RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 SRPK2P78362 688 aaKnown RBP11.95□□□□□ -0.5
APP-216ENST00000491395 FAM98CQ17RN3 349 aaKnown RBP11.95□□□□□ -0.5
APP-216ENST00000491395 CABP2Q9NPB3 220 aa11.95□□□□□ -0.5
APP-216ENST00000491395 PRDM11Q9NQV5 511 aa11.95□□□□□ -0.5
APP-216ENST00000491395 A0A0G2JS52 829 aa11.94□□□□□ -0.5
APP-216ENST00000491395 ZC3H6P61129 1189 aaKnown RBP11.94□□□□□ -0.5
APP-216ENST00000491395 MYT1Q01538 1121 aa11.94□□□□□ -0.5
APP-216ENST00000491395 CHRNA2Q15822 529 aa11.94□□□□□ -0.5
APP-216ENST00000491395 KRT27Q7Z3Y8 459 aa11.94□□□□□ -0.5
APP-216ENST00000491395 POLR3AO14802 1390 aaPredicted RBP11.93□□□□□ -0.5
APP-216ENST00000491395 TRPM3Q9HCF6 1732 aaPredicted RBP11.93□□□□□ -0.5
APP-216ENST00000491395 KIAA0232Q92628 1395 aa11.92□□□□□ -0.5
APP-216ENST00000491395 ARHGEF28Q8N1W1 1705 aaKnown RBP11.92□□□□□ -0.5
APP-216ENST00000491395 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.92□□□□□ -0.5
APP-216ENST00000491395 DEFB132Q7Z7B7 95 aa11.92□□□□□ -0.5
APP-216ENST00000491395 ABTB2Q8N961 1025 aa11.92□□□□□ -0.5
APP-216ENST00000491395 ZRANB1Q9UGI0 708 aa11.92□□□□□ -0.5
APP-216ENST00000491395 SPATA31A5Q5VU36 1347 aa11.91□□□□□ -0.5
APP-216ENST00000491395 SPATA31A7Q8IWB4 1347 aa11.91□□□□□ -0.5
APP-216ENST00000491395 STRN4Q9NRL3 753 aa11.91□□□□□ -0.5
APP-216ENST00000491395 CABP1Q9NZU7 370 aa11.91□□□□□ -0.5
APP-216ENST00000491395 BLMP54132 1417 aaPredicted RBP11.91□□□□□ -0.5
APP-216ENST00000491395 ALS2Q96Q42 1657 aa11.91□□□□□ -0.5
APP-216ENST00000491395 FAM182BQ5T319 152 aa11.9□□□□□ -0.5
APP-216ENST00000491395 ABCA3Q99758 1704 aa11.89□□□□□ -0.51
APP-216ENST00000491395 KIAA1210Q9ULL0 1709 aa11.89□□□□□ -0.51
APP-216ENST00000491395 PPIP5K1Q6PFW1 1433 aa11.89□□□□□ -0.51
APP-216ENST00000491395 SF3B2Q13435 895 aaKnown RBP11.89□□□□□ -0.51
APP-216ENST00000491395 PLCH1Q4KWH8 1693 aa11.89□□□□□ -0.51
APP-216ENST00000491395 NLRP13Q86W25 1043 aa11.88□□□□□ -0.51
APP-216ENST00000491395 NWD2Q9ULI1 1742 aa11.88□□□□□ -0.51
APP-216ENST00000491395 SPATA31A1Q5TZJ5 1347 aa11.87□□□□□ -0.51
APP-216ENST00000491395 GCP02774 474 aa11.87□□□□□ -0.51
APP-216ENST00000491395 EVA1CP58658 441 aa11.87□□□□□ -0.51
APP-216ENST00000491395 USP35Q9P2H5 1018 aa11.87□□□□□ -0.51
APP-216ENST00000491395 ROCK2O75116 1388 aaKnown RBP11.87□□□□□ -0.51
APP-216ENST00000491395 COL14A1Q05707 1796 aaKnown RBP11.87□□□□□ -0.51
APP-216ENST00000491395 USP19O94966 1318 aa11.86□□□□□ -0.51
APP-216ENST00000491395 EVC2Q86UK5 1308 aa11.86□□□□□ -0.51
APP-216ENST00000491395 NLRP6P59044 892 aa11.86□□□□□ -0.51
APP-216ENST00000491395 LARP1Q6PKG0 1096 aaKnown RBP11.86□□□□□ -0.51
APP-216ENST00000491395 EP400Q96L91 3159 aa11.85□□□□□ -0.51
APP-216ENST00000491395 ZBTB7CA1YPR0 619 aa11.85□□□□□ -0.51
APP-216ENST00000491395 CPDO75976 1380 aa11.84□□□□□ -0.51
APP-216ENST00000491395 ITSN1Q15811 1721 aa11.84□□□□□ -0.51
APP-216ENST00000491395 NRAPQ86VF7 1730 aa11.84□□□□□ -0.51
APP-216ENST00000491395 TOPAZ1Q8N9V7 1692 aa11.84□□□□□ -0.51
APP-216ENST00000491395 BRWD3Q6RI45 1802 aa11.83□□□□□ -0.51
APP-216ENST00000491395 BRD4O60885 1362 aaPredicted RBP11.83□□□□□ -0.52
APP-216ENST00000491395 BAG6P46379 1132 aa11.83□□□□□ -0.52
APP-216ENST00000491395 EN1Q05925 392 aaPredicted RBP11.83□□□□□ -0.52
APP-216ENST00000491395 USP6P35125 1406 aa11.83□□□□□ -0.52
APP-216ENST00000491395 SSH2Q76I76 1423 aa11.83□□□□□ -0.52
APP-216ENST00000491395 CRYBG1Q9Y4K1 1723 aa11.83□□□□□ -0.52
APP-216ENST00000491395 CAMTA1Q9Y6Y1 1673 aa11.82□□□□□ -0.52
APP-216ENST00000491395 BARGINQ6ZT62 677 aa11.82□□□□□ -0.52
APP-216ENST00000491395 TCP11L2Q8N4U5 519 aa11.82□□□□□ -0.52
APP-216ENST00000491395 ZNF692Q9BU19 519 aaPredicted RBP11.81□□□□□ -0.52
APP-216ENST00000491395 CARD11Q9BXL7 1154 aa11.81□□□□□ -0.52
APP-216ENST00000491395 TTC21BQ7Z4L5 1316 aa11.81□□□□□ -0.52
APP-216ENST00000491395 TRPM1Q7Z4N2 1603 aa11.8□□□□□ -0.52
APP-216ENST00000491395 PHRF1Q9P1Y6 1649 aaKnown RBP11.8□□□□□ -0.52
APP-216ENST00000491395 PSDA5PKW4 1024 aaPredicted RBP11.8□□□□□ -0.52
APP-216ENST00000491395 TRIM37O94972 964 aa11.8□□□□□ -0.52
APP-216ENST00000491395 PDE3BQ13370 1112 aa11.8□□□□□ -0.52
APP-216ENST00000491395 FAM196AQ6ZSG2 479 aa11.8□□□□□ -0.52
APP-216ENST00000491395 NRKQ7Z2Y5 1582 aa11.79□□□□□ -0.52
APP-216ENST00000491395 QRICH2Q9H0J4 1663 aa11.79□□□□□ -0.52
APP-216ENST00000491395 SOX12O15370 315 aa11.79□□□□□ -0.52
APP-216ENST00000491395 AXIN2Q9Y2T1 843 aa11.79□□□□□ -0.52
APP-216ENST00000491395 TONSLQ96HA7 1378 aa11.79□□□□□ -0.52
APP-216ENST00000491395 SRCAPQ6ZRS2 3230 aa11.79□□□□□ -0.52
APP-216ENST00000491395 THSD7AQ9UPZ6 1657 aa11.78□□□□□ -0.52
APP-216ENST00000491395 EZH2Q15910 746 aaKnown RBP11.78□□□□□ -0.52
APP-216ENST00000491395 THRAP3Q9Y2W1 955 aaKnown RBP11.78□□□□□ -0.52
APP-216ENST00000491395 AATKQ6ZMQ8 1374 aa11.78□□□□□ -0.52
APP-216ENST00000491395 APBA3O96018 575 aa11.77□□□□□ -0.53
APP-216ENST00000491395 ARHGEF25Q86VW2 580 aa11.77□□□□□ -0.53
APP-216ENST00000491395 TMC1Q8TDI8 760 aa11.77□□□□□ -0.53
APP-216ENST00000491395 CAMKK2Q96RR4 588 aa11.77□□□□□ -0.53
APP-216ENST00000491395 KTN1Q86UP2 1357 aaKnown RBP11.77□□□□□ -0.53
APP-216ENST00000491395 CPSF1Q10570 1443 aaKnown RBP11.77□□□□□ -0.53
APP-216ENST00000491395 COL5A2P05997 1499 aaPredicted RBP11.76□□□□□ -0.53
APP-216ENST00000491395 TRIM26Q12899 539 aaPredicted RBP11.76□□□□□ -0.53
APP-216ENST00000491395 TOM1L2Q6ZVM7 507 aa11.76□□□□□ -0.53
APP-216ENST00000491395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.76□□□□□ -0.53
APP-216ENST00000491395 KCNH5Q8NCM2 988 aa11.76□□□□□ -0.53
APP-216ENST00000491395 TTC21AQ8NDW8 1320 aa11.76□□□□□ -0.53
APP-216ENST00000491395 SLIT3O75094 1523 aa11.76□□□□□ -0.53
APP-216ENST00000491395 R3HDM1Q15032 1099 aaKnown RBP11.75□□□□□ -0.53
APP-216ENST00000491395 SLC12A5Q9H2X9 1139 aa11.75□□□□□ -0.53
APP-216ENST00000491395 SBNO2Q9Y2G9 1366 aa11.75□□□□□ -0.53
APP-216ENST00000491395 CRB1P82279 1406 aa11.75□□□□□ -0.53
APP-216ENST00000491395 LMO7Q8WWI1 1683 aa11.75□□□□□ -0.53
APP-216ENST00000491395 NME9Q86XW9 330 aa11.74□□□□□ -0.53
APP-216ENST00000491395 DISP2A7MBM2 1401 aa11.73□□□□□ -0.53
APP-216ENST00000491395 CSB-PGBD3P0DP91 1061 aa11.73□□□□□ -0.53
APP-216ENST00000491395 WDR17Q8IZU2 1322 aa11.73□□□□□ -0.53
APP-216ENST00000491395 ST20-MTHFSA0A0A6YYL1 179 aa11.72□□□□□ -0.53
APP-216ENST00000491395 DDB1Q16531 1140 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms