AMER1Q5JTC6 1135 aaPredicted RBP23.3■■□□□ 1.32
AFF4-209ENST00000491831 ILDR1Q86SU0 546 aaPredicted RBP23.3■■□□□ 1.32
AFF4-209ENST00000491831 TTC21AQ8NDW8 1320 aa23.3■■□□□ 1.32
AFF4-209ENST00000491831 COL22A1Q8NFW1 1626 aaPredicted RBP23.3■■□□□ 1.32
AFF4-209ENST00000491831 PHRF1Q9P1Y6 1649 aaKnown RBP23.3■■□□□ 1.32
AFF4-209ENST00000491831 SOX12O15370 315 aa23.29■■□□□ 1.32
AFF4-209ENST00000491831 NLRP6P59044 892 aa23.29■■□□□ 1.32
AFF4-209ENST00000491831 KNSTRNQ9Y448 316 aa23.29■■□□□ 1.32
AFF4-209ENST00000491831 ANKRD26Q9UPS8 1709 aa23.29■■□□□ 1.32
AFF4-209ENST00000491831 OVOS2A0A0J9YW53 1432 aa23.29■■□□□ 1.32
AFF4-209ENST00000491831 OVOS2Q6IE36 1432 aa23.29■■□□□ 1.32
AFF4-209ENST00000491831 CC2D1BQ5T0F9 858 aaKnown RBP23.28■■□□□ 1.32
AFF4-209ENST00000491831 FBLN1P23142 703 aa23.28■■□□□ 1.32
AFF4-209ENST00000491831 USP54Q70EL1 1684 aa23.28■■□□□ 1.32
AFF4-209ENST00000491831 ARHGEF10O15013 1369 aa23.27■■□□□ 1.32
AFF4-209ENST00000491831 BRD4O60885 1362 aaPredicted RBP23.27■■□□□ 1.32
AFF4-209ENST00000491831 CGNL1Q0VF96 1302 aa23.27■■□□□ 1.32
AFF4-209ENST00000491831 JCADQ9P266 1359 aa23.26■■□□□ 1.31
AFF4-209ENST00000491831 NUTM2BA6NNL0 878 aaPredicted RBP23.24■■□□□ 1.31
AFF4-209ENST00000491831 NUTM2EB1AL46 878 aaPredicted RBP23.24■■□□□ 1.31
AFF4-209ENST00000491831 NUTM2AQ8IVF1 878 aaPredicted RBP23.24■■□□□ 1.31
AFF4-209ENST00000491831 LRP6O75581 1613 aa23.24■■□□□ 1.31
AFF4-209ENST00000491831 USP31Q70CQ4 1352 aa23.24■■□□□ 1.31
AFF4-209ENST00000491831 USP19O94966 1318 aa23.23■■□□□ 1.31
AFF4-209ENST00000491831 SLIT3O75094 1523 aa23.23■■□□□ 1.31
AFF4-209ENST00000491831 TNNT2P45379 298 aaPredicted RBP23.22■■□□□ 1.31
AFF4-209ENST00000491831 NFAT5O94916 1531 aa23.21■■□□□ 1.31
AFF4-209ENST00000491831 NLRP13Q86W25 1043 aa23.21■■□□□ 1.31
AFF4-209ENST00000491831 COG3Q96JB2 828 aa23.21■■□□□ 1.31
AFF4-209ENST00000491831 LTN1O94822 1766 aa23.18■■□□□ 1.3
AFF4-209ENST00000491831 ADAMTS2O95450 1211 aa23.18■■□□□ 1.3
AFF4-209ENST00000491831 GCP02774 474 aa23.17■■□□□ 1.3
AFF4-209ENST00000491831 ZC3H6P61129 1189 aaKnown RBP23.17■■□□□ 1.3
AFF4-209ENST00000491831 ZBTB7CA1YPR0 619 aa23.16■■□□□ 1.3
AFF4-209ENST00000491831 HAP1P54257 671 aaPredicted RBP23.16■■□□□ 1.3
AFF4-209ENST00000491831 MAP2P11137 1827 aaKnown RBP23.16■■□□□ 1.3
AFF4-209ENST00000491831 NSD2O96028 1365 aa23.16■■□□□ 1.3
AFF4-209ENST00000491831 MORC1Q86VD1 984 aa23.16■■□□□ 1.3
AFF4-209ENST00000491831 RRS1Q15050 365 aaKnown RBP23.15■■□□□ 1.3
AFF4-209ENST00000491831 NPC1L1Q9UHC9 1359 aa23.14■■□□□ 1.3
AFF4-209ENST00000491831 PEAK1Q9H792 1746 aa23.14■■□□□ 1.29
AFF4-209ENST00000491831 KIAA0232Q92628 1395 aa23.14■■□□□ 1.29
AFF4-209ENST00000491831 CHRNA2Q15822 529 aa23.13■■□□□ 1.29
AFF4-209ENST00000491831 RGPD5Q99666 1765 aa23.13■■□□□ 1.29
AFF4-209ENST00000491831 SPATA31A6Q5VVP1 1343 aa23.12■■□□□ 1.29
AFF4-209ENST00000491831 EMILIN1Q9Y6C2 1016 aa23.11■■□□□ 1.29
AFF4-209ENST00000491831 DIEXFQ68CQ4 756 aaKnown RBP23.1■■□□□ 1.29
AFF4-209ENST00000491831 MAP3K19Q56UN5 1328 aa23.1■■□□□ 1.29
AFF4-209ENST00000491831 PARD3Q8TEW0 1356 aa23.1■■□□□ 1.29
AFF4-209ENST00000491831 COL18A1P39060 1754 aa23.1■■□□□ 1.29
AFF4-209ENST00000491831 PLCH1Q4KWH8 1693 aa23.08■■□□□ 1.29
AFF4-209ENST00000491831 FAM83GA6ND36 823 aa23.08■■□□□ 1.29
AFF4-209ENST00000491831 KCNH5Q8NCM2 988 aa23.08■■□□□ 1.29
AFF4-209ENST00000491831 ARHGEF25Q86VW2 580 aa23.06■■□□□ 1.28
AFF4-209ENST00000491831 C8orf37Q96NL8 207 aa23.06■■□□□ 1.28
AFF4-209ENST00000491831 PRDM11Q9NQV5 511 aa23.06■■□□□ 1.28
AFF4-209ENST00000491831 LMO7Q8WWI1 1683 aa23.06■■□□□ 1.28
AFF4-209ENST00000491831 PPM1GO15355 546 aaPredicted RBP23.06■■□□□ 1.28
AFF4-209ENST00000491831 POLKQ9UBT6 870 aa23.06■■□□□ 1.28
AFF4-209ENST00000491831 CPDO75976 1380 aa23.05■■□□□ 1.28
AFF4-209ENST00000491831 PRKRIP1Q9H875 184 aaPredicted RBP23.05■■□□□ 1.28
AFF4-209ENST00000491831 AXIN2Q9Y2T1 843 aa23.05■■□□□ 1.28
AFF4-209ENST00000491831 AATKQ6ZMQ8 1374 aa23.04■■□□□ 1.28
AFF4-209ENST00000491831 CAMTA1Q9Y6Y1 1673 aa23.04■■□□□ 1.28
AFF4-209ENST00000491831 COL14A1Q05707 1796 aaKnown RBP23.04■■□□□ 1.28
AFF4-209ENST00000491831 PPP2R1AP30153 589 aa23.03■■□□□ 1.28
AFF4-209ENST00000491831 MEX3CQ5U5Q3 659 aaKnown RBP23.03■■□□□ 1.28
AFF4-209ENST00000491831 NRAPQ86VF7 1730 aa23.01■■□□□ 1.27
AFF4-209ENST00000491831 MTHFSP49914 203 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms