RNA–Protein interactions for RNA: ENST00000491536.5

PLOD1-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, humanhuman

TSL 3

Gene PLOD1, Length 639 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD1-209ENST00000491536 AFF2P51816 1311 aa13.98□□□□□ -0.17
PLOD1-209ENST00000491536 WDR43Q15061 677 aaKnown RBP eCLIP13.98□□□□□ -0.17
PLOD1-209ENST00000491536 ZRANB1Q9UGI0 708 aa13.98□□□□□ -0.17
PLOD1-209ENST00000491536 TBX22Q9Y458 520 aa13.98□□□□□ -0.17
PLOD1-209ENST00000491536 CHD2O14647 1828 aaKnown RBP13.98□□□□□ -0.17
PLOD1-209ENST00000491536 TOPAZ1Q8N9V7 1692 aa13.98□□□□□ -0.17
PLOD1-209ENST00000491536 WASLO00401 505 aaPredicted RBP13.97□□□□□ -0.17
PLOD1-209ENST00000491536 QTRT2Q9H974 415 aaKnown RBP13.97□□□□□ -0.17
PLOD1-209ENST00000491536 CD163L1Q9NR16 1453 aa13.97□□□□□ -0.17
PLOD1-209ENST00000491536 SHPRHQ149N8 1683 aa13.97□□□□□ -0.17
PLOD1-209ENST00000491536 RBM6P78332 1123 aaKnown RBP13.96□□□□□ -0.17
PLOD1-209ENST00000491536 CDC42BPGQ6DT37 1551 aa13.96□□□□□ -0.18
PLOD1-209ENST00000491536 EP400Q96L91 3159 aa13.95□□□□□ -0.18
PLOD1-209ENST00000491536 ATF3P18847 181 aa13.95□□□□□ -0.18
PLOD1-209ENST00000491536 CADPS2Q86UW7 1296 aa13.95□□□□□ -0.18
PLOD1-209ENST00000491536 RGPD8O14715 1765 aaPredicted RBP13.95□□□□□ -0.18
PLOD1-209ENST00000491536 PTPRUQ92729 1446 aa13.95□□□□□ -0.18
PLOD1-209ENST00000491536 POLR3AO14802 1390 aaPredicted RBP13.95□□□□□ -0.18
PLOD1-209ENST00000491536 ROBO2Q9HCK4 1378 aa13.95□□□□□ -0.18
PLOD1-209ENST00000491536 PTCH1Q13635 1447 aa13.94□□□□□ -0.18
PLOD1-209ENST00000491536 NWD1Q149M9 1564 aa13.94□□□□□ -0.18
PLOD1-209ENST00000491536 PPIP5K1Q6PFW1 1433 aa13.94□□□□□ -0.18
PLOD1-209ENST00000491536 SMG6Q86US8 1419 aaKnown RBP13.94□□□□□ -0.18
PLOD1-209ENST00000491536 MAP2P11137 1827 aaKnown RBP13.94□□□□□ -0.18
PLOD1-209ENST00000491536 C19orf44Q9H6X5 657 aa13.93□□□□□ -0.18
PLOD1-209ENST00000491536 CABP1Q9NZU7 370 aa13.93□□□□□ -0.18
PLOD1-209ENST00000491536 PIK3R4Q99570 1358 aa13.93□□□□□ -0.18
PLOD1-209ENST00000491536 CFAP53Q96M91 514 aa13.92□□□□□ -0.18
PLOD1-209ENST00000491536 C8orf37Q96NL8 207 aa13.92□□□□□ -0.18
PLOD1-209ENST00000491536 NUDCQ9Y266 331 aa13.92□□□□□ -0.18
PLOD1-209ENST00000491536 AMOTL2Q9Y2J4 779 aa13.92□□□□□ -0.18
PLOD1-209ENST00000491536 RGS12O14924 1447 aa13.91□□□□□ -0.18
PLOD1-209ENST00000491536 NCOA3Q9Y6Q9 1424 aa13.91□□□□□ -0.18
PLOD1-209ENST00000491536 AHDC1Q5TGY3 1603 aaPredicted RBP13.91□□□□□ -0.18
PLOD1-209ENST00000491536 PDE3BQ13370 1112 aa13.91□□□□□ -0.18
PLOD1-209ENST00000491536 NUDT16Q96DE0 195 aaKnown RBP13.91□□□□□ -0.18
PLOD1-209ENST00000491536 ADAMTS8Q9UP79 889 aa13.91□□□□□ -0.18
PLOD1-209ENST00000491536 SUPT16HQ9Y5B9 1047 aaKnown RBP13.91□□□□□ -0.18
PLOD1-209ENST00000491536 FKBP8Q14318 412 aa13.9□□□□□ -0.18
PLOD1-209ENST00000491536 NGLY1Q96IV0 654 aa13.9□□□□□ -0.18
PLOD1-209ENST00000491536 FMN2Q9NZ56 1722 aa13.9□□□□□ -0.18
PLOD1-209ENST00000491536 TNNT2P45379 298 aaPredicted RBP13.89□□□□□ -0.19
PLOD1-209ENST00000491536 BRINP3Q76B58 766 aa13.89□□□□□ -0.19
PLOD1-209ENST00000491536 CCDC61Q9Y6R9 512 aa13.89□□□□□ -0.19
PLOD1-209ENST00000491536 EDC4Q6P2E9 1401 aaKnown RBP13.89□□□□□ -0.19
PLOD1-209ENST00000491536 NRKQ7Z2Y5 1582 aa13.88□□□□□ -0.19
PLOD1-209ENST00000491536 SENP3-EIF4A1A0A087X0R7 540 aa13.88□□□□□ -0.19
PLOD1-209ENST00000491536 GGNBP2Q9H3C7 697 aa13.88□□□□□ -0.19
PLOD1-209ENST00000491536 CPSF1Q10570 1443 aaKnown RBP13.88□□□□□ -0.19
PLOD1-209ENST00000491536 FYB1O15117 783 aa13.87□□□□□ -0.19
PLOD1-209ENST00000491536 LRRC59Q96AG4 307 aaKnown RBP13.87□□□□□ -0.19
PLOD1-209ENST00000491536 SALL2Q9Y467 1007 aaPredicted RBP13.87□□□□□ -0.19
PLOD1-209ENST00000491536 NALCNQ8IZF0 1738 aa13.87□□□□□ -0.19
PLOD1-209ENST00000491536 MTHFSP49914 203 aa13.86□□□□□ -0.19
PLOD1-209ENST00000491536 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
PLOD1-209ENST00000491536 PRR36Q9H6K5 1346 aa13.85□□□□□ -0.19
PLOD1-209ENST00000491536 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.84□□□□□ -0.19
PLOD1-209ENST00000491536 ADAMTS2O95450 1211 aa13.83□□□□□ -0.2
PLOD1-209ENST00000491536 CCDC125Q86Z20 511 aa13.83□□□□□ -0.2
PLOD1-209ENST00000491536 CCDC146Q8IYE0 955 aa13.82□□□□□ -0.2
PLOD1-209ENST00000491536 NGEFQ8N5V2 710 aa13.82□□□□□ -0.2
PLOD1-209ENST00000491536 ANKARQ7Z5J8 1434 aa13.81□□□□□ -0.2
PLOD1-209ENST00000491536 COL3A1P02461 1466 aaPredicted RBP13.81□□□□□ -0.2
PLOD1-209ENST00000491536 PLEKHG3A1L390 1219 aa13.81□□□□□ -0.2
PLOD1-209ENST00000491536 ERICH6BQ5W0A0 696 aa13.81□□□□□ -0.2
PLOD1-209ENST00000491536 USP21Q9UK80 565 aa13.8□□□□□ -0.2
PLOD1-209ENST00000491536 TRPC5Q9UL62 973 aaPredicted RBP13.8□□□□□ -0.2
PLOD1-209ENST00000491536 NUTM2FA1L443 756 aa13.79□□□□□ -0.2
PLOD1-209ENST00000491536 DDX17Q92841 729 aaKnown RBP13.79□□□□□ -0.2
PLOD1-209ENST00000491536 RUNDC1Q96C34 613 aa13.79□□□□□ -0.2
PLOD1-209ENST00000491536 COG3Q96JB2 828 aa13.79□□□□□ -0.2
PLOD1-209ENST00000491536 ACEP12821 1306 aa13.79□□□□□ -0.2
PLOD1-209ENST00000491536 APAF1O14727 1248 aa13.78□□□□□ -0.2
PLOD1-209ENST00000491536 NME9Q86XW9 330 aa13.78□□□□□ -0.2
PLOD1-209ENST00000491536 PELP1Q8IZL8 1130 aaKnown RBP13.78□□□□□ -0.2
PLOD1-209ENST00000491536 PNPLA6Q8IY17 1366 aa13.78□□□□□ -0.2
PLOD1-209ENST00000491536 USP6P35125 1406 aa13.78□□□□□ -0.2
PLOD1-209ENST00000491536 USP54Q70EL1 1684 aa13.77□□□□□ -0.21
PLOD1-209ENST00000491536 TTC21BQ7Z4L5 1316 aa13.77□□□□□ -0.21
PLOD1-209ENST00000491536 AATKQ6ZMQ8 1374 aa13.76□□□□□ -0.21
PLOD1-209ENST00000491536 DIAPH1O60610 1272 aaKnown RBP13.76□□□□□ -0.21
PLOD1-209ENST00000491536 U2AF1L5P0DN76 240 aaPredicted RBP13.76□□□□□ -0.21
PLOD1-209ENST00000491536 IRX6P78412 446 aaPredicted RBP13.76□□□□□ -0.21
PLOD1-209ENST00000491536 U2AF1Q01081 240 aaKnown RBP eCLIP13.76□□□□□ -0.21
PLOD1-209ENST00000491536 GOLGA2Q08379 1002 aa13.76□□□□□ -0.21
PLOD1-209ENST00000491536 CDCA7LQ96GN5 454 aa13.76□□□□□ -0.21
PLOD1-209ENST00000491536 DCCP43146 1447 aa13.75□□□□□ -0.21
PLOD1-209ENST00000491536 ADGRL3Q9HAR2 1447 aa13.75□□□□□ -0.21
PLOD1-209ENST00000491536 TTC21AQ8NDW8 1320 aa13.75□□□□□ -0.21
PLOD1-209ENST00000491536 ZNF521Q96K83 1311 aa13.75□□□□□ -0.21
PLOD1-209ENST00000491536 NGDNQ8NEJ9 315 aaKnown RBP13.75□□□□□ -0.21
PLOD1-209ENST00000491536 PNNQ9H307 717 aaKnown RBP13.75□□□□□ -0.21
PLOD1-209ENST00000491536 RNF123Q5XPI4 1314 aa13.74□□□□□ -0.21
PLOD1-209ENST00000491536 U2SURPO15042 1029 aaKnown RBP13.74□□□□□ -0.21
PLOD1-209ENST00000491536 FNBP4Q8N3X1 1017 aaPredicted RBP13.74□□□□□ -0.21
PLOD1-209ENST00000491536 RCAN3Q9UKA8 241 aa13.74□□□□□ -0.21
PLOD1-209ENST00000491536 PIK3C2AO00443 1686 aa13.74□□□□□ -0.21
PLOD1-209ENST00000491536 NHSL1Q5SYE7 1610 aa13.74□□□□□ -0.21
PLOD1-209ENST00000491536 MST1RQ04912 1400 aa13.73□□□□□ -0.21
PLOD1-209ENST00000491536 PMFBP1Q8TBY8 1022 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms