RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 SNRKQ9NRH2 765 aa8.22□□□□□ -1.09
RTN4-215ENST00000491592 SOCS7O14512 581 aa8.21□□□□□ -1.1
RTN4-215ENST00000491592 CD2BP2O95400 341 aaKnown RBP8.21□□□□□ -1.1
RTN4-215ENST00000491592 FAM160A2Q8N612 972 aaPredicted RBP8.21□□□□□ -1.1
RTN4-215ENST00000491592 UBTFP17480 764 aaKnown RBP8.2□□□□□ -1.1
RTN4-215ENST00000491592 HMX1Q9NP08 348 aaPredicted RBP8.2□□□□□ -1.1
RTN4-215ENST00000491592 APBB1O00213 710 aa8.19□□□□□ -1.1
RTN4-215ENST00000491592 PER1O15534 1290 aaPredicted RBP8.19□□□□□ -1.1
RTN4-215ENST00000491592 DXOO77932 396 aaKnown RBP8.19□□□□□ -1.1
RTN4-215ENST00000491592 FOXC1Q12948 553 aa8.19□□□□□ -1.1
RTN4-215ENST00000491592 LRRN4Q8WUT4 740 aa8.19□□□□□ -1.1
RTN4-215ENST00000491592 MMP16P51512 607 aa8.18□□□□□ -1.1
RTN4-215ENST00000491592 PTPRNQ16849 979 aa8.18□□□□□ -1.1
RTN4-215ENST00000491592 PKD2L1Q9P0L9 805 aa8.18□□□□□ -1.1
RTN4-215ENST00000491592 LYPD8Q6UX82 237 aa8.17□□□□□ -1.1
RTN4-215ENST00000491592 GJD4Q96KN9 370 aaPredicted RBP8.17□□□□□ -1.1
RTN4-215ENST00000491592 AAASQ9NRG9 546 aa8.17□□□□□ -1.1
RTN4-215ENST00000491592 POTECB2RU33 542 aa8.16□□□□□ -1.1
RTN4-215ENST00000491592 FCF1Q9Y324 198 aaKnown RBP8.16□□□□□ -1.1
RTN4-215ENST00000491592 ZBTB24O43167 697 aaPredicted RBP8.15□□□□□ -1.1
RTN4-215ENST00000491592 F12P00748 615 aaPredicted RBP8.15□□□□□ -1.1
RTN4-215ENST00000491592 CCNYL3P0C7X3 344 aa8.15□□□□□ -1.1
RTN4-215ENST00000491592 CYP4X1Q8N118 509 aa8.15□□□□□ -1.1
RTN4-215ENST00000491592 CRIPAKQ8N1N5 446 aa8.15□□□□□ -1.1
RTN4-215ENST00000491592 POM121Q96HA1 1249 aa8.15□□□□□ -1.1
RTN4-215ENST00000491592 NUDT12Q9BQG2 462 aa8.15□□□□□ -1.1
RTN4-215ENST00000491592 TRIM34Q9BYJ4 488 aa8.15□□□□□ -1.1
RTN4-215ENST00000491592 ST8SIA5O15466 376 aa8.14□□□□□ -1.11
RTN4-215ENST00000491592 CLUAP1Q96AJ1 413 aa8.14□□□□□ -1.11
RTN4-215ENST00000491592 MAP10Q9P2G4 905 aa8.14□□□□□ -1.11
RTN4-215ENST00000491592 COG6Q9Y2V7 657 aa8.14□□□□□ -1.11
RTN4-215ENST00000491592 NDUFB9Q9Y6M9 179 aa8.14□□□□□ -1.11
RTN4-215ENST00000491592 RAD21O60216 631 aa8.13□□□□□ -1.11
RTN4-215ENST00000491592 AVPP01185 164 aa8.13□□□□□ -1.11
RTN4-215ENST00000491592 CTC1Q2NKJ3 1217 aa8.13□□□□□ -1.11
RTN4-215ENST00000491592 EPS8L1Q8TE68 723 aa8.13□□□□□ -1.11
RTN4-215ENST00000491592 TOR4AQ9NXH8 423 aa8.13□□□□□ -1.11
RTN4-215ENST00000491592 TBC1D2BQ9UPU7 963 aa8.13□□□□□ -1.11
RTN4-215ENST00000491592 NR6A1Q15406 480 aa8.12□□□□□ -1.11
RTN4-215ENST00000491592 GDPD2Q9HCC8 539 aa8.12□□□□□ -1.11
RTN4-215ENST00000491592 AXIN1O15169 862 aa8.11□□□□□ -1.11
RTN4-215ENST00000491592 GPR37L1O60883 481 aa8.11□□□□□ -1.11
RTN4-215ENST00000491592 CTHP32929 405 aa8.11□□□□□ -1.11
RTN4-215ENST00000491592 PROSER2Q86WR7 435 aaPredicted RBP8.11□□□□□ -1.11
RTN4-215ENST00000491592 ZMYND15Q9H091 742 aa8.11□□□□□ -1.11
RTN4-215ENST00000491592 PRM3Q9NNZ6 103 aa8.11□□□□□ -1.11
RTN4-215ENST00000491592 A6NJR5 290 aa8.1□□□□□ -1.11
RTN4-215ENST00000491592 TREML4Q6UXN2 200 aa8.1□□□□□ -1.11
RTN4-215ENST00000491592 CCDC24Q8N4L8 307 aa8.1□□□□□ -1.11
RTN4-215ENST00000491592 TTC24A2A3L6 582 aaPredicted RBP8.09□□□□□ -1.11
RTN4-215ENST00000491592 ABL2P42684 1182 aa8.09□□□□□ -1.11
RTN4-215ENST00000491592 SMCPP49901 116 aaPredicted RBP8.09□□□□□ -1.11
RTN4-215ENST00000491592 KCNH2Q12809 1159 aa8.09□□□□□ -1.11
RTN4-215ENST00000491592 EVA1BQ9NVM1 165 aa8.09□□□□□ -1.11
RTN4-215ENST00000491592 PNMA1Q8ND90 353 aa8.08□□□□□ -1.12
RTN4-215ENST00000491592 UNC93B1Q9H1C4 597 aa8.08□□□□□ -1.12
RTN4-215ENST00000491592 C11orf95C9JLR9 678 aaPredicted RBP8.06□□□□□ -1.12
RTN4-215ENST00000491592 WNT7AO00755 349 aa8.06□□□□□ -1.12
RTN4-215ENST00000491592 FKBPLQ9UIM3 349 aa8.06□□□□□ -1.12
RTN4-215ENST00000491592 ZC3H4Q9UPT8 1303 aaKnown RBP8.05□□□□□ -1.12
RTN4-215ENST00000491592 IRF5Q13568 498 aa8.05□□□□□ -1.12
RTN4-215ENST00000491592 NBPF14Q5TI25 921 aa8.05□□□□□ -1.12
RTN4-215ENST00000491592 PTCRAQ6ISU1 281 aaPredicted RBP8.05□□□□□ -1.12
RTN4-215ENST00000491592 WWC1Q8IX03 1113 aa8.05□□□□□ -1.12
RTN4-215ENST00000491592 FNBP4Q8N3X1 1017 aaPredicted RBP8.05□□□□□ -1.12
RTN4-215ENST00000491592 SNIP1Q8TAD8 396 aaKnown RBP8.05□□□□□ -1.12
RTN4-215ENST00000491592 GMPR2Q9P2T1 348 aaKnown RBP8.05□□□□□ -1.12
RTN4-215ENST00000491592 DACH1Q9UI36 760 aa8.05□□□□□ -1.12
RTN4-215ENST00000491592 TRIM32Q13049 653 aa8.04□□□□□ -1.12
RTN4-215ENST00000491592 LCE2AQ5TA79 106 aaPredicted RBP8.04□□□□□ -1.12
RTN4-215ENST00000491592 ARMC2Q8NEN0 867 aa8.04□□□□□ -1.12
RTN4-215ENST00000491592 TRAK2O60296 914 aa8.03□□□□□ -1.12
RTN4-215ENST00000491592 GPKOWQ92917 476 aaPredicted RBP eCLIP8.03□□□□□ -1.12
RTN4-215ENST00000491592 WFS1O76024 890 aa8.02□□□□□ -1.13
RTN4-215ENST00000491592 LINC01559Q495D7 138 aa8.01□□□□□ -1.13
RTN4-215ENST00000491592 SMPD1P17405 629 aa8□□□□□ -1.13
RTN4-215ENST00000491592 VAC14Q08AM6 782 aa8□□□□□ -1.13
RTN4-215ENST00000491592 WASHC4Q2M389 1173 aa8□□□□□ -1.13
RTN4-215ENST00000491592 MRGPRX2Q96LB1 330 aa8□□□□□ -1.13
RTN4-215ENST00000491592 ZNF330Q9Y3S2 320 aaPredicted RBP8□□□□□ -1.13
RTN4-215ENST00000491592 SUPT5HO00267 1087 aaKnown RBP7.99□□□□□ -1.13
RTN4-215ENST00000491592 ZNF511Q8NB15 262 aa7.99□□□□□ -1.13
RTN4-215ENST00000491592 SENP2Q9HC62 589 aa7.99□□□□□ -1.13
RTN4-215ENST00000491592 POM121CA8CG34 1229 aa7.98□□□□□ -1.13
RTN4-215ENST00000491592 ZBBXA8MT70 800 aa7.98□□□□□ -1.13
RTN4-215ENST00000491592 FBXO45P0C2W1 286 aa7.98□□□□□ -1.13
RTN4-215ENST00000491592 NR1H3Q13133 447 aa7.98□□□□□ -1.13
RTN4-215ENST00000491592 PDXDC2PQ6P474 469 aa7.98□□□□□ -1.13
RTN4-215ENST00000491592 SH3BP5LQ7L8J4 393 aa7.98□□□□□ -1.13
RTN4-215ENST00000491592 BAP1Q92560 729 aa7.98□□□□□ -1.13
RTN4-215ENST00000491592 ATP13A2Q9NQ11 1180 aa7.98□□□□□ -1.13
RTN4-215ENST00000491592 ARID3CA6NKF2 412 aa7.97□□□□□ -1.13
RTN4-215ENST00000491592 WNT7BP56706 349 aa7.97□□□□□ -1.13
RTN4-215ENST00000491592 PTK2Q05397 1052 aa7.97□□□□□ -1.13
RTN4-215ENST00000491592 ARHGAP9Q9BRR9 750 aa7.97□□□□□ -1.13
RTN4-215ENST00000491592 GPSM3Q9Y4H4 160 aa7.97□□□□□ -1.13
RTN4-215ENST00000491592 J3QL48 77 aa7.96□□□□□ -1.14
RTN4-215ENST00000491592 NFX1Q12986 1120 aaKnown RBP7.96□□□□□ -1.14
RTN4-215ENST00000491592 SH3RF1Q7Z6J0 888 aa7.96□□□□□ -1.14
RTN4-215ENST00000491592 KIFC2Q96AC6 838 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms