RNA–Protein interactions for RNA: ENST00000491729.1

LSS-210, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 2,143 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-210ENST00000491729 C19orf44Q9H6X5 657 aa17.47■□□□□ 0.39
LSS-210ENST00000491729 LRRC7Q96NW7 1537 aa17.46■□□□□ 0.39
LSS-210ENST00000491729 CDC42BPGQ6DT37 1551 aa17.46■□□□□ 0.39
LSS-210ENST00000491729 TNNT2P45379 298 aaPredicted RBP17.45■□□□□ 0.38
LSS-210ENST00000491729 NPC1L1Q9UHC9 1359 aa17.45■□□□□ 0.38
LSS-210ENST00000491729 B4GALNT3Q6L9W6 998 aa17.44■□□□□ 0.38
LSS-210ENST00000491729 HDGFL2Q7Z4V5 671 aaPredicted RBP17.44■□□□□ 0.38
LSS-210ENST00000491729 NME9Q86XW9 330 aa17.44■□□□□ 0.38
LSS-210ENST00000491729 PPP2R1AP30153 589 aa17.44■□□□□ 0.38
LSS-210ENST00000491729 CGNL1Q0VF96 1302 aa17.42■□□□□ 0.38
LSS-210ENST00000491729 ESCO1Q5FWF5 840 aa17.42■□□□□ 0.38
LSS-210ENST00000491729 DDX17Q92841 729 aaKnown RBP17.41■□□□□ 0.38
LSS-210ENST00000491729 AKAP12Q02952 1782 aa17.41■□□□□ 0.38
LSS-210ENST00000491729 SSH2Q76I76 1423 aa17.41■□□□□ 0.38
LSS-210ENST00000491729 ANKARQ7Z5J8 1434 aa17.41■□□□□ 0.38
LSS-210ENST00000491729 POLR3AO14802 1390 aaPredicted RBP17.41■□□□□ 0.38
LSS-210ENST00000491729 DMRT2Q9Y5R5 561 aa17.41■□□□□ 0.38
LSS-210ENST00000491729 PHF8Q9UPP1 1060 aa17.4■□□□□ 0.38
LSS-210ENST00000491729 MON2Q7Z3U7 1717 aa17.4■□□□□ 0.38
LSS-210ENST00000491729 XPCQ01831 940 aaPredicted RBP17.39■□□□□ 0.38
LSS-210ENST00000491729 NGDNQ8NEJ9 315 aaKnown RBP17.39■□□□□ 0.38
LSS-210ENST00000491729 USP6P35125 1406 aa17.39■□□□□ 0.38
LSS-210ENST00000491729 C1orf167Q5SNV9 1468 aa17.39■□□□□ 0.37
LSS-210ENST00000491729 TTC21BQ7Z4L5 1316 aa17.39■□□□□ 0.37
LSS-210ENST00000491729 MST1RQ04912 1400 aa17.39■□□□□ 0.37
LSS-210ENST00000491729 FOXO3O43524 673 aa17.39■□□□□ 0.37
LSS-210ENST00000491729 MORC1Q86VD1 984 aa17.39■□□□□ 0.37
LSS-210ENST00000491729 CCDC136Q96JN2 1154 aa17.39■□□□□ 0.37
LSS-210ENST00000491729 EDC4Q6P2E9 1401 aaKnown RBP17.38■□□□□ 0.37
LSS-210ENST00000491729 ZNF692Q9BU19 519 aaPredicted RBP17.38■□□□□ 0.37
LSS-210ENST00000491729 SENP3-EIF4A1A0A087X0R7 540 aa17.37■□□□□ 0.37
LSS-210ENST00000491729 ITSN1Q15811 1721 aa17.37■□□□□ 0.37
LSS-210ENST00000491729 ATF3P18847 181 aa17.36■□□□□ 0.37
LSS-210ENST00000491729 NCOA3Q9Y6Q9 1424 aa17.36■□□□□ 0.37
LSS-210ENST00000491729 RRP1P56182 461 aaKnown RBP17.36■□□□□ 0.37
LSS-210ENST00000491729 NRKQ7Z2Y5 1582 aa17.35■□□□□ 0.37
LSS-210ENST00000491729 LTBP4Q8N2S1 1624 aa17.35■□□□□ 0.37
LSS-210ENST00000491729 NUTM2GQ5VZR2 741 aa17.35■□□□□ 0.37
LSS-210ENST00000491729 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
LSS-210ENST00000491729 RCAN3Q9UKA8 241 aa17.35■□□□□ 0.37
LSS-210ENST00000491729 MSH6P52701 1360 aa17.34■□□□□ 0.37
LSS-210ENST00000491729 MTHFSP49914 203 aa17.33■□□□□ 0.36
LSS-210ENST00000491729 CADPS2Q86UW7 1296 aa17.33■□□□□ 0.36
LSS-210ENST00000491729 KIF20BQ96Q89 1820 aa17.32■□□□□ 0.36
LSS-210ENST00000491729 DCCP43146 1447 aa17.31■□□□□ 0.36
LSS-210ENST00000491729 SLAIN2Q9P270 581 aa17.31■□□□□ 0.36
LSS-210ENST00000491729 NSD2O96028 1365 aa17.31■□□□□ 0.36
LSS-210ENST00000491729 PAK3O75914 559 aaPredicted RBP17.3■□□□□ 0.36
LSS-210ENST00000491729 PSME1Q06323 249 aa17.3■□□□□ 0.36
LSS-210ENST00000491729 BRINP3Q76B58 766 aa17.3■□□□□ 0.36
LSS-210ENST00000491729 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
LSS-210ENST00000491729 ANKRD26Q9UPS8 1709 aa17.29■□□□□ 0.36
LSS-210ENST00000491729 PIK3C2AO00443 1686 aa17.29■□□□□ 0.36
LSS-210ENST00000491729 RRS1Q15050 365 aaKnown RBP17.29■□□□□ 0.36
LSS-210ENST00000491729 SOX12O15370 315 aa17.28■□□□□ 0.36
LSS-210ENST00000491729 EMILIN1Q9Y6C2 1016 aa17.28■□□□□ 0.36
LSS-210ENST00000491729 OVOS2A0A0J9YW53 1432 aa17.28■□□□□ 0.36
LSS-210ENST00000491729 OVOS2Q6IE36 1432 aa17.28■□□□□ 0.36
LSS-210ENST00000491729 ERICH6Q7L0X2 663 aa17.27■□□□□ 0.36
LSS-210ENST00000491729 PLEKHG5O94827 1062 aa17.27■□□□□ 0.35
LSS-210ENST00000491729 KRT28Q7Z3Y7 464 aa17.27■□□□□ 0.35
LSS-210ENST00000491729 MARF1Q9Y4F3 1742 aaKnown RBP17.26■□□□□ 0.35
LSS-210ENST00000491729 WDR43Q15061 677 aaKnown RBP eCLIP17.26■□□□□ 0.355e-11■□□□□ 10.1
LSS-210ENST00000491729 ABTB2Q8N961 1025 aa17.26■□□□□ 0.35
LSS-210ENST00000491729 COG3Q96JB2 828 aa17.26■□□□□ 0.35
LSS-210ENST00000491729 ADAMTS8Q9UP79 889 aa17.26■□□□□ 0.35
LSS-210ENST00000491729 NLRP6P59044 892 aa17.26■□□□□ 0.35
LSS-210ENST00000491729 MAP2P11137 1827 aaKnown RBP17.25■□□□□ 0.35
LSS-210ENST00000491729 TTC21AQ8NDW8 1320 aa17.25■□□□□ 0.35
LSS-210ENST00000491729 MSH5O43196 834 aa17.25■□□□□ 0.35
LSS-210ENST00000491729 PPM1GO15355 546 aaPredicted RBP17.24■□□□□ 0.35
LSS-210ENST00000491729 USP31Q70CQ4 1352 aa17.23■□□□□ 0.35
LSS-210ENST00000491729 TRPM3Q9HCF6 1732 aaPredicted RBP17.22■□□□□ 0.35
LSS-210ENST00000491729 SALL2Q9Y467 1007 aaPredicted RBP17.21■□□□□ 0.35
LSS-210ENST00000491729 COL3A1P02461 1466 aaPredicted RBP17.2■□□□□ 0.34
LSS-210ENST00000491729 LMOD2Q6P5Q4 547 aa17.2■□□□□ 0.34
LSS-210ENST00000491729 PXDNQ92626 1479 aa17.2■□□□□ 0.34
LSS-210ENST00000491729 PNPLA6Q8IY17 1366 aa17.2■□□□□ 0.34
LSS-210ENST00000491729 CDCA7LQ96GN5 454 aa17.2■□□□□ 0.34
LSS-210ENST00000491729 SHPRHQ149N8 1683 aa17.2■□□□□ 0.34
LSS-210ENST00000491729 AATKQ6ZMQ8 1374 aa17.19■□□□□ 0.34
LSS-210ENST00000491729 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
LSS-210ENST00000491729 MAP3K19Q56UN5 1328 aa17.19■□□□□ 0.34
LSS-210ENST00000491729 KIF1AQ12756 1690 aa17.19■□□□□ 0.34
LSS-210ENST00000491729 NGEFQ8N5V2 710 aa17.18■□□□□ 0.34
LSS-210ENST00000491729 CABLES1Q8TDN4 633 aa17.18■□□□□ 0.34
LSS-210ENST00000491729 PEAK1Q9H792 1746 aa17.18■□□□□ 0.34
LSS-210ENST00000491729 TCERG1O14776 1098 aaKnown RBP17.17■□□□□ 0.34
LSS-210ENST00000491729 HSP90AB2PQ58FF8 381 aa17.17■□□□□ 0.34
LSS-210ENST00000491729 CCDC146Q8IYE0 955 aa17.17■□□□□ 0.34
LSS-210ENST00000491729 ZNF521Q96K83 1311 aa17.17■□□□□ 0.34
LSS-210ENST00000491729 NPHP3Q7Z494 1330 aa17.16■□□□□ 0.34
LSS-210ENST00000491729 SOS2Q07890 1332 aaPredicted RBP17.16■□□□□ 0.34
LSS-210ENST00000491729 ALS2Q96Q42 1657 aa17.15■□□□□ 0.34
LSS-210ENST00000491729 ANP32AP39687 249 aaKnown RBP17.15■□□□□ 0.34
LSS-210ENST00000491729 SPATA31A3Q5VYP0 1347 aa17.15■□□□□ 0.34
LSS-210ENST00000491729 GOLGA2Q08379 1002 aa17.14■□□□□ 0.33
LSS-210ENST00000491729 GCP02774 474 aa17.14■□□□□ 0.33
LSS-210ENST00000491729 IL13P35225 146 aa17.14■□□□□ 0.33
LSS-210ENST00000491729 MED1Q15648 1581 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms